RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 VPS37BQ9H9H4 285 aa14.54□□□□□ -0.08
SHMT2-208ENST00000553868 LHX3Q9UBR4 397 aa14.54□□□□□ -0.08
SHMT2-208ENST00000553868 ZC3H7BQ9UGR2 993 aaKnown RBP14.54□□□□□ -0.08
SHMT2-208ENST00000553868 CHMP2BQ9UQN3 213 aa14.54□□□□□ -0.08
SHMT2-208ENST00000553868 PLAAQ9Y263 795 aa14.54□□□□□ -0.08
SHMT2-208ENST00000553868 FCF1Q9Y324 198 aaKnown RBP14.54□□□□□ -0.08
SHMT2-208ENST00000553868 MAD1L1Q9Y6D9 718 aa14.54□□□□□ -0.08
SHMT2-208ENST00000553868 DOPEY2Q9Y3R5 2298 aa14.53□□□□□ -0.08
SHMT2-208ENST00000553868 GOLGA6L10A6NI86 522 aa14.53□□□□□ -0.08
SHMT2-208ENST00000553868 OPA1O60313 960 aa14.53□□□□□ -0.08
SHMT2-208ENST00000553868 USP12O75317 370 aa14.53□□□□□ -0.08
SHMT2-208ENST00000553868 AVILO75366 819 aa14.53□□□□□ -0.08
SHMT2-208ENST00000553868 GSRP00390 522 aa14.53□□□□□ -0.08
SHMT2-208ENST00000553868 MMP2P08253 660 aa14.53□□□□□ -0.08
SHMT2-208ENST00000553868 HLA-EP13747 358 aa14.53□□□□□ -0.08
SHMT2-208ENST00000553868 ADRA1AP35348 466 aa14.53□□□□□ -0.08
SHMT2-208ENST00000553868 RECQLP46063 649 aaPredicted RBP14.53□□□□□ -0.08
SHMT2-208ENST00000553868 SLC6A11P48066 632 aa14.53□□□□□ -0.08
SHMT2-208ENST00000553868 ST8SIA6P61647 398 aa14.53□□□□□ -0.08
SHMT2-208ENST00000553868 RAD51Q06609 339 aa14.53□□□□□ -0.08
SHMT2-208ENST00000553868 CDK18Q07002 472 aa14.53□□□□□ -0.08
SHMT2-208ENST00000553868 SLC29A2Q14542 456 aa14.53□□□□□ -0.08
SHMT2-208ENST00000553868 GRM3Q14832 879 aa14.53□□□□□ -0.08
SHMT2-208ENST00000553868 PCSK7Q16549 785 aa14.53□□□□□ -0.08
SHMT2-208ENST00000553868 RANBP10Q6VN20 620 aa14.53□□□□□ -0.08
SHMT2-208ENST00000553868 SRLQ86TD4 932 aa14.53□□□□□ -0.08
SHMT2-208ENST00000553868 ADIPOR2Q86V24 386 aa14.53□□□□□ -0.08
SHMT2-208ENST00000553868 SH2D3CQ8N5H7 860 aa14.53□□□□□ -0.08
SHMT2-208ENST00000553868 PTCD2Q8WV60 388 aaKnown RBP14.53□□□□□ -0.08
SHMT2-208ENST00000553868 UCMAQ8WVF2 138 aa14.53□□□□□ -0.08
SHMT2-208ENST00000553868 SIGLEC10Q96LC7 697 aa14.53□□□□□ -0.08
SHMT2-208ENST00000553868 CIPCQ9C0C6 399 aa14.53□□□□□ -0.08
SHMT2-208ENST00000553868 PPCSQ9HAB8 311 aa14.53□□□□□ -0.08
SHMT2-208ENST00000553868 ARNT2Q9HBZ2 717 aa14.53□□□□□ -0.08
SHMT2-208ENST00000553868 NOD2Q9HC29 1040 aa14.53□□□□□ -0.08
SHMT2-208ENST00000553868 CD93Q9NPY3 652 aa14.53□□□□□ -0.08
SHMT2-208ENST00000553868 ERVW-1Q9UQF0 538 aa14.53□□□□□ -0.08
SHMT2-208ENST00000553868 BTBD3Q9Y2F9 522 aa14.53□□□□□ -0.08
SHMT2-208ENST00000553868 ACTL7AQ9Y615 435 aa14.53□□□□□ -0.08
SHMT2-208ENST00000553868 IGHV1OR15-9A0A0B4J2B8 117 aa14.52□□□□□ -0.09
SHMT2-208ENST00000553868 B8ZZF3 427 aa14.52□□□□□ -0.09
SHMT2-208ENST00000553868 SASH3O75995 380 aa14.52□□□□□ -0.09
SHMT2-208ENST00000553868 NDST3O95803 873 aa14.52□□□□□ -0.09
SHMT2-208ENST00000553868 MT-CO1P00395 513 aa14.52□□□□□ -0.09
SHMT2-208ENST00000553868 AGTP01019 485 aa14.52□□□□□ -0.09
SHMT2-208ENST00000553868 FGF1P05230 155 aa14.52□□□□□ -0.09
SHMT2-208ENST00000553868 DLDP09622 509 aaKnown RBP14.52□□□□□ -0.09
SHMT2-208ENST00000553868 SRCP12931 536 aa14.52□□□□□ -0.09
SHMT2-208ENST00000553868 PGAM1P18669 254 aa14.52□□□□□ -0.09
SHMT2-208ENST00000553868 MGAT1P26572 445 aa14.52□□□□□ -0.09
SHMT2-208ENST00000553868 STX2P32856 288 aa14.52□□□□□ -0.09
SHMT2-208ENST00000553868 GRIA1P42261 906 aa14.52□□□□□ -0.09
SHMT2-208ENST00000553868 CXADRP78310 365 aa14.52□□□□□ -0.09
SHMT2-208ENST00000553868 LY6DQ14210 128 aa14.52□□□□□ -0.09
SHMT2-208ENST00000553868 STAT4Q14765 748 aa14.52□□□□□ -0.09
SHMT2-208ENST00000553868 FASTKD3Q14CZ7 662 aaKnown RBP14.52□□□□□ -0.09
SHMT2-208ENST00000553868 SMAD1Q15797 465 aaKnown RBP14.52□□□□□ -0.09
SHMT2-208ENST00000553868 GEN1Q17RS7 908 aa14.52□□□□□ -0.09
SHMT2-208ENST00000553868 ACCSLQ4AC99 568 aa14.52□□□□□ -0.09
SHMT2-208ENST00000553868 HSP90B2PQ58FF3 399 aa14.52□□□□□ -0.09
SHMT2-208ENST00000553868 HP1BP3Q5SSJ5 553 aaPredicted RBP14.52□□□□□ -0.09
SHMT2-208ENST00000553868 C22orf39Q6P5X5 142 aa14.52□□□□□ -0.09
SHMT2-208ENST00000553868 NCEH1Q6PIU2 408 aa14.52□□□□□ -0.09
SHMT2-208ENST00000553868 DHRS13Q6UX07 377 aa14.52□□□□□ -0.09
SHMT2-208ENST00000553868 SLC36A4Q6YBV0 504 aa14.52□□□□□ -0.09
SHMT2-208ENST00000553868 PLPP6Q8IY26 295 aa14.52□□□□□ -0.09
SHMT2-208ENST00000553868 KDM1BQ8NB78 822 aa14.52□□□□□ -0.09
SHMT2-208ENST00000553868 PPHLN1Q8NEY8 458 aaKnown RBP14.52□□□□□ -0.09
SHMT2-208ENST00000553868 OR2AP1Q8NGE2 309 aa14.52□□□□□ -0.09
SHMT2-208ENST00000553868 RHBDD1Q8TEB9 315 aa14.52□□□□□ -0.09
SHMT2-208ENST00000553868 EXOC2Q96KP1 924 aa14.52□□□□□ -0.09
SHMT2-208ENST00000553868 ZIM3Q96PE6 472 aa14.52□□□□□ -0.09
SHMT2-208ENST00000553868 TUBGCP5Q96RT8 1024 aa14.52□□□□□ -0.09
SHMT2-208ENST00000553868 APOL2Q9BQE5 337 aa14.52□□□□□ -0.09
SHMT2-208ENST00000553868 ADGRE3Q9BY15 652 aa14.52□□□□□ -0.09
SHMT2-208ENST00000553868 LRRC4CQ9HCJ2 640 aa14.52□□□□□ -0.09
SHMT2-208ENST00000553868 CYP8B1Q9UNU6 501 aa14.52□□□□□ -0.09
SHMT2-208ENST00000553868 PLA2G4CQ9UP65 541 aa14.52□□□□□ -0.09
SHMT2-208ENST00000553868 FNDC3AQ9Y2H6 1198 aaKnown RBP14.52□□□□□ -0.09
SHMT2-208ENST00000553868 MYOFQ9NZM1 2061 aa14.51□□□□□ -0.09
SHMT2-208ENST00000553868 LOC285095A0A1B0GVY8 99 aa14.51□□□□□ -0.09
SHMT2-208ENST00000553868 CAPN8A6NHC0 703 aa14.51□□□□□ -0.09
SHMT2-208ENST00000553868 K7ERQ8 282 aa14.51□□□□□ -0.09
SHMT2-208ENST00000553868 ATP9BO43861 1147 aa14.51□□□□□ -0.09
SHMT2-208ENST00000553868 SLC28A2O43868 658 aa14.51□□□□□ -0.09
SHMT2-208ENST00000553868 SOCS5O75159 536 aa14.51□□□□□ -0.09
SHMT2-208ENST00000553868 BANF1O75531 89 aa14.51□□□□□ -0.09
SHMT2-208ENST00000553868 POLBP06746 335 aa14.51□□□□□ -0.09
SHMT2-208ENST00000553868 GABRG2P18507 467 aa14.51□□□□□ -0.09
SHMT2-208ENST00000553868 CTSOP43234 321 aaPredicted RBP14.51□□□□□ -0.09
SHMT2-208ENST00000553868 RGRP47804 291 aa14.51□□□□□ -0.09
SHMT2-208ENST00000553868 MTM1Q13496 603 aa14.51□□□□□ -0.09
SHMT2-208ENST00000553868 SLC1A5Q15758 541 aa14.51□□□□□ -0.09
SHMT2-208ENST00000553868 KLHL38Q2WGJ6 581 aa14.51□□□□□ -0.09
SHMT2-208ENST00000553868 PCID2Q5JVF3 399 aa14.51□□□□□ -0.09
SHMT2-208ENST00000553868 EOGTQ5NDL2 527 aa14.51□□□□□ -0.09
SHMT2-208ENST00000553868 C3orf62Q6ZUJ4 267 aa14.51□□□□□ -0.09
SHMT2-208ENST00000553868 C12orf40Q86WS4 652 aa14.51□□□□□ -0.09
SHMT2-208ENST00000553868 CNPY4Q8N129 248 aa14.51□□□□□ -0.09
SHMT2-208ENST00000553868 RYBPQ8N488 228 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms