RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 LIG3P49916 1009 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 ADPRHP54922 357 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 DCDC1P59894 354 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 MTAPQ13126 283 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 SGCGQ13326 291 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 STAT4Q14765 748 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 CNGA3Q16281 694 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 KYNUQ16719 465 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 SETMARQ53H47 684 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-220ENST00000555634 PIP5KL1Q5T9C9 394 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 LYPLAL1Q5VWZ2 237 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 CRTC1Q6UUV9 634 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 TMEM92Q6UXU6 159 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 TMEM135Q86UB9 458 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 FAM124AQ86V42 546 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 ZSWIM9Q86XI8 627 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 NRSN1Q8IZ57 195 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 ZNF687Q8N1G0 1237 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 OR2T34Q8NGX1 318 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 SCG3Q8WXD2 468 aaKnown RBP11.19□□□□□ -0.62
SHMT2-220ENST00000555634 ULK4Q96C45 1275 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 DNAJC1Q96KC8 554 aaKnown RBP11.19□□□□□ -0.62
SHMT2-220ENST00000555634 ZSCAN5AQ9BUG6 496 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 ZCCHC2Q9C0B9 1178 aaKnown RBP11.19□□□□□ -0.62
SHMT2-220ENST00000555634 CD320Q9NPF0 282 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 CATSPERZQ9NTU4 200 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 CRLS1Q9UJA2 301 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 SPO11Q9Y5K1 396 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 TP53BP1Q12888 1972 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-220ENST00000555634 PLXNB3Q9ULL4 1909 aa11.19□□□□□ -0.62
SHMT2-220ENST00000555634 EML5Q05BV3 1969 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 TBC1D3DA0A087WVF3 549 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 TBC1D3IA0A087WXS9 549 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 TBC1D3EA0A087X179 549 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 TBC1D3KA0A087X1G2 549 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 TCRBV9S1A1TA0A576 114 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 TBC1D3FA6NER0 549 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-220ENST00000555634 PRR23AA6NEV1 266 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 TBC1D3LB9A6J9 549 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 CLDN7O95471 211 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 SEMA4FO95754 770 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 TBC1D3HP0C7X1 549 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 CHRM1P11229 460 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-220ENST00000555634 RALBP11234 206 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 C6P13671 934 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 NMBRP28336 390 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 SSTR1P30872 391 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 MC4RP32245 332 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 DRD3P35462 400 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 TTPAP49638 278 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 TPMTP51580 245 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 STC1P52823 247 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 TMPRSS15P98073 1019 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 CACNG1Q06432 222 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 IHHQ14623 411 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 UAP1Q16222 522 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-220ENST00000555634 TMEM52BQ4KMG9 183 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 USP39Q53GS9 565 aaKnown RBP11.18□□□□□ -0.62
SHMT2-220ENST00000555634 ZRANB3Q5FWF4 1079 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 BEND6Q5SZJ8 279 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-220ENST00000555634 LGSNQ5TDP6 509 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 ALS2CLQ60I27 953 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 TBC1D3GQ6DHY5 549 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 ZNF470Q6ECI4 717 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 TBC1D3CQ6IPX1 549 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 SLC36A4Q6YBV0 504 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 CERS6Q6ZMG9 384 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 ZNF765Q7L2R6 523 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 CYP2U1Q7Z449 544 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 C11orf74Q86VG3 221 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 SLC26A11Q86WA9 606 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 TBC1D3Q8IZP1 549 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-220ENST00000555634 MDGA1Q8NFP4 955 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 OR4L1Q8NH43 312 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 MFSD3Q96ES6 412 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 CCDC68Q9H2F9 335 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 SEMA4AQ9H3S1 761 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 ACSS3Q9H6R3 686 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 LRRC4CQ9HCJ2 640 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 TREX1Q9NSU2 369 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 USP36Q9P275 1121 aaKnown RBP11.18□□□□□ -0.62
SHMT2-220ENST00000555634 NFKBIL1Q9UBC1 381 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-220ENST00000555634 ITM2BQ9Y287 266 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 FADS3Q9Y5Q0 445 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 KMT2EQ8IZD2 1858 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 MUC3AQ02505 3323 aa11.18□□□□□ -0.62
SHMT2-220ENST00000555634 FAM47DPA6NHR8 397 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 CFAP99D6REC4 459 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 H7C0S8 307 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 AREL1O15033 823 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 RNGTTO60942 597 aaKnown RBP11.17□□□□□ -0.62
SHMT2-220ENST00000555634 NUDT17P0C025 328 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 OGNP20774 298 aaKnown RBP11.17□□□□□ -0.62
SHMT2-220ENST00000555634 LHCGRP22888 699 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 CNTFP26441 200 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 CD6P30203 668 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 SPINT3P49223 89 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 ACVR1Q04771 509 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 RALGDSQ12967 914 aa11.17□□□□□ -0.62
SHMT2-220ENST00000555634 SLC29A2Q14542 456 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms