RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 RAP1GAP2Q684P5 730 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 NAPEPLDQ6IQ20 393 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 FBXL22Q6P050 247 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 CASC4Q6P4E1 433 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 CYS1Q717R9 158 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 GPR149Q86SP6 731 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 C14orf80Q86SX3 495 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 TRABD2AQ86V40 505 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 SLC26A11Q86WA9 606 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 LRRC6Q86X45 466 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 CHSY1Q86X52 802 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 IGDCC3Q8IVU1 814 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 ARHGAP12Q8IWW6 846 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 CTAGE3PQ8IX95 158 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 TP53INP2Q8IXH6 220 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 SRRM1Q8IYB3 904 aaKnown RBP6.89□□□□□ -1.31
SLIRP-204ENST00000555890 DNAAF3Q8N9W5 541 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 DEFB124Q8NES8 71 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 BCAS4Q8TDM0 211 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 DEPDC1BQ8WUY9 529 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 CDKL2Q92772 493 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 FATE1Q969F0 183 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 AZIN2Q96A70 460 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 SGSM3Q96HU1 749 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 RPRD1AQ96P16 312 aaPredicted RBP6.89□□□□□ -1.31
SLIRP-204ENST00000555890 FCRL5Q96RD9 977 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 PAFAH2Q99487 392 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 IL12RB2Q99665 862 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 DHRS4Q9BTZ2 278 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 EDEM2Q9BV94 578 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 CEP41Q9BYV8 373 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 TRABDQ9H4I3 376 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 SLC32A1Q9H598 525 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 LRRC40Q9H9A6 602 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 RXFP1Q9HBX9 757 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 SSU72Q9NP77 194 aaKnown RBP6.89□□□□□ -1.31
SLIRP-204ENST00000555890 PPANQ9NQ55 473 aaKnown RBP6.89□□□□□ -1.31
SLIRP-204ENST00000555890 EURLQ9NYK6 297 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 MPP6Q9NZW5 540 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 SAMD15Q9P1V8 674 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 CTNNAL1Q9UBT7 734 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 IPO11Q9UI26 975 aaKnown RBP6.89□□□□□ -1.31
SLIRP-204ENST00000555890 NEU3Q9UQ49 428 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 YIPF1Q9Y548 306 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 ASB3Q9Y575 518 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 NYNRINQ9P2P1 1898 aaKnown RBP6.89□□□□□ -1.31
SLIRP-204ENST00000555890 ANAPC1Q9H1A4 1944 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 DENND4CQ5VZ89 1909 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 MTCL1Q9Y4B5 1905 aaKnown RBP6.88□□□□□ -1.31
SLIRP-204ENST00000555890 COL5A1P20908 1838 aaPredicted RBP6.88□□□□□ -1.31
SLIRP-204ENST00000555890 SLC35F4A4IF30 521 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 FAM47DPA6NHR8 397 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 B2RBV5 119 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 F5H423 210 aaPredicted RBP6.88□□□□□ -1.31
SLIRP-204ENST00000555890 NDUFAB1O14561 156 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 FAM107AO95990 144 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 MT-ND3P03897 115 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 POLBP06746 335 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 CTSAP10619 480 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 ESRRAP11474 423 aaPredicted RBP6.88□□□□□ -1.31
SLIRP-204ENST00000555890 HMGA1P17096 107 aaKnown RBP6.88□□□□□ -1.31
SLIRP-204ENST00000555890 HOXB4P17483 251 aaPredicted RBP6.88□□□□□ -1.31
SLIRP-204ENST00000555890 TACR2P21452 398 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 PRKCHP24723 683 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 MGAT1P26572 445 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 ITPKBP27987 946 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 GCAP28676 217 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 OR1E1P30953 314 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 CNR2P34972 360 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 CA8P35219 290 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 SERPINB9P50453 376 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 SESN2P58004 480 aaPredicted RBP6.88□□□□□ -1.31
SLIRP-204ENST00000555890 IL9RQ01113 521 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 PTSQ03393 145 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 IL10RBQ08334 325 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 TWF1Q12792 350 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 CDH17Q12864 832 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 ZBTB17Q13105 803 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 FZD5Q13467 585 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 MTM1Q13496 603 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 NAB1Q13506 487 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 HNRNPDQ14103 355 aaKnown RBP6.88□□□□□ -1.31
SLIRP-204ENST00000555890 POLD3Q15054 466 aaPredicted RBP6.88□□□□□ -1.31
SLIRP-204ENST00000555890 SEPT7Q16181 437 aaKnown RBP6.88□□□□□ -1.31
SLIRP-204ENST00000555890 ZSCAN26Q16670 478 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 KBTBD12Q3ZCT8 623 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 PARP15Q460N3 678 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 ZC3H12BQ5HYM0 836 aaKnown RBP6.88□□□□□ -1.31
SLIRP-204ENST00000555890 SPANXN3Q5MJ09 141 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 MARC1Q5VT66 337 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 ZNF449Q6P9G9 518 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 TMC5Q6UXY8 1006 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 UNC5AQ6ZN44 842 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 CCDC149Q6ZUS6 474 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 ZNF534Q76KX8 674 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 OTOP3Q7RTS5 596 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 DNAJB7Q7Z6W7 309 aaPredicted RBP6.88□□□□□ -1.31
SLIRP-204ENST00000555890 CPLX4Q7Z7G2 160 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 TAX1BP1Q86VP1 789 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 NLRP14Q86W24 1093 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms