RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 THAP5Q7Z6K1 395 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 ARHGEF19Q8IW93 802 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 FAM167AQ96KS9 214 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 CCDC106Q9BWC9 280 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 KBTBD4Q9NVX7 518 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 ETAA1Q9NY74 926 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 AMACRQ9UHK6 382 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 ARHGEF10O15013 1369 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 MYO5CQ9NQX4 1742 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 LRRIQ3A6PVS8 624 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 RAD1O60671 282 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 RPA1P27694 616 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 CCR1P32246 355 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 BCAT1P54687 386 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 NUP107P57740 925 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 ERVK-24P63145 666 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 IL18R1Q13478 541 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 SH3D19Q5HYK7 790 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 TREML2Q5T2D2 321 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 ZC3H14Q6PJT7 736 aaKnown RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 TRAPPC6BQ86SZ2 158 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 ZNF655Q8N720 491 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 SPATA9Q9BWV2 254 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 STAP2Q9UGK3 403 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 PCDHA10Q9Y5I2 948 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 SNCAIPQ9Y6H5 919 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 PTPRKQ15262 1439 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 WASHC1A8K0Z3 465 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 TK2O00142 265 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 MDH1P40925 334 aaKnown RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 TXNL4AP83876 142 aaKnown RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 PURAQ00577 322 aaKnown RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 ARFRP1Q13795 201 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 GRM4Q14833 912 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 ATP6AP1LQ52LC2 224 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 TSHZ1Q6ZSZ6 1077 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 SPNS2Q8IVW8 549 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 HSPBAP1Q96EW2 488 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 TMEM121Q9BTD3 319 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 EVLQ9UI08 416 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 VPS51Q9UID3 782 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 POLR3HQ9Y535 204 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 NPC1L1Q9UHC9 1359 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 GSG1L2A8MUP6 293 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 UPK3BL1B0FP48 263 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 UPK3BL2E5RIL1 263 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 MGRN1O60291 552 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 RSL1D1O76021 490 aaKnown RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 LDHAP00338 332 aaKnown RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 RBP3P10745 1247 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 HSPA9P38646 679 aaKnown RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 FKBP3Q00688 224 aaKnown RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 SLC13A2Q13183 592 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 TRIM72Q6ZMU5 477 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 ATG14Q6ZNE5 492 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 SLC17A6Q9P2U8 582 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 CDH7Q9ULB5 785 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 TAF4O00268 1085 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 NRP2O60462 931 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 RECQL5O94762 991 aaPredicted RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 VNN2O95498 520 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 RFC5P40937 340 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 NPTX2P47972 431 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 TBX4P57082 545 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 RPL38P63173 70 aaKnown RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 SGCAQ16586 387 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 BICRALQ6AI39 1079 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 SPESP1Q6UW49 350 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 BEND5Q7L4P6 421 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 SEPT1Q8WYJ6 367 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 ZNF700Q9H0M5 742 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 XKR8Q9H6D3 395 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 PLGRKTQ9HBL7 147 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 MID1IP1Q9NPA3 183 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 ZNF860A6NHJ4 632 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 SCO2O43819 266 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 MED24O75448 989 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 MAGEA12P43365 314 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 KLF1Q13351 362 aaPredicted RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 SNTA1Q13424 505 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 USF2Q15853 346 aaPredicted RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 ALKBH5Q6P6C2 394 aaKnown RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 GPR141Q7Z602 305 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 IL22RA1Q8N6P7 574 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 C17orf50Q8WW18 174 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 MYRFLQ96LU7 910 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 ZFYVE21Q9BQ24 234 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 MACROD1Q9BQ69 325 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 EBPLQ9BY08 206 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 TMEM206Q9H813 350 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 KRT36O76013 467 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 KDM4BO94953 1096 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 TPOP07202 933 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 KRR1Q13601 381 aaKnown RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 PRKD1Q15139 912 aaPredicted RBP3.3□□□□□ -1.88
SYNE2-212ENST00000554584 SEC23AQ15436 765 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 SPANXN2Q5MJ10 180 aa3.3□□□□□ -1.88
SYNE2-212ENST00000554584 DENND5AQ6IQ26 1287 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms