RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 FGGP02679 453 aa12.89□□□□□ -0.35
MTHFD1-208ENST00000554739 PIRTP0C851 137 aa12.89□□□□□ -0.35
MTHFD1-208ENST00000554739 PSMB4P28070 264 aa12.89□□□□□ -0.35
MTHFD1-208ENST00000554739 TEAD1P28347 426 aa12.89□□□□□ -0.35
MTHFD1-208ENST00000554739 STIP1P31948 543 aaKnown RBP12.89□□□□□ -0.35
MTHFD1-208ENST00000554739 CHRNA4P43681 627 aa12.89□□□□□ -0.35
MTHFD1-208ENST00000554739 GDF10P55107 478 aa12.89□□□□□ -0.35
MTHFD1-208ENST00000554739 HNRNPKP61978 463 aaKnown RBP eCLIP12.89□□□□□ -0.35
MTHFD1-208ENST00000554739 NFATC4Q14934 902 aa12.89□□□□□ -0.35
MTHFD1-208ENST00000554739 TRIP6Q15654 476 aaKnown RBP12.89□□□□□ -0.35
MTHFD1-208ENST00000554739 CCNG2Q16589 344 aa12.89□□□□□ -0.35
MTHFD1-208ENST00000554739 PARP6Q2NL67 630 aa12.89□□□□□ -0.35
MTHFD1-208ENST00000554739 ZNF569Q5MCW4 686 aa12.89□□□□□ -0.35
MTHFD1-208ENST00000554739 RANBP10Q6VN20 620 aa12.89□□□□□ -0.35
MTHFD1-208ENST00000554739 NYAP1Q6ZVC0 841 aa12.89□□□□□ -0.35
MTHFD1-208ENST00000554739 ZNF765Q7L2R6 523 aa12.89□□□□□ -0.35
MTHFD1-208ENST00000554739 LYSMD3Q7Z3D4 306 aa12.89□□□□□ -0.35
MTHFD1-208ENST00000554739 TMC3Q7Z5M5 1100 aa12.89□□□□□ -0.35
MTHFD1-208ENST00000554739 KLHDC8BQ8IXV7 354 aa12.89□□□□□ -0.35
MTHFD1-208ENST00000554739 IPMKQ8NFU5 416 aa12.89□□□□□ -0.35
MTHFD1-208ENST00000554739 AP2M1Q96CW1 435 aa12.89□□□□□ -0.35
MTHFD1-208ENST00000554739 RTP4Q96DX8 246 aa12.89□□□□□ -0.35
MTHFD1-208ENST00000554739 WDR24Q96S15 920 aa12.89□□□□□ -0.35
MTHFD1-208ENST00000554739 LGR4Q9BXB1 951 aa12.89□□□□□ -0.35
MTHFD1-208ENST00000554739 TEX101Q9BY14 249 aa12.89□□□□□ -0.35
MTHFD1-208ENST00000554739 ZFYVE1Q9HBF4 777 aa12.89□□□□□ -0.35
MTHFD1-208ENST00000554739 CD84Q9UIB8 345 aa12.89□□□□□ -0.35
MTHFD1-208ENST00000554739 PYCARDQ9ULZ3 195 aa12.89□□□□□ -0.35
MTHFD1-208ENST00000554739 SHOC2Q9UQ13 582 aa12.89□□□□□ -0.35
MTHFD1-208ENST00000554739 AAR2Q9Y312 384 aaKnown RBP12.89□□□□□ -0.35
MTHFD1-208ENST00000554739 SPAARA0A1B0GVQ0 90 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 TMEM202A6NGA9 273 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 CACNB4O00305 520 aaPredicted RBP12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 AURKAO14965 403 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 KIF5CO60282 957 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 CEP104O60308 925 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 METTL18O95568 372 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 SOD1P00441 154 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 AGTP01019 485 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 GIMD1P0DJR0 217 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 TSHRP16473 764 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 JUNDP17535 347 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 HTR1BP28222 390 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 ADRA1AP35348 466 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 SPINT3P49223 89 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 GEMP55040 296 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 KIAA1024LP59773 190 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 SIM1P81133 766 aaPredicted RBP12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 CCDC173Q0VFZ6 552 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 PRPSAP1Q14558 356 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 SLC1A5Q15758 541 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 ALG11Q2TAA5 492 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 N4BP2L1Q5TBK1 243 aaPredicted RBP12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 KCTD16Q68DU8 428 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 ENPP7Q6UWV6 458 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 ADAMTSL4Q6UY14 1074 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 GLRX5Q86SX6 157 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 SLC35F6Q8N357 371 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 SLC25A41Q8N5S1 370 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 EID2Q8N6I1 236 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 CCHCR1Q8TD31 782 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 TSACCQ96A04 125 aaPredicted RBP12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 WDR92Q96MX6 357 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 SRPK1Q96SB4 655 aaKnown RBP12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 AGAP2Q99490 1192 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 CDC6Q99741 560 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 RIOK2Q9BVS4 552 aaKnown RBP12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 TCEAL2Q9H3H9 227 aaPredicted RBP12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 WDR26Q9H7D7 661 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 ZNF148Q9UQR1 794 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 ZKSCAN5Q9Y2L8 839 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 ZNF711Q9Y462 761 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 SPEGQ15772 3267 aa12.88□□□□□ -0.35
MTHFD1-208ENST00000554739 PDE2AO00408 941 aaPredicted RBP12.87□□□□□ -0.35
MTHFD1-208ENST00000554739 TRIM38O00635 465 aa12.87□□□□□ -0.35
MTHFD1-208ENST00000554739 TNFRSF10CO14798 259 aa12.87□□□□□ -0.35
MTHFD1-208ENST00000554739 SCAMP1O15126 338 aa12.87□□□□□ -0.35
MTHFD1-208ENST00000554739 ATP1A1P05023 1023 aaKnown RBP12.87□□□□□ -0.35
MTHFD1-208ENST00000554739 HLA-DPA1P20036 260 aa12.87□□□□□ -0.35
MTHFD1-208ENST00000554739 KCNA4P22459 653 aa12.87□□□□□ -0.35
MTHFD1-208ENST00000554739 TNNT3P45378 269 aaPredicted RBP12.87□□□□□ -0.35
MTHFD1-208ENST00000554739 HK3P52790 923 aa12.87□□□□□ -0.35
MTHFD1-208ENST00000554739 SRP54P61011 504 aaKnown RBP12.87□□□□□ -0.35
MTHFD1-208ENST00000554739 PPARDQ03181 441 aa12.87□□□□□ -0.35
MTHFD1-208ENST00000554739 SNX1Q13596 522 aa12.87□□□□□ -0.35
MTHFD1-208ENST00000554739 LONRF2Q1L5Z9 754 aa12.87□□□□□ -0.35
MTHFD1-208ENST00000554739 INAVAQ3KP66 663 aa12.87□□□□□ -0.35
MTHFD1-208ENST00000554739 FAXCQ5TGI0 409 aa12.87□□□□□ -0.35
MTHFD1-208ENST00000554739 DRICH1Q6PGQ1 229 aaPredicted RBP12.87□□□□□ -0.35
MTHFD1-208ENST00000554739 ARHGEF18Q6ZSZ5 1173 aa12.87□□□□□ -0.35
MTHFD1-208ENST00000554739 HEATR4Q86WZ0 1026 aa12.87□□□□□ -0.35
MTHFD1-208ENST00000554739 PHACTR4Q8IZ21 702 aa12.87□□□□□ -0.35
MTHFD1-208ENST00000554739 RBFAQ8N0V3 343 aa12.87□□□□□ -0.35
MTHFD1-208ENST00000554739 ZNF548Q8NEK5 533 aaPredicted RBP12.87□□□□□ -0.35
MTHFD1-208ENST00000554739 ATL2Q8NHH9 583 aa12.87□□□□□ -0.35
MTHFD1-208ENST00000554739 BTN2A2Q8WVV5 523 aa12.87□□□□□ -0.35
MTHFD1-208ENST00000554739 MAIP1Q8WWC4 291 aa12.87□□□□□ -0.35
MTHFD1-208ENST00000554739 PBKQ96KB5 322 aa12.87□□□□□ -0.35
MTHFD1-208ENST00000554739 PPP1R2P1Q96PQ5 205 aa12.87□□□□□ -0.35
MTHFD1-208ENST00000554739 FICDQ9BVA6 458 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms