RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 C2orf71A6NGG8 1288 aa16.58■□□□□ 0.25
PCNX1-209ENST00000554879 TRIM16O95361 564 aa16.58■□□□□ 0.25
PCNX1-209ENST00000554879 CSKP41240 450 aa16.58■□□□□ 0.25
PCNX1-209ENST00000554879 CARTPTQ16568 116 aa16.58■□□□□ 0.25
PCNX1-209ENST00000554879 GSTA3Q16772 222 aa16.58■□□□□ 0.25
PCNX1-209ENST00000554879 TRAF7Q6Q0C0 670 aa16.58■□□□□ 0.25
PCNX1-209ENST00000554879 GID8Q9NWU2 228 aa16.58■□□□□ 0.25
PCNX1-209ENST00000554879 TBX21Q9UL17 535 aa16.58■□□□□ 0.25
PCNX1-209ENST00000554879 ANPEPP15144 967 aa16.58■□□□□ 0.24
PCNX1-209ENST00000554879 NAGLUP54802 743 aa16.58■□□□□ 0.24
PCNX1-209ENST00000554879 MRPS15P82914 257 aaKnown RBP16.58■□□□□ 0.24
PCNX1-209ENST00000554879 ITGADQ13349 1161 aa16.58■□□□□ 0.24
PCNX1-209ENST00000554879 TCTN1Q2MV58 587 aa16.58■□□□□ 0.24
PCNX1-209ENST00000554879 MSANTD2Q6P1R3 559 aa16.58■□□□□ 0.24
PCNX1-209ENST00000554879 PSRC1Q6PGN9 363 aaPredicted RBP16.58■□□□□ 0.24
PCNX1-209ENST00000554879 CMTR2Q8IYT2 770 aaKnown RBP16.58■□□□□ 0.24
PCNX1-209ENST00000554879 CMTM8Q8IZV2 173 aa16.58■□□□□ 0.24
PCNX1-209ENST00000554879 GDPD5Q8WTR4 605 aa16.58■□□□□ 0.24
PCNX1-209ENST00000554879 SMG7Q92540 1137 aaKnown RBP16.58■□□□□ 0.24
PCNX1-209ENST00000554879 ARL5AQ9Y689 179 aa16.58■□□□□ 0.24
PCNX1-209ENST00000554879 CEP350Q5VT06 3117 aa16.58■□□□□ 0.24
PCNX1-209ENST00000554879 S100A1P23297 94 aa16.58■□□□□ 0.24
PCNX1-209ENST00000554879 SLC1A6P48664 564 aa16.58■□□□□ 0.24
PCNX1-209ENST00000554879 RNF38Q9H0F5 515 aa16.58■□□□□ 0.24
PCNX1-209ENST00000554879 CATSPERZQ9NTU4 200 aa16.58■□□□□ 0.24
PCNX1-209ENST00000554879 IGSF6O95976 241 aa16.57■□□□□ 0.24
PCNX1-209ENST00000554879 MPOP05164 745 aa16.57■□□□□ 0.24
PCNX1-209ENST00000554879 FGF1P05230 155 aa16.57■□□□□ 0.24
PCNX1-209ENST00000554879 GSTT2P0CG29 244 aa16.57■□□□□ 0.24
PCNX1-209ENST00000554879 GSTT2BP0CG30 244 aa16.57■□□□□ 0.24
PCNX1-209ENST00000554879 C21orf59P57076 290 aa16.57■□□□□ 0.24
PCNX1-209ENST00000554879 NKX3-2P78367 333 aa16.57■□□□□ 0.24
PCNX1-209ENST00000554879 NAB1Q13506 487 aa16.57■□□□□ 0.24
PCNX1-209ENST00000554879 ARHGAP12Q8IWW6 846 aa16.57■□□□□ 0.24
PCNX1-209ENST00000554879 ABCG8Q9H221 673 aa16.57■□□□□ 0.24
PCNX1-209ENST00000554879 CIDEBQ9UHD4 219 aa16.57■□□□□ 0.24
PCNX1-209ENST00000554879 FAM159BA6NKW6 160 aa16.57■□□□□ 0.24
PCNX1-209ENST00000554879 HLA-DPA1P20036 260 aa16.57■□□□□ 0.24
PCNX1-209ENST00000554879 SERINC3Q13530 473 aa16.57■□□□□ 0.24
PCNX1-209ENST00000554879 C10orf107Q8IVU9 208 aa16.57■□□□□ 0.24
PCNX1-209ENST00000554879 PBXIP1Q96AQ6 731 aa16.57■□□□□ 0.24
PCNX1-209ENST00000554879 TRIM43Q96BQ3 446 aaPredicted RBP16.57■□□□□ 0.24
PCNX1-209ENST00000554879 HTATIP2Q9BUP3 242 aa16.57■□□□□ 0.24
PCNX1-209ENST00000554879 CEP44Q9C0F1 390 aa16.57■□□□□ 0.24
PCNX1-209ENST00000554879 HACD3Q9P035 362 aa16.57■□□□□ 0.24
PCNX1-209ENST00000554879 CDH3P22223 829 aa16.57■□□□□ 0.24
PCNX1-209ENST00000554879 RPL5P46777 297 aaKnown RBP16.57■□□□□ 0.24
PCNX1-209ENST00000554879 KYAT3Q6YP21 454 aaKnown RBP16.57■□□□□ 0.24
PCNX1-209ENST00000554879 ACAD11Q709F0 780 aa16.57■□□□□ 0.24
PCNX1-209ENST00000554879 DDIASQ8IXT1 998 aa16.57■□□□□ 0.24
PCNX1-209ENST00000554879 EFCAB3Q8N7B9 438 aa16.57■□□□□ 0.24
PCNX1-209ENST00000554879 OR13C4Q8NGS5 318 aa16.57■□□□□ 0.24
PCNX1-209ENST00000554879 RAD9AQ99638 391 aa16.57■□□□□ 0.24
PCNX1-209ENST00000554879 RBBP8Q99708 897 aa16.57■□□□□ 0.24
PCNX1-209ENST00000554879 CASS4Q9NQ75 786 aa16.57■□□□□ 0.24
PCNX1-209ENST00000554879 TRMT6Q9UJA5 497 aaKnown RBP16.57■□□□□ 0.24
PCNX1-209ENST00000554879 GPC6Q9Y625 555 aaPredicted RBP16.57■□□□□ 0.24
PCNX1-209ENST00000554879 MEI4A8MW99 385 aa16.56■□□□□ 0.24
PCNX1-209ENST00000554879 SKIV2LQ15477 1246 aaKnown RBP16.56■□□□□ 0.24
PCNX1-209ENST00000554879 UMODL1-AS1Q8N2C9 162 aa16.56■□□□□ 0.24
PCNX1-209ENST00000554879 OR52K2Q8NGK3 314 aa16.56■□□□□ 0.24
PCNX1-209ENST00000554879 OR6Y1Q8NGX8 325 aa16.56■□□□□ 0.24
PCNX1-209ENST00000554879 TSGA13Q96PP4 275 aa16.56■□□□□ 0.24
PCNX1-209ENST00000554879 RHOJQ9H4E5 214 aa16.56■□□□□ 0.24
PCNX1-209ENST00000554879 MAN1C1Q9NR34 630 aa16.56■□□□□ 0.24
PCNX1-209ENST00000554879 PLA2G4CQ9UP65 541 aa16.56■□□□□ 0.24
PCNX1-209ENST00000554879 C1orf232A0A0U1RR37 186 aa16.56■□□□□ 0.24
PCNX1-209ENST00000554879 INSIG1O15503 277 aa16.56■□□□□ 0.24
PCNX1-209ENST00000554879 NDST3O95803 873 aa16.56■□□□□ 0.24
PCNX1-209ENST00000554879 MZF1P28698 734 aaPredicted RBP16.56■□□□□ 0.24
PCNX1-209ENST00000554879 TPD52P55327 224 aaPredicted RBP16.56■□□□□ 0.24
PCNX1-209ENST00000554879 RING1Q06587 406 aa16.56■□□□□ 0.24
PCNX1-209ENST00000554879 RAB33AQ14088 237 aa16.56■□□□□ 0.24
PCNX1-209ENST00000554879 RNF43Q68DV7 783 aa16.56■□□□□ 0.24
PCNX1-209ENST00000554879 TREML1Q86YW5 311 aa16.56■□□□□ 0.24
PCNX1-209ENST00000554879 HAUS8Q9BT25 410 aa16.56■□□□□ 0.24
PCNX1-209ENST00000554879 CFHR5Q9BXR6 569 aa16.56■□□□□ 0.24
PCNX1-209ENST00000554879 ABCB8Q9NUT2 735 aa16.56■□□□□ 0.24
PCNX1-209ENST00000554879 TMEM216Q9P0N5 145 aa16.56■□□□□ 0.24
PCNX1-209ENST00000554879 PRR23AA6NEV1 266 aa16.56■□□□□ 0.24
PCNX1-209ENST00000554879 TRIM13O60858 407 aa16.56■□□□□ 0.24
PCNX1-209ENST00000554879 TRMUO75648 421 aaKnown RBP16.56■□□□□ 0.24
PCNX1-209ENST00000554879 CHN2P52757 468 aa16.56■□□□□ 0.24
PCNX1-209ENST00000554879 OCRLQ01968 901 aa16.56■□□□□ 0.24
PCNX1-209ENST00000554879 LRRC73Q5JTD7 316 aa16.56■□□□□ 0.24
PCNX1-209ENST00000554879 BEND5Q7L4P6 421 aa16.56■□□□□ 0.24
PCNX1-209ENST00000554879 GRASPQ7Z6J2 395 aaPredicted RBP16.56■□□□□ 0.24
PCNX1-209ENST00000554879 DYRK4Q9NR20 520 aa16.56■□□□□ 0.24
PCNX1-209ENST00000554879 GMEB1Q9Y692 573 aa16.56■□□□□ 0.24
PCNX1-209ENST00000554879 CCDC85CA6NKD9 419 aa16.56■□□□□ 0.24
PCNX1-209ENST00000554879 EDF1O60869 148 aaKnown RBP16.56■□□□□ 0.24
PCNX1-209ENST00000554879 PTPN2P17706 415 aa16.56■□□□□ 0.24
PCNX1-209ENST00000554879 GNAZP19086 355 aa16.56■□□□□ 0.24
PCNX1-209ENST00000554879 PRKCHP24723 683 aa16.56■□□□□ 0.24
PCNX1-209ENST00000554879 CLVS1Q8IUQ0 354 aaPredicted RBP16.56■□□□□ 0.24
PCNX1-209ENST00000554879 C12orf76Q8N812 135 aaPredicted RBP16.56■□□□□ 0.24
PCNX1-209ENST00000554879 USP13Q92995 863 aaPredicted RBP16.56■□□□□ 0.24
PCNX1-209ENST00000554879 SLC22A12Q96S37 553 aa16.56■□□□□ 0.24
PCNX1-209ENST00000554879 ACE2Q9BYF1 805 aaPredicted RBP16.56■□□□□ 0.24
PCNX1-209ENST00000554879 ILKAPQ9H0C8 392 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms