RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 XKR5Q6UX68 686 aa10.71□□□□□ -0.69
MTHFD1-210ENST00000555252 CCDC117Q8IWD4 279 aaPredicted RBP10.71□□□□□ -0.69
MTHFD1-210ENST00000555252 CENPLQ8N0S6 344 aaPredicted RBP10.71□□□□□ -0.69
MTHFD1-210ENST00000555252 MINDY1Q8N5J2 469 aa10.71□□□□□ -0.69
MTHFD1-210ENST00000555252 SNX31Q8N9S9 440 aa10.71□□□□□ -0.69
MTHFD1-210ENST00000555252 PPP1R13LQ8WUF5 828 aa10.71□□□□□ -0.69
MTHFD1-210ENST00000555252 C17orf50Q8WW18 174 aa10.71□□□□□ -0.69
MTHFD1-210ENST00000555252 S100ZQ8WXG8 99 aa10.71□□□□□ -0.69
MTHFD1-210ENST00000555252 TANKQ92844 425 aa10.71□□□□□ -0.69
MTHFD1-210ENST00000555252 ATXN7L3BQ96GX2 97 aa10.71□□□□□ -0.69
MTHFD1-210ENST00000555252 MARK4Q96L34 752 aa10.71□□□□□ -0.69
MTHFD1-210ENST00000555252 MYRFLQ96LU7 910 aa10.71□□□□□ -0.69
MTHFD1-210ENST00000555252 ZFP42Q96MM3 310 aa10.71□□□□□ -0.69
MTHFD1-210ENST00000555252 INTS10Q9NVR2 710 aaKnown RBP10.71□□□□□ -0.69
MTHFD1-210ENST00000555252 PIH1D1Q9NWS0 290 aaKnown RBP10.71□□□□□ -0.69
MTHFD1-210ENST00000555252 SPATA7Q9P0W8 599 aa10.71□□□□□ -0.69
MTHFD1-210ENST00000555252 GMIPQ9P107 970 aa10.71□□□□□ -0.69
MTHFD1-210ENST00000555252 XPR1Q9UBH6 696 aa10.71□□□□□ -0.69
MTHFD1-210ENST00000555252 OR12D3Q9UGF7 316 aa10.71□□□□□ -0.69
MTHFD1-210ENST00000555252 DSEQ9UL01 958 aa10.71□□□□□ -0.69
MTHFD1-210ENST00000555252 AAR2Q9Y312 384 aaKnown RBP10.71□□□□□ -0.69
MTHFD1-210ENST00000555252 TTC24A2A3L6 582 aaPredicted RBP10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 CACNG3O60359 315 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 GPC4O75487 556 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 GNAO1P09471 354 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 NFKB1P19838 968 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 ATP6V1B2P21281 511 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 CD68P34810 354 aaPredicted RBP10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 STX1BP61266 288 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 RALGDSQ12967 914 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 BNIP3Q12983 259 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 ATP1A4Q13733 1029 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 NDUFA5Q16718 116 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 TRIM16LQ309B1 348 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 DEPDC1Q5TB30 811 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 OGFOD2Q6N063 350 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 CYP2R1Q6VVX0 501 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 MRPL10Q7Z7H8 261 aaKnown RBP10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 SLC15A4Q8N697 577 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 PAPD5Q8NDF8 572 aaKnown RBP10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 TRPV3Q8NET8 790 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 GPR78Q96P69 363 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 ACBD6Q9BR61 282 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 MLPHQ9BV36 600 aaPredicted RBP10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 KIFC1Q9BW19 673 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 TKTL2Q9H0I9 626 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 IARS2Q9NSE4 1012 aaKnown RBP10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 FLRT1Q9NZU1 646 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 CPA4Q9UI42 421 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 ZNF639Q9UID6 485 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 ST3GAL5Q9UNP4 418 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 DOLKQ9UPQ8 538 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 SAC3D1A6NKF1 404 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 ACOX3O15254 700 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 STMN1P16949 149 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 CCNCP24863 283 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 EIF2B2P49770 351 aaKnown RBP10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 CLCNKBP51801 687 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 SLC7A2P52569 658 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 BEX3Q00994 111 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 MAPRE1Q15691 268 aaKnown RBP10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 BRMS1LQ5PSV4 323 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 RBM48Q5RL73 367 aaKnown RBP10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 TSTD2Q5T7W7 516 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 BROXQ5VW32 411 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 BHLHA9Q7RTU4 235 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 GPRIN1Q7Z2K8 1008 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 PTAR1Q7Z6K3 402 aaPredicted RBP10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 SLC22A9Q8IVM8 553 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 TP53INP2Q8IXH6 220 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 TBC1D21Q8IYX1 336 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 SFRP1Q8N474 314 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 NPWQ8N729 165 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 NETO2Q8NC67 525 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 TSPEARQ8WU66 669 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 KCTD4Q8WVF5 259 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 GAD1Q99259 594 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 MTG1Q9BT17 334 aaPredicted RBP10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 HMG20AQ9NP66 347 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 CCDC167Q9P0B6 97 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 MYLKQ15746 1914 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 MIA3Q5JRA6 1907 aa10.7□□□□□ -0.7
MTHFD1-210ENST00000555252 COL4A4P53420 1690 aaPredicted RBP10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 CLDN25C9JDP6 229 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 GPR182O15218 404 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 FGF10O15520 208 aaPredicted RBP10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 ANXA9O76027 345 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 LRIG2O94898 1065 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 CYP11A1P05108 521 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 CD247P20963 164 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 CCR10P46092 362 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 ADARB1P78563 741 aaKnown RBP10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 TRAF2Q12933 501 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 CYBRD1Q53TN4 286 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 PCID2Q5JVF3 399 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 FAM171BQ6P995 826 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 FKBP9P1Q75LS8 142 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 TFAP2DQ7Z6R9 452 aa10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 PTCD2Q8WV60 388 aaKnown RBP10.69□□□□□ -0.7
MTHFD1-210ENST00000555252 SOCS4Q8WXH5 440 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms