RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 FAM159BA6NKW6 160 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 K7ESF4 209 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 AREL1O15033 823 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 STX2P32856 288 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 MMP12P39900 470 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 CDKN1CP49918 316 aaPredicted RBP10.76□□□□□ -0.69
TDP1-211ENST00000555178 TTMPQ5BVD1 217 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 LRIG3Q6UXM1 1119 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 ERN2Q76MJ5 926 aaKnown RBP10.76□□□□□ -0.69
TDP1-211ENST00000555178 LDB1Q86U70 411 aaPredicted RBP10.76□□□□□ -0.69
TDP1-211ENST00000555178 KCNMB4Q86W47 210 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 HDAC10Q969S8 669 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 SIPA1Q96FS4 1042 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 TBATAQ96M53 351 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 NELL2Q99435 816 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 NAT9Q9BTE0 207 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 MRM3Q9HC36 420 aaKnown RBP10.76□□□□□ -0.69
TDP1-211ENST00000555178 C11orf16Q9NQ32 467 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 IARS2Q9NSE4 1012 aaKnown RBP10.76□□□□□ -0.69
TDP1-211ENST00000555178 DKK3Q9UBP4 350 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 CD84Q9UIB8 345 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 THADAQ6YHU6 1953 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 PLXND1Q9Y4D7 1925 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 MAGEB16A2A368 324 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 RASGRF2O14827 1237 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 MMP20O60882 483 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 SPAG6O75602 509 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 TSHRP16473 764 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 TPMTP51580 245 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 FGL2Q14314 439 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 TAF1AQ15573 450 aaPredicted RBP10.76□□□□□ -0.69
TDP1-211ENST00000555178 SEL1L3Q68CR1 1132 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 KCTD16Q68DU8 428 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 FBXL19Q6PCT2 694 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 TRMT11Q7Z4G4 463 aaKnown RBP10.76□□□□□ -0.69
TDP1-211ENST00000555178 CCNJLQ8IV13 435 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 DENND6AQ8IWF6 608 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 MAML2Q8IZL2 1156 aaPredicted RBP10.76□□□□□ -0.69
TDP1-211ENST00000555178 PGBD3Q8N328 593 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 SYNPOQ8N3V7 929 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 PTCD2Q8WV60 388 aaKnown RBP10.76□□□□□ -0.69
TDP1-211ENST00000555178 LRIG1Q96JA1 1093 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 SH3GL2Q99962 352 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 OSBPL1AQ9BXW6 950 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 GPR63Q9BZJ6 419 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 CAAP1Q9H8G2 361 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 MAGEE1Q9HCI5 957 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 EURLQ9NYK6 297 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 MARCH4Q9P2E8 410 aaPredicted RBP10.76□□□□□ -0.69
TDP1-211ENST00000555178 FKBPLQ9UIM3 349 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 ZFR2Q9UPR6 939 aaKnown RBP10.76□□□□□ -0.69
TDP1-211ENST00000555178 FADS3Q9Y5Q0 445 aa10.76□□□□□ -0.69
TDP1-211ENST00000555178 CCDC162PA2VCL2 907 aa10.75□□□□□ -0.69
TDP1-211ENST00000555178 GAPDHSO14556 408 aaPredicted RBP10.75□□□□□ -0.69
TDP1-211ENST00000555178 ATP8B1O43520 1251 aa10.75□□□□□ -0.69
TDP1-211ENST00000555178 AOC1P19801 751 aa10.75□□□□□ -0.69
TDP1-211ENST00000555178 C5AR1P21730 350 aa10.75□□□□□ -0.69
TDP1-211ENST00000555178 RPL26P61254 145 aaKnown RBP10.75□□□□□ -0.69
TDP1-211ENST00000555178 MPP1Q00013 466 aa10.75□□□□□ -0.69
TDP1-211ENST00000555178 SEMA3AQ14563 771 aa10.75□□□□□ -0.69
TDP1-211ENST00000555178 STAT4Q14765 748 aa10.75□□□□□ -0.69
TDP1-211ENST00000555178 GRM3Q14832 879 aa10.75□□□□□ -0.69
TDP1-211ENST00000555178 TMED2Q15363 201 aa10.75□□□□□ -0.69
TDP1-211ENST00000555178 BRAT1Q6PJG6 821 aa10.75□□□□□ -0.69
TDP1-211ENST00000555178 PTAR1Q7Z6K3 402 aaPredicted RBP10.75□□□□□ -0.69
TDP1-211ENST00000555178 CBARPQ8N350 705 aaPredicted RBP10.75□□□□□ -0.69
TDP1-211ENST00000555178 SPEM1Q8N4L4 309 aa10.75□□□□□ -0.69
TDP1-211ENST00000555178 GANCQ8TET4 914 aa10.75□□□□□ -0.69
TDP1-211ENST00000555178 DCAKDQ8WVC6 231 aa10.75□□□□□ -0.69
TDP1-211ENST00000555178 SPOCK2Q92563 424 aa10.75□□□□□ -0.69
TDP1-211ENST00000555178 ATXN7L3BQ96GX2 97 aa10.75□□□□□ -0.69
TDP1-211ENST00000555178 CYTH2Q99418 400 aa10.75□□□□□ -0.69
TDP1-211ENST00000555178 HDAC8Q9BY41 377 aa10.75□□□□□ -0.69
TDP1-211ENST00000555178 FAM96AQ9H5X1 160 aa10.75□□□□□ -0.69
TDP1-211ENST00000555178 VPS18Q9P253 973 aa10.75□□□□□ -0.69
TDP1-211ENST00000555178 BCCIPQ9P287 314 aaKnown RBP eCLIP10.75□□□□□ -0.69
TDP1-211ENST00000555178 CYP8B1Q9UNU6 501 aa10.75□□□□□ -0.69
TDP1-211ENST00000555178 RPL26L1Q9UNX3 145 aaKnown RBP10.75□□□□□ -0.69
TDP1-211ENST00000555178 SLCO1B1Q9Y6L6 691 aa10.75□□□□□ -0.69
TDP1-211ENST00000555178 FAM47DPA6NHR8 397 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 C1QTNF3-AMACRE9PGA6 284 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 CRTAMO95727 393 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 GOT2P00505 430 aaKnown RBP10.74□□□□□ -0.69
TDP1-211ENST00000555178 DNTTP04053 509 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 ETV3P41162 512 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 RPS9P46781 194 aaKnown RBP10.74□□□□□ -0.69
TDP1-211ENST00000555178 LIG3P49916 1009 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 NEK3P51956 506 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 EIF3BP55884 814 aaKnown RBP10.74□□□□□ -0.69
TDP1-211ENST00000555178 PPP2CBP62714 309 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 PPP2CAP67775 309 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 MGAT5Q09328 741 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 CTBP1Q13363 440 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 BMPR2Q13873 1038 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 KLHL38Q2WGJ6 581 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 TEDDM1Q5T9Z0 273 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 KIAA0930Q6ICG6 404 aaPredicted RBP10.74□□□□□ -0.69
TDP1-211ENST00000555178 LIPIQ6XZB0 460 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 Q6ZVL8 140 aa10.74□□□□□ -0.69
TDP1-211ENST00000555178 USP45Q70EL2 814 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms