RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 A0A1B0GVG6 124 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 TIPRLO75663 272 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 CHRM3P20309 590 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 GRIA3P42263 894 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 SCIMPQ6UWF3 145 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 LGI2Q8N0V4 545 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 MYO1HQ8N1T3 1032 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 OR7D4Q8NG98 312 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 RMDN1Q96DB5 314 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 CATSPERZQ9NTU4 200 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 EGFL7Q9UHF1 273 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 A0A0J9YYE9 177 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 NT5C1B-RDH14C9J2C7 533 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 TPST1O60507 370 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 ADAMTS4O75173 837 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 CRCPO75575 148 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 RHOBTB1O94844 696 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 CDK14O94921 469 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 PAPSS2O95340 614 aaPredicted RBP15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 PABPC4LP0CB38 370 aaKnown RBP15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 SERINC3Q13530 473 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 NFE2Q16621 373 aaPredicted RBP15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 LARP4Q71RC2 724 aaKnown RBP eCLIP15.67■□□□□ 0.15e-6■■□□□ 12.4
ARHGEF40-203ENST00000554514 RETREG3Q86VR2 466 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 FUNDC1Q8IVP5 155 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 TWIST2Q8WVJ9 160 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 TUBGCP3Q96CW5 907 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 CRISPLD1Q9H336 500 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 POLR3BQ9NW08 1133 aaPredicted RBP15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 SUCOQ9UBS9 1254 aaKnown RBP15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 AURKCQ9UQB9 309 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 TIMM22Q9Y584 194 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 SEPT4O43236 478 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 SPATA31D3P0C874 917 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 TIAL1Q01085 375 aaKnown RBP eCLIP15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 NRG1Q02297 640 aaPredicted RBP15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 SLC5A9Q2M3M2 681 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 MRNIPQ6NTE8 343 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 SPATA31D4Q6ZUB0 917 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 RAB44Q7Z6P3 723 aaPredicted RBP15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 TICAM1Q8IUC6 712 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 METTL25Q8N6Q8 603 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 DCBLD1Q8N8Z6 715 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 OR4L1Q8NH43 312 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 ESAMQ96AP7 390 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 DOCK4Q8N1I0 1966 aa15.67■□□□□ 0.1
ARHGEF40-203ENST00000554514 C7orf72A4D263 438 aa15.66■□□□□ 0.1
ARHGEF40-203ENST00000554514 TRIM24O15164 1050 aa15.66■□□□□ 0.1
ARHGEF40-203ENST00000554514 AKAP10O43572 662 aa15.66■□□□□ 0.1
ARHGEF40-203ENST00000554514 SNUPNO95149 360 aaKnown RBP15.66■□□□□ 0.1
ARHGEF40-203ENST00000554514 FDXRP22570 491 aa15.66■□□□□ 0.1
ARHGEF40-203ENST00000554514 GATMP50440 423 aa15.66■□□□□ 0.1
ARHGEF40-203ENST00000554514 SCNN1BP51168 640 aa15.66■□□□□ 0.1
ARHGEF40-203ENST00000554514 YBX1P67809 324 aaKnown RBP15.66■□□□□ 0.1
ARHGEF40-203ENST00000554514 PRKCZQ05513 592 aa15.66■□□□□ 0.1
ARHGEF40-203ENST00000554514 IL10RBQ08334 325 aa15.66■□□□□ 0.1
ARHGEF40-203ENST00000554514 RPS6KA2Q15349 733 aa15.66■□□□□ 0.1
ARHGEF40-203ENST00000554514 NADK2Q4G0N4 442 aa15.66■□□□□ 0.1
ARHGEF40-203ENST00000554514 NADSYN1Q6IA69 706 aa15.66■□□□□ 0.1
ARHGEF40-203ENST00000554514 CLYBLQ8N0X4 340 aa15.66■□□□□ 0.1
ARHGEF40-203ENST00000554514 SLCO4A1Q96BD0 722 aa15.66■□□□□ 0.1
ARHGEF40-203ENST00000554514 LOC285095A0A1B0GVY8 99 aa15.66■□□□□ 0.1
ARHGEF40-203ENST00000554514 OAZ2O95190 189 aa15.66■□□□□ 0.1
ARHGEF40-203ENST00000554514 IGHA2P01877 340 aa15.66■□□□□ 0.1
ARHGEF40-203ENST00000554514 FAM58BPP0C7Q3 252 aa15.66■□□□□ 0.1
ARHGEF40-203ENST00000554514 ZNF37AP17032 561 aaPredicted RBP15.66■□□□□ 0.1
ARHGEF40-203ENST00000554514 CKMT2P17540 419 aa15.66■□□□□ 0.1
ARHGEF40-203ENST00000554514 EEF1DP29692 281 aaKnown RBP15.66■□□□□ 0.1
ARHGEF40-203ENST00000554514 CASP2P42575 452 aa15.66■□□□□ 0.1
ARHGEF40-203ENST00000554514 CDKN1CP49918 316 aaPredicted RBP15.66■□□□□ 0.1
ARHGEF40-203ENST00000554514 PTPRRQ15256 657 aa15.66■□□□□ 0.1
ARHGEF40-203ENST00000554514 TRIP4Q15650 581 aaPredicted RBP15.66■□□□□ 0.1
ARHGEF40-203ENST00000554514 SLC14A2Q15849 920 aa15.66■□□□□ 0.1
ARHGEF40-203ENST00000554514 AP1ARQ63HQ0 302 aa15.66■□□□□ 0.1
ARHGEF40-203ENST00000554514 COLGALT2Q8IYK4 626 aa15.66■□□□□ 0.1
ARHGEF40-203ENST00000554514 ZIC5Q96T25 663 aa15.66■□□□□ 0.1
ARHGEF40-203ENST00000554514 SLC29A1Q99808 456 aa15.66■□□□□ 0.1
ARHGEF40-203ENST00000554514 COL4A4P53420 1690 aaPredicted RBP15.65■□□□□ 0.1
ARHGEF40-203ENST00000554514 SCAMP3O14828 347 aaKnown RBP15.65■□□□□ 0.1
ARHGEF40-203ENST00000554514 AZIN1O14977 448 aa15.65■□□□□ 0.1
ARHGEF40-203ENST00000554514 RPP40O75818 363 aaKnown RBP15.65■□□□□ 0.1
ARHGEF40-203ENST00000554514 STAMBPO95630 424 aa15.65■□□□□ 0.1
ARHGEF40-203ENST00000554514 TFAP2AP05549 437 aa15.65■□□□□ 0.1
ARHGEF40-203ENST00000554514 UGT1A6P19224 532 aa15.65■□□□□ 0.1
ARHGEF40-203ENST00000554514 INHBCP55103 352 aa15.65■□□□□ 0.1
ARHGEF40-203ENST00000554514 RHDQ02161 417 aa15.65■□□□□ 0.1
ARHGEF40-203ENST00000554514 RBBP5Q15291 538 aaKnown RBP15.65■□□□□ 0.1
ARHGEF40-203ENST00000554514 C6orf10Q5SRN2 563 aa15.65■□□□□ 0.1
ARHGEF40-203ENST00000554514 PAQR3Q6TCH7 311 aa15.65■□□□□ 0.1
ARHGEF40-203ENST00000554514 IFNEQ86WN2 208 aa15.65■□□□□ 0.1
ARHGEF40-203ENST00000554514 DHFR2Q86XF0 187 aa15.65■□□□□ 0.1
ARHGEF40-203ENST00000554514 TEX26Q8N6G2 289 aa15.65■□□□□ 0.1
ARHGEF40-203ENST00000554514 L3HYPDHQ96EM0 354 aa15.65■□□□□ 0.1
ARHGEF40-203ENST00000554514 C8orf48Q96LL4 319 aa15.65■□□□□ 0.1
ARHGEF40-203ENST00000554514 GPR62Q9BZJ7 368 aa15.65■□□□□ 0.1
ARHGEF40-203ENST00000554514 NACA2Q9H009 215 aa15.65■□□□□ 0.1
ARHGEF40-203ENST00000554514 TLR8Q9NR97 1041 aaKnown RBP15.65■□□□□ 0.1
ARHGEF40-203ENST00000554514 IKZF3Q9UKT9 509 aa15.65■□□□□ 0.1
ARHGEF40-203ENST00000554514 CNOT6Q9ULM6 557 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms