RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 LOXL2Q9Y4K0 774 aa7.78□□□□□ -1.16
ABCD4-220ENST00000553998 PCDHB11Q9Y5F2 797 aa7.78□□□□□ -1.16
ABCD4-220ENST00000553998 PCDHA3Q9Y5H8 950 aa7.78□□□□□ -1.16
ABCD4-220ENST00000553998 CAPN6Q9Y6Q1 641 aa7.78□□□□□ -1.16
ABCD4-220ENST00000553998 LRRD1A4D1F6 860 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 C16orf96A6NNT2 1141 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 RAMP2O60895 175 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 ZRANB2O95218 330 aaKnown RBP eCLIP7.77□□□□□ -1.17
ABCD4-220ENST00000553998 KRT1P04264 644 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 RPLP0P05388 317 aaKnown RBP7.77□□□□□ -1.17
ABCD4-220ENST00000553998 RHOCP08134 193 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 CELA2BP08218 269 aaPredicted RBP7.77□□□□□ -1.17
ABCD4-220ENST00000553998 ALPIP09923 528 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 ERCC2P18074 760 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 ITIH1P19827 911 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 IL4RP24394 825 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 MSNP26038 577 aaKnown RBP7.77□□□□□ -1.17
ABCD4-220ENST00000553998 SERPINB6P35237 376 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 IGFALSP35858 605 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 GJC1P36383 396 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 ETV5P41161 510 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 CETN2P41208 172 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 ABL2P42684 1182 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 CD97P48960 835 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 SERPINH1P50454 418 aaKnown RBP7.77□□□□□ -1.17
ABCD4-220ENST00000553998 CCNHP51946 323 aaPredicted RBP7.77□□□□□ -1.17
ABCD4-220ENST00000553998 NDST2P52849 883 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 THOP1P52888 689 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 RWDD2BP57060 319 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 PPARDQ03181 441 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 KCNAB2Q13303 367 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 DPYSQ14117 519 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 DPYSL3Q14195 570 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 IGFBP7Q16270 282 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 SKIDA1Q1XH10 827 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 PARP15Q460N3 678 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 ATP13A4Q4VNC1 1196 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 ODF2Q5BJF6 829 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 ZFYVE27Q5T4F4 411 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 FAXCQ5TGI0 409 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 LINGO4Q6UY18 593 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 TFAP2DQ7Z6R9 452 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 NT5DC3Q86UY8 548 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 VASH2Q86V25 355 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 CPNE8Q86YQ8 564 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 LRRC49Q8IUZ0 686 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 REXO1L1PQ8IX06 675 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 RCOR2Q8IZ40 523 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 UBL4BQ8N7F7 174 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 KYQ8NBH2 561 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 TP53I13Q8NBR0 393 aaPredicted RBP7.77□□□□□ -1.17
ABCD4-220ENST00000553998 EXD1Q8NHP7 514 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 RAPGEF5Q92565 580 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 USP7Q93009 1102 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 NKD1Q969G9 470 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 CMKLR1Q99788 373 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 MAGEB5Q9BZ81 275 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 CPEB1Q9BZB8 566 aaKnown RBP7.77□□□□□ -1.17
ABCD4-220ENST00000553998 CDH19Q9H159 772 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 MAGEH1Q9H213 219 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 TNKS2Q9H2K2 1166 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 GOLPH3Q9H4A6 298 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 MBNL1Q9NR56 388 aaKnown RBP7.77□□□□□ -1.17
ABCD4-220ENST00000553998 GULP1Q9UBP9 304 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 HYOU1Q9Y4L1 999 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 PCDHGA3Q9Y5H0 932 aa7.77□□□□□ -1.17
ABCD4-220ENST00000553998 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.77□□□□□ -1.17
ABCD4-220ENST00000553998 SPTAN1Q13813 2472 aaKnown RBP7.77□□□□□ -1.17
ABCD4-220ENST00000553998 UTP20O75691 2785 aaKnown RBP7.76□□□□□ -1.17
ABCD4-220ENST00000553998 C3orf70A6NLC5 250 aaPredicted RBP7.76□□□□□ -1.17
ABCD4-220ENST00000553998 KIF5CO60282 957 aa7.76□□□□□ -1.17
ABCD4-220ENST00000553998 FTCDO95954 541 aa7.76□□□□□ -1.17
ABCD4-220ENST00000553998 GLB1P16278 677 aa7.76□□□□□ -1.17
ABCD4-220ENST00000553998 ZFXP17010 805 aaPredicted RBP7.76□□□□□ -1.17
ABCD4-220ENST00000553998 PTPN7P35236 360 aa7.76□□□□□ -1.17
ABCD4-220ENST00000553998 ARSDP51689 593 aa7.76□□□□□ -1.17
ABCD4-220ENST00000553998 POLE2P56282 527 aa7.76□□□□□ -1.17
ABCD4-220ENST00000553998 COPS2P61201 443 aa7.76□□□□□ -1.17
ABCD4-220ENST00000553998 ARF5P84085 180 aa7.76□□□□□ -1.17
ABCD4-220ENST00000553998 GNA12Q03113 381 aa7.76□□□□□ -1.17
ABCD4-220ENST00000553998 TFDP2Q14188 446 aa7.76□□□□□ -1.17
ABCD4-220ENST00000553998 AGERQ15109 404 aa7.76□□□□□ -1.17
ABCD4-220ENST00000553998 PPP2R5EQ16537 467 aa7.76□□□□□ -1.17
ABCD4-220ENST00000553998 TAZQ16635 292 aa7.76□□□□□ -1.17
ABCD4-220ENST00000553998 CLPPQ16740 277 aaPredicted RBP7.76□□□□□ -1.17
ABCD4-220ENST00000553998 ANKRD20A8PQ5CZ79 823 aa7.76□□□□□ -1.17
ABCD4-220ENST00000553998 ZNF805Q5CZA5 627 aa7.76□□□□□ -1.17
ABCD4-220ENST00000553998 CERCAMQ5T4B2 595 aa7.76□□□□□ -1.17
ABCD4-220ENST00000553998 AFMIDQ63HM1 303 aa7.76□□□□□ -1.17
ABCD4-220ENST00000553998 TMCO3Q6UWJ1 677 aa7.76□□□□□ -1.17
ABCD4-220ENST00000553998 TMPRSS9Q7Z410 1059 aa7.76□□□□□ -1.17
ABCD4-220ENST00000553998 GKN2Q86XP6 184 aa7.76□□□□□ -1.17
ABCD4-220ENST00000553998 PTRH1Q86Y79 214 aaKnown RBP7.76□□□□□ -1.17
ABCD4-220ENST00000553998 CCNJLQ8IV13 435 aa7.76□□□□□ -1.17
ABCD4-220ENST00000553998 PCDH19Q8TAB3 1148 aa7.76□□□□□ -1.17
ABCD4-220ENST00000553998 GPBAR1Q8TDU6 330 aa7.76□□□□□ -1.17
ABCD4-220ENST00000553998 KRT35Q92764 455 aa7.76□□□□□ -1.17
ABCD4-220ENST00000553998 HES6Q96HZ4 224 aa7.76□□□□□ -1.17
ABCD4-220ENST00000553998 CATSPER2Q96P56 530 aa7.76□□□□□ -1.17
ABCD4-220ENST00000553998 RNF157Q96PX1 679 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms