RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 TLCD1Q96CP7 247 aa17.65■□□□□ 0.42
PSEN1-212ENST00000555254 MTBPQ96DY7 904 aa17.65■□□□□ 0.42
PSEN1-212ENST00000555254 CPNE1Q99829 537 aa17.65■□□□□ 0.42
PSEN1-212ENST00000555254 FAM126AQ9BYI3 521 aaPredicted RBP17.65■□□□□ 0.42
PSEN1-212ENST00000555254 IARS2Q9NSE4 1012 aaKnown RBP17.65■□□□□ 0.42
PSEN1-212ENST00000555254 TREX1Q9NSU2 369 aa17.65■□□□□ 0.42
PSEN1-212ENST00000555254 CACNA2D2Q9NY47 1150 aa17.65■□□□□ 0.42
PSEN1-212ENST00000555254 SENP1Q9P0U3 644 aa17.65■□□□□ 0.42
PSEN1-212ENST00000555254 THAP10Q9P2Z0 257 aaPredicted RBP17.65■□□□□ 0.42
PSEN1-212ENST00000555254 PKP3Q9Y446 797 aa17.65■□□□□ 0.42
PSEN1-212ENST00000555254 PCDHGA2Q9Y5H1 932 aa17.65■□□□□ 0.42
PSEN1-212ENST00000555254 DNAH14Q0VDD8 3507 aa17.64■□□□□ 0.41
PSEN1-212ENST00000555254 SLC7A4O43246 635 aa17.64■□□□□ 0.41
PSEN1-212ENST00000555254 LDB2O43679 373 aa17.64■□□□□ 0.41
PSEN1-212ENST00000555254 RPP40O75818 363 aaKnown RBP17.64■□□□□ 0.41
PSEN1-212ENST00000555254 CHRM1P11229 460 aaPredicted RBP17.64■□□□□ 0.41
PSEN1-212ENST00000555254 CTPS1P17812 591 aa17.64■□□□□ 0.41
PSEN1-212ENST00000555254 GCAP28676 217 aa17.64■□□□□ 0.41
PSEN1-212ENST00000555254 GP5P40197 560 aa17.64■□□□□ 0.41
PSEN1-212ENST00000555254 DGKEP52429 567 aa17.64■□□□□ 0.41
PSEN1-212ENST00000555254 ZNF234Q14588 700 aa17.64■□□□□ 0.41
PSEN1-212ENST00000555254 CRY1Q16526 586 aa17.64■□□□□ 0.41
PSEN1-212ENST00000555254 HNRNPA1L2Q32P51 320 aaKnown RBP17.64■□□□□ 0.41
PSEN1-212ENST00000555254 ARSIQ5FYB1 569 aa17.64■□□□□ 0.41
PSEN1-212ENST00000555254 NEPROQ6NW34 567 aa17.64■□□□□ 0.41
PSEN1-212ENST00000555254 ASCL5Q7RTU5 278 aa17.64■□□□□ 0.41
PSEN1-212ENST00000555254 LONP2Q86WA8 852 aa17.64■□□□□ 0.41
PSEN1-212ENST00000555254 UNC5BQ8IZJ1 945 aa17.64■□□□□ 0.41
PSEN1-212ENST00000555254 PGBD3Q8N328 593 aa17.64■□□□□ 0.41
PSEN1-212ENST00000555254 CAMKK1Q8N5S9 505 aa17.64■□□□□ 0.41
PSEN1-212ENST00000555254 GRIN3AQ8TCU5 1115 aa17.64■□□□□ 0.41
PSEN1-212ENST00000555254 HCAR2Q8TDS4 363 aa17.64■□□□□ 0.41
PSEN1-212ENST00000555254 PTPRN2Q92932 1015 aa17.64■□□□□ 0.41
PSEN1-212ENST00000555254 ZNF778Q96MU6 729 aa17.64■□□□□ 0.41
PSEN1-212ENST00000555254 KLHL32Q96NJ5 620 aa17.64■□□□□ 0.41
PSEN1-212ENST00000555254 POLMQ9NP87 494 aaPredicted RBP17.64■□□□□ 0.41
PSEN1-212ENST00000555254 SMYD2Q9NRG4 433 aa17.64■□□□□ 0.41
PSEN1-212ENST00000555254 CTNNAL1Q9UBT7 734 aa17.64■□□□□ 0.41
PSEN1-212ENST00000555254 SLC2A6Q9UGQ3 507 aa17.64■□□□□ 0.41
PSEN1-212ENST00000555254 SPO11Q9Y5K1 396 aa17.64■□□□□ 0.41
PSEN1-212ENST00000555254 ARL5AQ9Y689 179 aa17.64■□□□□ 0.41
PSEN1-212ENST00000555254 DMXL1Q9Y485 3027 aa17.63■□□□□ 0.41
PSEN1-212ENST00000555254 PIAS1O75925 651 aa17.63■□□□□ 0.41
PSEN1-212ENST00000555254 HOXB2P14652 356 aa17.63■□□□□ 0.41
PSEN1-212ENST00000555254 HNRNPLP14866 589 aaKnown RBP eCLIP17.63■□□□□ 0.41
PSEN1-212ENST00000555254 HPDP32754 393 aaPredicted RBP17.63■□□□□ 0.41
PSEN1-212ENST00000555254 SPRP35270 261 aaPredicted RBP17.63■□□□□ 0.41
PSEN1-212ENST00000555254 HADHAP40939 763 aa17.63■□□□□ 0.41
PSEN1-212ENST00000555254 NBL1P41271 181 aa17.63■□□□□ 0.41
PSEN1-212ENST00000555254 ID4P47928 161 aa17.63■□□□□ 0.41
PSEN1-212ENST00000555254 TMPRSS15P98073 1019 aa17.63■□□□□ 0.41
PSEN1-212ENST00000555254 ILF2Q12905 390 aaKnown RBP17.63■□□□□ 0.41
PSEN1-212ENST00000555254 TEDDM1Q5T9Z0 273 aa17.63■□□□□ 0.41
PSEN1-212ENST00000555254 ANO7Q6IWH7 933 aa17.63■□□□□ 0.41
PSEN1-212ENST00000555254 STRA8Q7Z7C7 330 aa17.63■□□□□ 0.41
PSEN1-212ENST00000555254 SDCCAG8Q86SQ7 713 aaPredicted RBP17.63■□□□□ 0.41
PSEN1-212ENST00000555254 LMNTD2Q8IXW0 634 aa17.63■□□□□ 0.41
PSEN1-212ENST00000555254 NELL1Q92832 810 aa17.63■□□□□ 0.41
PSEN1-212ENST00000555254 HDAC10Q969S8 669 aa17.63■□□□□ 0.41
PSEN1-212ENST00000555254 NLE1Q9NVX2 485 aaPredicted RBP17.63■□□□□ 0.41
PSEN1-212ENST00000555254 ZNF711Q9Y462 761 aa17.63■□□□□ 0.41
PSEN1-212ENST00000555254 KCTD3Q9Y597 815 aa17.63■□□□□ 0.41
PSEN1-212ENST00000555254 STON1Q9Y6Q2 735 aa17.63■□□□□ 0.41
PSEN1-212ENST00000555254 A0A0J9YYE9 177 aa17.62■□□□□ 0.41
PSEN1-212ENST00000555254 TCRBV21S2A2A0A5A6 115 aa17.62■□□□□ 0.41
PSEN1-212ENST00000555254 AXIN1O15169 862 aa17.62■□□□□ 0.41
PSEN1-212ENST00000555254 PFDN6O15212 129 aa17.62■□□□□ 0.41
PSEN1-212ENST00000555254 LEFTY1O75610 366 aa17.62■□□□□ 0.41
PSEN1-212ENST00000555254 TRBC1P01850 177 aa17.62■□□□□ 0.41
PSEN1-212ENST00000555254 SLC4A1P02730 911 aa17.62■□□□□ 0.41
PSEN1-212ENST00000555254 PRKCGP05129 697 aa17.62■□□□□ 0.41
PSEN1-212ENST00000555254 CYP2A6P11509 494 aaPredicted RBP17.62■□□□□ 0.41
PSEN1-212ENST00000555254 NR1D1P20393 614 aa17.62■□□□□ 0.41
PSEN1-212ENST00000555254 HOXA6P31267 233 aa17.62■□□□□ 0.41
PSEN1-212ENST00000555254 CSE1LP55060 971 aaKnown RBP17.62■□□□□ 0.41
PSEN1-212ENST00000555254 DNAJC3Q13217 504 aa17.62■□□□□ 0.41
PSEN1-212ENST00000555254 SRSF5Q13243 272 aaKnown RBP17.62■□□□□ 0.41
PSEN1-212ENST00000555254 ZNF805Q5CZA5 627 aa17.62■□□□□ 0.41
PSEN1-212ENST00000555254 PACS1Q6VY07 963 aa17.62■□□□□ 0.41
PSEN1-212ENST00000555254 WDR5BQ86VZ2 330 aa17.62■□□□□ 0.41
PSEN1-212ENST00000555254 SRRM1Q8IYB3 904 aaKnown RBP17.62■□□□□ 0.41
PSEN1-212ENST00000555254 CYP4X1Q8N118 509 aa17.62■□□□□ 0.41
PSEN1-212ENST00000555254 STK40Q8N2I9 435 aa17.62■□□□□ 0.41
PSEN1-212ENST00000555254 ZBTB44Q8NCP5 570 aa17.62■□□□□ 0.41
PSEN1-212ENST00000555254 TMIEQ8NEW7 156 aa17.62■□□□□ 0.41
PSEN1-212ENST00000555254 OR4K2Q8NGD2 314 aa17.62■□□□□ 0.41
PSEN1-212ENST00000555254 HMGB4Q8WW32 186 aa17.62■□□□□ 0.41
PSEN1-212ENST00000555254 SPOCK2Q92563 424 aa17.62■□□□□ 0.41
PSEN1-212ENST00000555254 ECHDC3Q96DC8 303 aa17.62■□□□□ 0.41
PSEN1-212ENST00000555254 DNAJC1Q96KC8 554 aaKnown RBP17.62■□□□□ 0.41
PSEN1-212ENST00000555254 SMC6Q96SB8 1091 aa17.62■□□□□ 0.41
PSEN1-212ENST00000555254 DKK3Q9UBP4 350 aa17.62■□□□□ 0.41
PSEN1-212ENST00000555254 INVSQ9Y283 1065 aa17.62■□□□□ 0.41
PSEN1-212ENST00000555254 ACTL7BQ9Y614 415 aa17.62■□□□□ 0.41
PSEN1-212ENST00000555254 ACACBO00763 2458 aa17.62■□□□□ 0.41
PSEN1-212ENST00000555254 CHD8Q9HCK8 2581 aa17.62■□□□□ 0.41
PSEN1-212ENST00000555254 CHD6Q8TD26 2715 aa17.61■□□□□ 0.41
PSEN1-212ENST00000555254 MED19A0JLT2 244 aaPredicted RBP17.61■□□□□ 0.41
PSEN1-212ENST00000555254 CAPN8A6NHC0 703 aa17.61■□□□□ 0.41
PSEN1-212ENST00000555254 BUD23O43709 281 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms