RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 METAP1P53582 386 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 SLC5A3P53794 718 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 MFAP3P55082 362 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 RPL10AP62906 217 aaKnown RBP3.3□□□□□ -1.88
SLIRP-202ENST00000553981 NOP14P78316 857 aaKnown RBP3.3□□□□□ -1.88
SLIRP-202ENST00000553981 HSD11B2P80365 405 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 GAD2Q05329 585 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 GFPT1Q06210 699 aaPredicted RBP3.3□□□□□ -1.88
SLIRP-202ENST00000553981 SMARCB1Q12824 385 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 SRSF6Q13247 344 aaKnown RBP3.3□□□□□ -1.88
SLIRP-202ENST00000553981 SP140Q13342 867 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 KCNB1Q14721 858 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 SMAD1Q15797 465 aaKnown RBP3.3□□□□□ -1.88
SLIRP-202ENST00000553981 NFE2Q16621 373 aaPredicted RBP3.3□□□□□ -1.88
SLIRP-202ENST00000553981 CYP2A13Q16696 494 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 UGT8Q16880 541 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 PLEKHG6Q3KR16 790 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 SPDYCQ5MJ68 293 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 EOGTQ5NDL2 527 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 LCE1AQ5T7P2 110 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 SNX30Q5VWJ9 437 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 AFMIDQ63HM1 303 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 SPOPLQ6IQ16 392 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 TRAPPC11Q7Z392 1133 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 METTL23Q86XA0 190 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 GATAD2AQ86YP4 633 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 LURAP1LQ8IV03 231 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 CD302Q8IX05 232 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 LRRC52Q8N7C0 313 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 C12orf29Q8N999 325 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 GPR156Q8NFN8 814 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 MYCBPAPQ8TBZ2 947 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 POMGNT1Q8WZA1 660 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 HPDLQ96IR7 371 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 PIWIL1Q96J94 861 aaKnown RBP3.3□□□□□ -1.88
SLIRP-202ENST00000553981 LMLNQ96KR4 655 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 C8orf48Q96LL4 319 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 GCNAQ96QF7 691 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 AIFM2Q9BRQ8 373 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 LLPHQ9BRT6 129 aaKnown RBP3.3□□□□□ -1.88
SLIRP-202ENST00000553981 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.3□□□□□ -1.88
SLIRP-202ENST00000553981 MRI1Q9BV20 369 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 GPR174Q9BXC1 333 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 PANK2Q9BZ23 570 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 SLC29A3Q9BZD2 475 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 ZHX3Q9H4I2 956 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 SLC32A1Q9H598 525 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 GAREM1Q9H706 876 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 UNKLQ9H9P5 680 aaKnown RBP3.3□□□□□ -1.88
SLIRP-202ENST00000553981 APOBEC3GQ9HC16 384 aaKnown RBP3.3□□□□□ -1.88
SLIRP-202ENST00000553981 ITM2CQ9NQX7 267 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 TM7SF3Q9NS93 570 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 RBAKQ9NYW8 714 aaPredicted RBP3.3□□□□□ -1.88
SLIRP-202ENST00000553981 LARSQ9P2J5 1176 aaKnown RBP3.3□□□□□ -1.88
SLIRP-202ENST00000553981 SLC17A6Q9P2U8 582 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 UXTQ9UBK9 157 aaPredicted RBP3.3□□□□□ -1.88
SLIRP-202ENST00000553981 USP25Q9UHP3 1055 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 KCNE5Q9UJ90 142 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 FBXO2Q9UK22 296 aaPredicted RBP3.3□□□□□ -1.88
SLIRP-202ENST00000553981 CDH9Q9ULB4 789 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 LIMCH1Q9UPQ0 1083 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 SIK3Q9Y2K2 1263 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 STON1Q9Y6Q2 735 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 CHD6Q8TD26 2715 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 ZFYVE26Q68DK2 2539 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 GOLGA4Q13439 2230 aaKnown RBP3.29□□□□□ -1.88
SLIRP-202ENST00000553981 ATRXP46100 2492 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 BPTFQ12830 3046 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 APC2O95996 2303 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 NBPF19A0A087WUL8 3843 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 A0A1W2PR77 199 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 E2F8A0AVK6 867 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 NEDD8-MDP1E9PL57 170 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 H0Y626 953 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 TULP2O00295 520 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 AP5Z1O43299 807 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 XPOTO43592 962 aaKnown RBP3.29□□□□□ -1.88
SLIRP-202ENST00000553981 TSPAN3O60637 253 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 HUS1O60921 280 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 TRIM16O95361 564 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 GCNT3O95395 438 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 PENKP01210 267 aaPredicted RBP3.29□□□□□ -1.88
SLIRP-202ENST00000553981 CALCAP01258 141 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 IGLV3-19P01714 112 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 IGHV4-34P06331 123 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 RAP2AP10114 183 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 SLC6A2P23975 617 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 YWHAQP27348 245 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 CD6P30203 668 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 GNL1P36915 607 aaPredicted RBP3.29□□□□□ -1.88
SLIRP-202ENST00000553981 LHX1P48742 406 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 NUMBP49757 651 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 PROK1P58294 105 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 MYL6P60660 151 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 RBP5P82980 135 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 CDK17Q00537 523 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 MYL7Q01449 175 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 TSPY1Q01534 308 aa3.29□□□□□ -1.88
SLIRP-202ENST00000553981 POU5F1Q01860 360 aaKnown RBP3.29□□□□□ -1.88
SLIRP-202ENST00000553981 SRSF1Q07955 248 aaKnown RBP eCLIP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms