RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.52□□□□□ -0.41
PSEN1-221ENST00000557293 CEACAM20Q6UY09 585 aa12.52□□□□□ -0.41
PSEN1-221ENST00000557293 STRADAQ7RTN6 431 aa12.52□□□□□ -0.41
PSEN1-221ENST00000557293 TMEM135Q86UB9 458 aa12.52□□□□□ -0.41
PSEN1-221ENST00000557293 TSEN2Q8NCE0 465 aaKnown RBP12.52□□□□□ -0.41
PSEN1-221ENST00000557293 TRIT1Q9H3H1 467 aaKnown RBP12.52□□□□□ -0.41
PSEN1-221ENST00000557293 UBA2Q9UBT2 640 aaPredicted RBP12.52□□□□□ -0.41
PSEN1-221ENST00000557293 VPS4AQ9UN37 437 aa12.52□□□□□ -0.41
PSEN1-221ENST00000557293 SLC17A4Q9Y2C5 497 aa12.52□□□□□ -0.41
PSEN1-221ENST00000557293 MAP4K5Q9Y4K4 846 aa12.52□□□□□ -0.41
PSEN1-221ENST00000557293 RPS6KL1Q9Y6S9 549 aa12.52□□□□□ -0.41
PSEN1-221ENST00000557293 ESPL1Q14674 2120 aa12.52□□□□□ -0.41
PSEN1-221ENST00000557293 CELSR2Q9HCU4 2923 aa12.51□□□□□ -0.41
PSEN1-221ENST00000557293 WIPF3A6NGB9 483 aa12.51□□□□□ -0.41
PSEN1-221ENST00000557293 PRAMEF11O60813 436 aa12.51□□□□□ -0.41
PSEN1-221ENST00000557293 CLDN1O95832 211 aa12.51□□□□□ -0.41
PSEN1-221ENST00000557293 IVLP07476 585 aa12.51□□□□□ -0.41
PSEN1-221ENST00000557293 MMEP08473 750 aa12.51□□□□□ -0.41
PSEN1-221ENST00000557293 EPHB2P29323 1055 aa12.51□□□□□ -0.41
PSEN1-221ENST00000557293 FASLGP48023 281 aa12.51□□□□□ -0.41
PSEN1-221ENST00000557293 MAP7Q14244 749 aa12.51□□□□□ -0.41
PSEN1-221ENST00000557293 ACOX1Q15067 660 aa12.51□□□□□ -0.41
PSEN1-221ENST00000557293 PARP15Q460N3 678 aa12.51□□□□□ -0.41
PSEN1-221ENST00000557293 SNAP47Q5SQN1 464 aa12.51□□□□□ -0.41
PSEN1-221ENST00000557293 WDR74Q6RFH5 385 aaPredicted RBP12.51□□□□□ -0.41
PSEN1-221ENST00000557293 KDELC2Q7Z4H8 507 aa12.51□□□□□ -0.41
PSEN1-221ENST00000557293 HEATR4Q86WZ0 1026 aa12.51□□□□□ -0.41
PSEN1-221ENST00000557293 TICAM1Q8IUC6 712 aa12.51□□□□□ -0.41
PSEN1-221ENST00000557293 CPT1CQ8TCG5 803 aa12.51□□□□□ -0.41
PSEN1-221ENST00000557293 RNF31Q96EP0 1072 aa12.51□□□□□ -0.41
PSEN1-221ENST00000557293 ZPBPQ9BS86 351 aa12.51□□□□□ -0.41
PSEN1-221ENST00000557293 PDCL3Q9H2J4 239 aa12.51□□□□□ -0.41
PSEN1-221ENST00000557293 LRRC19Q9H756 370 aa12.51□□□□□ -0.41
PSEN1-221ENST00000557293 PHPT1Q9NRX4 125 aaPredicted RBP12.51□□□□□ -0.41
PSEN1-221ENST00000557293 CUEDC1Q9NWM3 386 aaPredicted RBP12.51□□□□□ -0.41
PSEN1-221ENST00000557293 SIDT1Q9NXL6 827 aaKnown RBP12.51□□□□□ -0.41
PSEN1-221ENST00000557293 B4GALT6Q9UBX8 382 aa12.51□□□□□ -0.41
PSEN1-221ENST00000557293 SPENQ96T58 3664 aaKnown RBP12.51□□□□□ -0.41
PSEN1-221ENST00000557293 CENPEQ02224 2701 aa12.51□□□□□ -0.41
PSEN1-221ENST00000557293 TTLL8A6PVC2 850 aa12.5□□□□□ -0.41
PSEN1-221ENST00000557293 LSM8O95777 96 aaKnown RBP12.5□□□□□ -0.41
PSEN1-221ENST00000557293 CYP1A1P04798 512 aaPredicted RBP12.5□□□□□ -0.41
PSEN1-221ENST00000557293 SDC4P31431 198 aa12.5□□□□□ -0.41
PSEN1-221ENST00000557293 RFC1P35251 1148 aaPredicted RBP12.5□□□□□ -0.41
PSEN1-221ENST00000557293 CDK3Q00526 305 aa12.5□□□□□ -0.41
PSEN1-221ENST00000557293 PTP4A2Q12974 167 aa12.5□□□□□ -0.41
PSEN1-221ENST00000557293 ERV3-1Q14264 604 aa12.5□□□□□ -0.41
PSEN1-221ENST00000557293 PTPRRQ15256 657 aa12.5□□□□□ -0.41
PSEN1-221ENST00000557293 CNGA3Q16281 694 aa12.5□□□□□ -0.41
PSEN1-221ENST00000557293 NAA35Q5VZE5 725 aa12.5□□□□□ -0.41
PSEN1-221ENST00000557293 SLFN11Q7Z7L1 901 aa12.5□□□□□ -0.41
PSEN1-221ENST00000557293 SFRP1Q8N474 314 aa12.5□□□□□ -0.41
PSEN1-221ENST00000557293 SLC37A2Q8TED4 501 aa12.5□□□□□ -0.41
PSEN1-221ENST00000557293 FAM172AQ8WUF8 416 aa12.5□□□□□ -0.41
PSEN1-221ENST00000557293 SPOCK2Q92563 424 aa12.5□□□□□ -0.41
PSEN1-221ENST00000557293 NAA15Q9BXJ9 866 aaKnown RBP12.5□□□□□ -0.41
PSEN1-221ENST00000557293 TRIM55Q9BYV6 548 aa12.5□□□□□ -0.41
PSEN1-221ENST00000557293 SLC39A8Q9C0K1 460 aa12.5□□□□□ -0.41
PSEN1-221ENST00000557293 ATP13A3Q9H7F0 1226 aa12.5□□□□□ -0.41
PSEN1-221ENST00000557293 TNRC6AQ8NDV7 1962 aaKnown RBP12.5□□□□□ -0.41
PSEN1-221ENST00000557293 RP1L1Q8IWN7 2480 aaPredicted RBP12.5□□□□□ -0.41
PSEN1-221ENST00000557293 LRBAP50851 2863 aa12.5□□□□□ -0.41
PSEN1-221ENST00000557293 DNAJB5O75953 348 aa12.49□□□□□ -0.41
PSEN1-221ENST00000557293 SOD1P00441 154 aa12.49□□□□□ -0.41
PSEN1-221ENST00000557293 CHRNB2P17787 502 aa12.49□□□□□ -0.41
PSEN1-221ENST00000557293 MMP8P22894 467 aa12.49□□□□□ -0.41
PSEN1-221ENST00000557293 TEAD1P28347 426 aa12.49□□□□□ -0.41
PSEN1-221ENST00000557293 SERPINA4P29622 427 aa12.49□□□□□ -0.41
PSEN1-221ENST00000557293 ETV3P41162 512 aa12.49□□□□□ -0.41
PSEN1-221ENST00000557293 ACTR1BP42025 376 aa12.49□□□□□ -0.41
PSEN1-221ENST00000557293 ACTR1AP61163 376 aa12.49□□□□□ -0.41
PSEN1-221ENST00000557293 BCL2L1Q07817 233 aa12.49□□□□□ -0.41
PSEN1-221ENST00000557293 NSUN2Q08J23 767 aaKnown RBP eCLIP12.49□□□□□ -0.41
PSEN1-221ENST00000557293 BIRC2Q13490 618 aa12.49□□□□□ -0.41
PSEN1-221ENST00000557293 EIF2S3LQ2VIR3 472 aaKnown RBP12.49□□□□□ -0.41
PSEN1-221ENST00000557293 PYCR3Q53H96 274 aa12.49□□□□□ -0.41
PSEN1-221ENST00000557293 CFAP58Q5T655 872 aa12.49□□□□□ -0.41
PSEN1-221ENST00000557293 WDR59Q6PJI9 974 aa12.49□□□□□ -0.41
PSEN1-221ENST00000557293 RFLNAQ6ZTI6 216 aa12.49□□□□□ -0.41
PSEN1-221ENST00000557293 Q6ZVL8 140 aa12.49□□□□□ -0.41
PSEN1-221ENST00000557293 HSD11B1LQ7Z5J1 315 aa12.49□□□□□ -0.41
PSEN1-221ENST00000557293 APLFQ8IW19 511 aaPredicted RBP12.49□□□□□ -0.41
PSEN1-221ENST00000557293 FAM114A1Q8IWE2 563 aa12.49□□□□□ -0.41
PSEN1-221ENST00000557293 ESX1Q8N693 406 aa12.49□□□□□ -0.41
PSEN1-221ENST00000557293 NCSTNQ92542 709 aa12.49□□□□□ -0.41
PSEN1-221ENST00000557293 NUS1Q96E22 293 aa12.49□□□□□ -0.41
PSEN1-221ENST00000557293 DTD2Q96FN9 168 aa12.49□□□□□ -0.41
PSEN1-221ENST00000557293 MLXIPLQ9NP71 852 aa12.49□□□□□ -0.41
PSEN1-221ENST00000557293 CROTQ9UKG9 612 aa12.49□□□□□ -0.41
PSEN1-221ENST00000557293 FZD10Q9ULW2 581 aa12.49□□□□□ -0.41
PSEN1-221ENST00000557293 POLHQ9Y253 713 aa12.49□□□□□ -0.41
PSEN1-221ENST00000557293 TMEM98Q9Y2Y6 226 aa12.49□□□□□ -0.41
PSEN1-221ENST00000557293 PCYT1BQ9Y5K3 369 aaPredicted RBP12.49□□□□□ -0.41
PSEN1-221ENST00000557293 FHOD1Q9Y613 1164 aa12.49□□□□□ -0.41
PSEN1-221ENST00000557293 HIVEP3Q5T1R4 2406 aa12.48□□□□□ -0.41
PSEN1-221ENST00000557293 TTC24A2A3L6 582 aaPredicted RBP12.48□□□□□ -0.41
PSEN1-221ENST00000557293 POLR1CO15160 346 aaPredicted RBP12.48□□□□□ -0.41
PSEN1-221ENST00000557293 HTRA2O43464 458 aaPredicted RBP12.48□□□□□ -0.41
PSEN1-221ENST00000557293 RFPL1O75677 317 aa12.48□□□□□ -0.41
PSEN1-221ENST00000557293 SORBS2O94875 1100 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms