RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 TEKQ02763 1124 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 PRKCDQ05655 676 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 FAPQ12884 760 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 SLAMF1Q13291 335 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 TNK1Q13470 666 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 INPP5AQ14642 412 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 ACOX1Q15067 660 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 TAZQ16635 292 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 IMPG1Q17R60 797 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 GPAT3Q53EU6 434 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 C6orf141Q5SZD1 244 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 GARNL3Q5VVW2 1013 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 TBPL2Q6SJ96 375 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 C1orf186Q6ZWK4 172 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 PRSS42Q7Z5A4 293 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 P2RY8Q86VZ1 359 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 DNAJC10Q8IXB1 793 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 SYTL1Q8IYJ3 562 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 FNDC5Q8NAU1 212 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 SLC7A14Q8TBB6 771 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 KCTD4Q8WVF5 259 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 INTS12Q96CB8 462 aaKnown RBP9.55□□□□□ -0.88
SIX4-202ENST00000554079 MCRS1Q96EZ8 462 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 FTHL17Q9BXU8 183 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 MMP27Q9H306 513 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 XPNPEP3Q9NQH7 507 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 IARS2Q9NSE4 1012 aaKnown RBP9.55□□□□□ -0.88
SIX4-202ENST00000554079 FAM105AQ9NUU6 356 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 INTS10Q9NVR2 710 aaKnown RBP9.55□□□□□ -0.88
SIX4-202ENST00000554079 ZNF358Q9NW07 568 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 TEKT2Q9UIF3 430 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 TRMT6Q9UJA5 497 aaKnown RBP9.55□□□□□ -0.88
SIX4-202ENST00000554079 PDE10AQ9Y233 779 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 RAP2CQ9Y3L5 183 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 PCDHGB1Q9Y5G3 927 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 TMEM191CA6NGB0 347 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 ZNF98A6NK75 572 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 TISP43B9A030 160 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 H3BQ06 376 aaPredicted RBP9.55□□□□□ -0.88
SIX4-202ENST00000554079 PLD2O14939 933 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 YKT6O15498 198 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 CST8O60676 142 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 SERPINI2O75830 405 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 SRP72O76094 671 aaKnown RBP9.55□□□□□ -0.88
SIX4-202ENST00000554079 SNX4O95219 450 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 TP53P04637 393 aaPredicted RBP9.55□□□□□ -0.88
SIX4-202ENST00000554079 IFNA16P05015 189 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 CFHP08603 1231 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 FCGR1AP12314 374 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 ALOX12P18054 663 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 TGFBR1P36897 503 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 RPL7AP62424 266 aaKnown RBP9.55□□□□□ -0.88
SIX4-202ENST00000554079 OGDHQ02218 1023 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 BAMBIQ13145 260 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 SEMA3BQ13214 749 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 GALEQ14376 348 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 STARD3Q14849 445 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 CA9Q16790 459 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 CTU2Q2VPK5 515 aaKnown RBP9.55□□□□□ -0.88
SIX4-202ENST00000554079 PLEKHG6Q3KR16 790 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 ZNF404Q494X3 552 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 BCL7AQ4VC05 210 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 VARS2Q5ST30 1063 aaKnown RBP9.55□□□□□ -0.88
SIX4-202ENST00000554079 LCN8Q6JVE9 175 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 XKRXQ6PP77 449 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 HACD2Q6Y1H2 254 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 ANKS3Q6ZW76 656 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 CREB3L2Q70SY1 520 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 PHF13Q86YI8 300 aaPredicted RBP9.55□□□□□ -0.88
SIX4-202ENST00000554079 PELI3Q8N2H9 469 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 AADATQ8N5Z0 425 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 PAF1Q8N7H5 531 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 TRPV3Q8NET8 790 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 OR52H1Q8NGJ2 320 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 FANK1Q8TC84 345 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 SLC22A8Q8TCC7 542 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 TMEM174Q8WUU8 243 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 DEDD2Q8WXF8 326 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 NSUN4Q96CB9 384 aaKnown RBP9.55□□□□□ -0.88
SIX4-202ENST00000554079 FAF2Q96CS3 445 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 LRRC39Q96DD0 335 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 ELMO2Q96JJ3 720 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 GJD4Q96KN9 370 aaPredicted RBP9.55□□□□□ -0.88
SIX4-202ENST00000554079 NEDD4LQ96PU5 975 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 SDHCQ99643 169 aaPredicted RBP9.55□□□□□ -0.88
SIX4-202ENST00000554079 GATA5Q9BWX5 397 aaPredicted RBP9.55□□□□□ -0.88
SIX4-202ENST00000554079 ASPSCR1Q9BZE9 553 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 REXO4Q9GZR2 422 aaKnown RBP9.55□□□□□ -0.88
SIX4-202ENST00000554079 NXF2Q9GZY0 626 aaKnown RBP9.55□□□□□ -0.88
SIX4-202ENST00000554079 ILKAPQ9H0C8 392 aaPredicted RBP9.55□□□□□ -0.88
SIX4-202ENST00000554079 FAM49AQ9H0Q0 323 aaPredicted RBP9.55□□□□□ -0.88
SIX4-202ENST00000554079 PCDH10Q9P2E7 1040 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 SLC17A6Q9P2U8 582 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 TBC1D24Q9ULP9 559 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 COQ4Q9Y3A0 265 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 SNX5Q9Y5X3 404 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 CSNK1G3Q9Y6M4 447 aa9.55□□□□□ -0.88
SIX4-202ENST00000554079 TNS2Q63HR2 1409 aa9.54□□□□□ -0.88
SIX4-202ENST00000554079 COL18A1P39060 1754 aa9.54□□□□□ -0.88
SIX4-202ENST00000554079 COL14A1Q05707 1796 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms