RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 CTNNAL1Q9UBT7 734 aa2.86□□□□□ -1.95
SRP54-207ENST00000555535 PADI1Q9ULC6 663 aa2.86□□□□□ -1.95
SRP54-207ENST00000555535 DCXO43602 365 aa2.85□□□□□ -1.95
SRP54-207ENST00000555535 MTA2O94776 668 aa2.85□□□□□ -1.95
SRP54-207ENST00000555535 SORBS2O94875 1100 aaKnown RBP2.85□□□□□ -1.95
SRP54-207ENST00000555535 CYC1P08574 325 aa2.85□□□□□ -1.95
SRP54-207ENST00000555535 PCNAP12004 261 aa2.85□□□□□ -1.95
SRP54-207ENST00000555535 ETFAP13804 333 aa2.85□□□□□ -1.95
SRP54-207ENST00000555535 SLC2A4P14672 509 aa2.85□□□□□ -1.95
SRP54-207ENST00000555535 DPEP1P16444 411 aa2.85□□□□□ -1.95
SRP54-207ENST00000555535 HOXA1P49639 335 aaPredicted RBP2.85□□□□□ -1.95
SRP54-207ENST00000555535 TERF1P54274 439 aa2.85□□□□□ -1.95
SRP54-207ENST00000555535 ACTR2P61160 394 aa2.85□□□□□ -1.95
SRP54-207ENST00000555535 GRIK3Q13003 919 aa2.85□□□□□ -1.95
SRP54-207ENST00000555535 ITGADQ13349 1161 aa2.85□□□□□ -1.95
SRP54-207ENST00000555535 CTF1Q16619 201 aa2.85□□□□□ -1.95
SRP54-207ENST00000555535 EIF2S3LQ2VIR3 472 aaKnown RBP2.85□□□□□ -1.95
SRP54-207ENST00000555535 CCSAPQ6IQ19 270 aaPredicted RBP2.85□□□□□ -1.95
SRP54-207ENST00000555535 RGMBQ6NW40 437 aa2.85□□□□□ -1.95
SRP54-207ENST00000555535 SLC27A1Q6PCB7 646 aa2.85□□□□□ -1.95
SRP54-207ENST00000555535 SLC36A4Q6YBV0 504 aa2.85□□□□□ -1.95
SRP54-207ENST00000555535 KCTD8Q6ZWB6 473 aa2.85□□□□□ -1.95
SRP54-207ENST00000555535 TAOK1Q7L7X3 1001 aa2.85□□□□□ -1.95
SRP54-207ENST00000555535 MOGAT3Q86VF5 341 aa2.85□□□□□ -1.95
SRP54-207ENST00000555535 TMEM57Q8N5G2 664 aa2.85□□□□□ -1.95
SRP54-207ENST00000555535 SCCPDHQ8NBX0 429 aa2.85□□□□□ -1.95
SRP54-207ENST00000555535 TMEM190Q8WZ59 177 aa2.85□□□□□ -1.95
SRP54-207ENST00000555535 ZNF653Q96CK0 615 aa2.85□□□□□ -1.95
SRP54-207ENST00000555535 CCDC136Q96JN2 1154 aa2.85□□□□□ -1.95
SRP54-207ENST00000555535 PCYT2Q99447 389 aa2.85□□□□□ -1.95
SRP54-207ENST00000555535 NUF2Q9BZD4 464 aa2.85□□□□□ -1.95
SRP54-207ENST00000555535 MROH8Q9H579 483 aa2.85□□□□□ -1.95
SRP54-207ENST00000555535 RCOR1Q9UKL0 485 aa2.85□□□□□ -1.95
SRP54-207ENST00000555535 FAF1Q9UNN5 650 aaPredicted RBP2.85□□□□□ -1.95
SRP54-207ENST00000555535 GDAQ9Y2T3 454 aa2.85□□□□□ -1.95
SRP54-207ENST00000555535 STON1Q9Y6Q2 735 aa2.85□□□□□ -1.95
SRP54-207ENST00000555535 SH2D7A6NKC9 451 aaPredicted RBP2.84□□□□□ -1.95
SRP54-207ENST00000555535 AKR1B15C9JRZ8 316 aaPredicted RBP2.84□□□□□ -1.95
SRP54-207ENST00000555535 F5H423 210 aaPredicted RBP2.84□□□□□ -1.95
SRP54-207ENST00000555535 H7C423 109 aa2.84□□□□□ -1.95
SRP54-207ENST00000555535 TCERG1O14776 1098 aaKnown RBP2.84□□□□□ -1.95
SRP54-207ENST00000555535 ANP32CO43423 234 aa2.84□□□□□ -1.95
SRP54-207ENST00000555535 CD58P19256 250 aa2.84□□□□□ -1.95
SRP54-207ENST00000555535 AGAP20933 346 aa2.84□□□□□ -1.95
SRP54-207ENST00000555535 CORO1AP31146 461 aaKnown RBP2.84□□□□□ -1.95
SRP54-207ENST00000555535 USP8P40818 1118 aa2.84□□□□□ -1.95
SRP54-207ENST00000555535 CLCNKAP51800 687 aa2.84□□□□□ -1.95
SRP54-207ENST00000555535 ISL1P61371 349 aa2.84□□□□□ -1.95
SRP54-207ENST00000555535 YWHAZP63104 245 aaKnown RBP2.84□□□□□ -1.95
SRP54-207ENST00000555535 POSTNQ15063 836 aa2.84□□□□□ -1.95
SRP54-207ENST00000555535 PDSS1Q5T2R2 415 aa2.84□□□□□ -1.95
SRP54-207ENST00000555535 GPATCH4Q5T3I0 446 aaKnown RBP2.84□□□□□ -1.95
SRP54-207ENST00000555535 SYCP2LQ5T4T6 812 aa2.84□□□□□ -1.95
SRP54-207ENST00000555535 SFMBT2Q5VUG0 894 aa2.84□□□□□ -1.95
SRP54-207ENST00000555535 C1orf228Q6PIY5 440 aa2.84□□□□□ -1.95
SRP54-207ENST00000555535 FAM160B2Q86V87 743 aa2.84□□□□□ -1.95
SRP54-207ENST00000555535 RNF113BQ8IZP6 322 aaKnown RBP2.84□□□□□ -1.95
SRP54-207ENST00000555535 DSELQ8IZU8 1212 aa2.84□□□□□ -1.95
SRP54-207ENST00000555535 TAAR8Q969N4 342 aa2.84□□□□□ -1.95
SRP54-207ENST00000555535 SH3KBP1Q96B97 665 aa2.84□□□□□ -1.95
SRP54-207ENST00000555535 POM121L2Q96KW2 1035 aa2.84□□□□□ -1.95
SRP54-207ENST00000555535 PLCB1Q9NQ66 1216 aa2.84□□□□□ -1.95
SRP54-207ENST00000555535 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.84□□□□□ -1.95
SRP54-207ENST00000555535 KIF17Q9P2E2 1029 aa2.84□□□□□ -1.95
SRP54-207ENST00000555535 FEM1BQ9UK73 627 aa2.84□□□□□ -1.95
SRP54-207ENST00000555535 OR2W1Q9Y3N9 320 aa2.84□□□□□ -1.95
SRP54-207ENST00000555535 KIAA1210Q9ULL0 1709 aa2.84□□□□□ -1.96
SRP54-207ENST00000555535 VWA3AA6NCI4 1184 aa2.83□□□□□ -1.96
SRP54-207ENST00000555535 PEX12O00623 359 aa2.83□□□□□ -1.96
SRP54-207ENST00000555535 DCTP40126 519 aa2.83□□□□□ -1.96
SRP54-207ENST00000555535 HNRNPH2P55795 449 aaKnown RBP2.83□□□□□ -1.96
SRP54-207ENST00000555535 TRIM14Q14142 442 aa2.83□□□□□ -1.96
SRP54-207ENST00000555535 NAA25Q14CX7 972 aa2.83□□□□□ -1.96
SRP54-207ENST00000555535 C2orf68Q2NKX9 166 aa2.83□□□□□ -1.96
SRP54-207ENST00000555535 HSP90AB2PQ58FF8 381 aa2.83□□□□□ -1.96
SRP54-207ENST00000555535 ZNF667Q5HYK9 610 aa2.83□□□□□ -1.96
SRP54-207ENST00000555535 HIST2H2BDQ6DRA6 164 aa2.83□□□□□ -1.96
SRP54-207ENST00000555535 TRNP1Q6NT89 227 aa2.83□□□□□ -1.96
SRP54-207ENST00000555535 CCDC174Q6PII3 467 aa2.83□□□□□ -1.96
SRP54-207ENST00000555535 FBXO46Q6PJ61 603 aaPredicted RBP2.83□□□□□ -1.96
SRP54-207ENST00000555535 ASB18Q6ZVZ8 466 aa2.83□□□□□ -1.96
SRP54-207ENST00000555535 SLC35F3Q8IY50 421 aa2.83□□□□□ -1.96
SRP54-207ENST00000555535 CEP70Q8NHQ1 597 aa2.83□□□□□ -1.96
SRP54-207ENST00000555535 MAGEC3Q8TD91 643 aa2.83□□□□□ -1.96
SRP54-207ENST00000555535 PPM1EQ8WY54 764 aa2.83□□□□□ -1.96
SRP54-207ENST00000555535 ZNF570Q96NI8 536 aa2.83□□□□□ -1.96
SRP54-207ENST00000555535 VGLL1Q99990 258 aa2.83□□□□□ -1.96
SRP54-207ENST00000555535 MCRIP2Q9BUT9 160 aaKnown RBP2.83□□□□□ -1.96
SRP54-207ENST00000555535 MMP25Q9NPA2 562 aa2.83□□□□□ -1.96
SRP54-207ENST00000555535 SNTG1Q9NSN8 517 aa2.83□□□□□ -1.96
SRP54-207ENST00000555535 CARD8Q9Y2G2 431 aa2.83□□□□□ -1.96
SRP54-207ENST00000555535 AMDHD2Q9Y303 409 aa2.83□□□□□ -1.96
SRP54-207ENST00000555535 RRP7AQ9Y3A4 280 aaKnown RBP2.83□□□□□ -1.96
SRP54-207ENST00000555535 CTAGE9A4FU28 777 aa2.82□□□□□ -1.96
SRP54-207ENST00000555535 SMIM1B2RUZ4 78 aa2.82□□□□□ -1.96
SRP54-207ENST00000555535 IFNL4K9M1U5 179 aa2.82□□□□□ -1.96
SRP54-207ENST00000555535 KLK10O43240 276 aa2.82□□□□□ -1.96
SRP54-207ENST00000555535 MMP2P08253 660 aa2.82□□□□□ -1.96
SRP54-207ENST00000555535 CTAGE8P0CG41 777 aa2.82□□□□□ -1.96
SRP54-207ENST00000555535 GNL1P36915 607 aaPredicted RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms