RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 CDX2Q99626 313 aaPredicted RBP6.18□□□□□ -1.42
CPSF2-205ENST00000556622 RAD9AQ99638 391 aa6.18□□□□□ -1.42
CPSF2-205ENST00000556622 HNRNPABQ99729 332 aaKnown RBP6.18□□□□□ -1.42
CPSF2-205ENST00000556622 FDXACB1Q9BRP7 624 aaPredicted RBP6.18□□□□□ -1.42
CPSF2-205ENST00000556622 EFHD1Q9BUP0 239 aa6.18□□□□□ -1.42
CPSF2-205ENST00000556622 SNRNP25Q9BV90 132 aaKnown RBP6.18□□□□□ -1.42
CPSF2-205ENST00000556622 CADM1Q9BY67 442 aaKnown RBP6.18□□□□□ -1.42
CPSF2-205ENST00000556622 SLC13A1Q9BZW2 595 aa6.18□□□□□ -1.42
CPSF2-205ENST00000556622 ILKAPQ9H0C8 392 aaPredicted RBP6.18□□□□□ -1.42
CPSF2-205ENST00000556622 TTYH1Q9H313 450 aaPredicted RBP6.18□□□□□ -1.42
CPSF2-205ENST00000556622 DENND2DQ9H6A0 471 aaPredicted RBP6.18□□□□□ -1.42
CPSF2-205ENST00000556622 SMYD3Q9H7B4 428 aa6.18□□□□□ -1.42
CPSF2-205ENST00000556622 POPDC2Q9HBU9 364 aa6.18□□□□□ -1.42
CPSF2-205ENST00000556622 EML4Q9HC35 981 aaKnown RBP6.18□□□□□ -1.42
CPSF2-205ENST00000556622 CNGB3Q9NQW8 809 aa6.18□□□□□ -1.42
CPSF2-205ENST00000556622 SNTG2Q9NY99 539 aa6.18□□□□□ -1.42
CPSF2-205ENST00000556622 TAS2R1Q9NYW7 299 aa6.18□□□□□ -1.42
CPSF2-205ENST00000556622 C6orf203Q9P0P8 240 aaPredicted RBP6.18□□□□□ -1.42
CPSF2-205ENST00000556622 SLC17A7Q9P2U7 560 aa6.18□□□□□ -1.42
CPSF2-205ENST00000556622 DSEQ9UL01 958 aa6.18□□□□□ -1.42
CPSF2-205ENST00000556622 PADI3Q9ULW8 664 aa6.18□□□□□ -1.42
CPSF2-205ENST00000556622 BACE2Q9Y5Z0 518 aa6.18□□□□□ -1.42
CPSF2-205ENST00000556622 SQORQ9Y6N5 450 aa6.18□□□□□ -1.42
CPSF2-205ENST00000556622 RANBP2P49792 3224 aaKnown RBP6.18□□□□□ -1.42
CPSF2-205ENST00000556622 TRBV23OR9-2A0A075B6M9 112 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 FAM237BA0A1B0GVD1 139 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 ARHGAP42A6NI28 874 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 CAPN14A8MX76 684 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 GOLGA8RI6L899 631 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 EEF2KO00418 725 aaKnown RBP6.17□□□□□ -1.42
CPSF2-205ENST00000556622 TSPAN1O60635 241 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 DGKIO75912 1065 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 CBX6O95503 412 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 HSPA4LO95757 839 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 FESP07332 822 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 CA3P07451 260 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 ALOX15P16050 662 aaPredicted RBP6.17□□□□□ -1.42
CPSF2-205ENST00000556622 WARSP23381 471 aaKnown RBP6.17□□□□□ -1.42
CPSF2-205ENST00000556622 PCSK1P29120 753 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 CRABP2P29373 138 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 HARS2P49590 506 aaKnown RBP6.17□□□□□ -1.42
CPSF2-205ENST00000556622 CLCN3P51790 818 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 SLC12A2P55011 1212 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 CDH8P55286 799 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 ABCE1P61221 599 aaKnown RBP6.17□□□□□ -1.42
CPSF2-205ENST00000556622 MGAT3Q09327 533 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 SCAPQ12770 1279 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 PRKAA1Q13131 559 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 RCN1Q15293 331 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 ZBTB6Q15916 424 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 DDR2Q16832 855 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 CDO1Q16878 200 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 ANO4Q32M45 955 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 SPATS1Q496A3 300 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 RARS2Q5T160 578 aaKnown RBP6.17□□□□□ -1.42
CPSF2-205ENST00000556622 MROH9Q5TGP6 573 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 TRIM68Q6AZZ1 485 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 TXNRD3NBQ6F5E7 133 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 KLC3Q6P597 504 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 SLC30A9Q6PML9 568 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 PACS1Q6VY07 963 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 PID1Q7Z2X4 250 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 CAND1Q86VP6 1230 aaKnown RBP6.17□□□□□ -1.42
CPSF2-205ENST00000556622 METTL23Q86XA0 190 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 MFN1Q8IWA4 741 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 SCML4Q8N228 414 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 ZNF276Q8N554 614 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 ARFGAP1Q8N6T3 406 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 LINC01465Q8N7H1 131 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 CELF2-AS1Q8N7Q2 184 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 DNAAF3Q8N9W5 541 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 COLGALT1Q8NBJ5 622 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 CCNYQ8ND76 341 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 ICA1LQ8NDH6 482 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 RP9Q8TA86 221 aaKnown RBP6.17□□□□□ -1.42
CPSF2-205ENST00000556622 ACTRT2Q8TDY3 377 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 ZFAND2BQ8WV99 257 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 POP5Q969H6 163 aaKnown RBP6.17□□□□□ -1.42
CPSF2-205ENST00000556622 TOP1MTQ969P6 601 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 ZNF669Q96BR6 464 aaPredicted RBP6.17□□□□□ -1.42
CPSF2-205ENST00000556622 PGAP3Q96FM1 320 aaPredicted RBP6.17□□□□□ -1.42
CPSF2-205ENST00000556622 TSPAN17Q96FV3 270 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 CERS2Q96G23 380 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 SERAC1Q96JX3 654 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 ZNF668Q96K58 619 aaPredicted RBP6.17□□□□□ -1.42
CPSF2-205ENST00000556622 CSPG4P5Q96PW8 444 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 YME1L1Q96TA2 773 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 RTKNQ9BST9 563 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 FTHL17Q9BXU8 183 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 DUSP16Q9BY84 665 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 MAGEB5Q9BZ81 275 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 PRDM12Q9H4Q4 367 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 AGO3Q9H9G7 860 aaKnown RBP6.17□□□□□ -1.42
CPSF2-205ENST00000556622 CERS4Q9HA82 394 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 KIF9Q9HAQ2 790 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 KCNK13Q9HB14 408 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 TNFRSF12AQ9NP84 129 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 C8orf4Q9NR00 106 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 CHST12Q9NRB3 414 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 DDX43Q9NXZ2 648 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms