RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 GOLGA6DP0CG33 693 aa12.47□□□□□ -0.41
SLIRP-209ENST00000557342 WNT3AP56704 352 aa12.47□□□□□ -0.41
SLIRP-209ENST00000557342 PTPRRQ15256 657 aa12.47□□□□□ -0.41
SLIRP-209ENST00000557342 CDKN3Q16667 212 aa12.47□□□□□ -0.41
SLIRP-209ENST00000557342 ANKRD20A2Q5SQ80 823 aa12.47□□□□□ -0.41
SLIRP-209ENST00000557342 TPRG1LQ5T0D9 272 aa12.47□□□□□ -0.41
SLIRP-209ENST00000557342 FAM182AQ5T1J6 154 aa12.47□□□□□ -0.41
SLIRP-209ENST00000557342 ANKRD20A1Q5TYW2 823 aa12.47□□□□□ -0.41
SLIRP-209ENST00000557342 ANKRD20A3Q5VUR7 823 aa12.47□□□□□ -0.41
SLIRP-209ENST00000557342 RAET1GQ6H3X3 334 aa12.47□□□□□ -0.41
SLIRP-209ENST00000557342 KDELC1Q6UW63 502 aa12.47□□□□□ -0.41
SLIRP-209ENST00000557342 KDM7AQ6ZMT4 941 aa12.47□□□□□ -0.41
SLIRP-209ENST00000557342 KDELC2Q7Z4H8 507 aa12.47□□□□□ -0.41
SLIRP-209ENST00000557342 PHACTR4Q8IZ21 702 aa12.47□□□□□ -0.41
SLIRP-209ENST00000557342 SLC25A45Q8N413 288 aa12.47□□□□□ -0.41
SLIRP-209ENST00000557342 FUBP1Q96AE4 644 aaKnown RBP12.47□□□□□ -0.41
SLIRP-209ENST00000557342 LRRC45Q96CN5 670 aa12.47□□□□□ -0.41
SLIRP-209ENST00000557342 AP2M1Q96CW1 435 aa12.47□□□□□ -0.41
SLIRP-209ENST00000557342 PDLIM2Q96JY6 352 aa12.47□□□□□ -0.41
SLIRP-209ENST00000557342 CNDP2Q96KP4 475 aaKnown RBP12.47□□□□□ -0.41
SLIRP-209ENST00000557342 SPATA13Q96N96 652 aa12.47□□□□□ -0.41
SLIRP-209ENST00000557342 C10orf88Q9H8K7 445 aa12.47□□□□□ -0.41
SLIRP-209ENST00000557342 ZFYVE1Q9HBF4 777 aa12.47□□□□□ -0.41
SLIRP-209ENST00000557342 RAD18Q9NS91 495 aa12.47□□□□□ -0.41
SLIRP-209ENST00000557342 EVA1BQ9NVM1 165 aa12.47□□□□□ -0.41
SLIRP-209ENST00000557342 GOLGA6AQ9NYA3 693 aa12.47□□□□□ -0.41
SLIRP-209ENST00000557342 NLGN3Q9NZ94 848 aa12.47□□□□□ -0.41
SLIRP-209ENST00000557342 UBP1Q9NZI7 540 aa12.47□□□□□ -0.41
SLIRP-209ENST00000557342 KLQ9UEF7 1012 aa12.47□□□□□ -0.41
SLIRP-209ENST00000557342 APOBEC3BQ9UH17 382 aaKnown RBP12.47□□□□□ -0.41
SLIRP-209ENST00000557342 AAR2Q9Y312 384 aaKnown RBP12.47□□□□□ -0.41
SLIRP-209ENST00000557342 ARID1BQ8NFD5 2236 aaPredicted RBP12.46□□□□□ -0.41
SLIRP-209ENST00000557342 CNOT1A5YKK6 2376 aaKnown RBP12.46□□□□□ -0.41
SLIRP-209ENST00000557342 LOC285095A0A1B0GVY8 99 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 C5orf60A6NFR6 353 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 ENC1O14682 589 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 TNFRSF10CO14798 259 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 SCAMP1O15126 338 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 AQP9O43315 295 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 TNFP01375 233 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 FTH1P19P0C7X4 201 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 MYCLP1P12525 358 aaPredicted RBP12.46□□□□□ -0.41
SLIRP-209ENST00000557342 CTSEP14091 401 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 HLA-DPA1P20036 260 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 GPR1P46091 355 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 SPINT3P49223 89 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 HK3P52790 923 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 SRP54P61011 504 aaKnown RBP12.46□□□□□ -0.41
SLIRP-209ENST00000557342 CCDC173Q0VFZ6 552 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 HEATR4Q86WZ0 1026 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 SLC13A5Q86YT5 568 aaPredicted RBP12.46□□□□□ -0.41
SLIRP-209ENST00000557342 HID1Q8IV36 788 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 SDR16C5Q8N3Y7 309 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 FSTL5Q8N475 847 aaPredicted RBP12.46□□□□□ -0.41
SLIRP-209ENST00000557342 ZNF548Q8NEK5 533 aaPredicted RBP12.46□□□□□ -0.41
SLIRP-209ENST00000557342 IPMKQ8NFU5 416 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 OR56A4Q8NGH8 313 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 OR4C6Q8NH72 309 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 SLC35B2Q8TB61 432 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 LMX1AQ8TE12 382 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 MAIP1Q8WWC4 291 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 MRGPRX2Q96LB1 330 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 SMIM14Q96QK8 99 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 FAM118BQ9BPY3 351 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 FSD1LQ9BXM9 530 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 TEX101Q9BY14 249 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 GPR63Q9BZJ6 419 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 CDH19Q9H159 772 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 ABCG8Q9H221 673 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 TRABDQ9H4I3 376 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 USP29Q9HBJ7 922 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 UCKL1Q9NWZ5 548 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 CD84Q9UIB8 345 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 KLF15Q9UIH9 416 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 ZNF711Q9Y462 761 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 DGKBQ9Y6T7 804 aa12.46□□□□□ -0.41
SLIRP-209ENST00000557342 PTPRBP23467 1997 aa12.45□□□□□ -0.42
SLIRP-209ENST00000557342 A0A0U1RQS6 177 aa12.45□□□□□ -0.42
SLIRP-209ENST00000557342 K7ESM1 405 aa12.45□□□□□ -0.42
SLIRP-209ENST00000557342 TPP1O14773 563 aa12.45□□□□□ -0.42
SLIRP-209ENST00000557342 FFAR2O15552 330 aa12.45□□□□□ -0.42
SLIRP-209ENST00000557342 FGF1P05230 155 aa12.45□□□□□ -0.42
SLIRP-209ENST00000557342 CDK4P11802 303 aa12.45□□□□□ -0.42
SLIRP-209ENST00000557342 MSNP26038 577 aaKnown RBP12.45□□□□□ -0.42
SLIRP-209ENST00000557342 PMLP29590 882 aa12.45□□□□□ -0.42
SLIRP-209ENST00000557342 STIP1P31948 543 aaKnown RBP12.45□□□□□ -0.42
SLIRP-209ENST00000557342 CDK3Q00526 305 aa12.45□□□□□ -0.42
SLIRP-209ENST00000557342 ELOCQ15369 112 aa12.45□□□□□ -0.42
SLIRP-209ENST00000557342 SLC1A5Q15758 541 aa12.45□□□□□ -0.42
SLIRP-209ENST00000557342 ALG11Q2TAA5 492 aa12.45□□□□□ -0.42
SLIRP-209ENST00000557342 PRRT3Q5FWE3 981 aa12.45□□□□□ -0.42
SLIRP-209ENST00000557342 ADAMTSL4Q6UY14 1074 aa12.45□□□□□ -0.42
SLIRP-209ENST00000557342 ARHGEF18Q6ZSZ5 1173 aa12.45□□□□□ -0.42
SLIRP-209ENST00000557342 LYSMD3Q7Z3D4 306 aa12.45□□□□□ -0.42
SLIRP-209ENST00000557342 TMC3Q7Z5M5 1100 aa12.45□□□□□ -0.42
SLIRP-209ENST00000557342 RBFAQ8N0V3 343 aa12.45□□□□□ -0.42
SLIRP-209ENST00000557342 CCDC110Q8TBZ0 833 aa12.45□□□□□ -0.42
SLIRP-209ENST00000557342 TSACCQ96A04 125 aaPredicted RBP12.45□□□□□ -0.42
SLIRP-209ENST00000557342 OXNAD1Q96HP4 312 aaPredicted RBP12.45□□□□□ -0.42
SLIRP-209ENST00000557342 FAM83DQ9H4H8 585 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms