RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 HEATR4Q86WZ0 1026 aa9.93□□□□□ -0.82
ACTN1-208ENST00000553370 ZSWIM9Q86XI8 627 aa9.93□□□□□ -0.82
ACTN1-208ENST00000553370 MCOLN2Q8IZK6 566 aa9.93□□□□□ -0.82
ACTN1-208ENST00000553370 ATPAF2Q8N5M1 289 aa9.93□□□□□ -0.82
ACTN1-208ENST00000553370 ZDHHC1Q8WTX9 485 aa9.93□□□□□ -0.82
ACTN1-208ENST00000553370 SNRNP27Q8WVK2 155 aaKnown RBP9.93□□□□□ -0.82
ACTN1-208ENST00000553370 EXTL1Q92935 676 aa9.93□□□□□ -0.82
ACTN1-208ENST00000553370 ZNF653Q96CK0 615 aa9.93□□□□□ -0.82
ACTN1-208ENST00000553370 KCTD12Q96CX2 325 aaKnown RBP9.93□□□□□ -0.82
ACTN1-208ENST00000553370 KCTD15Q96SI1 283 aaPredicted RBP9.93□□□□□ -0.82
ACTN1-208ENST00000553370 SNRNP25Q9BV90 132 aaKnown RBP9.93□□□□□ -0.82
ACTN1-208ENST00000553370 SLC39A8Q9C0K1 460 aa9.93□□□□□ -0.82
ACTN1-208ENST00000553370 TMEM168Q9H0V1 697 aa9.93□□□□□ -0.82
ACTN1-208ENST00000553370 LRRC19Q9H756 370 aa9.93□□□□□ -0.82
ACTN1-208ENST00000553370 PDFQ9HBH1 243 aa9.93□□□□□ -0.82
ACTN1-208ENST00000553370 B4GALT6Q9UBX8 382 aa9.93□□□□□ -0.82
ACTN1-208ENST00000553370 SCINQ9Y6U3 715 aa9.93□□□□□ -0.82
ACTN1-208ENST00000553370 RNF215Q9Y6U7 377 aa9.93□□□□□ -0.82
ACTN1-208ENST00000553370 LRRK2Q5S007 2527 aa9.93□□□□□ -0.82
ACTN1-208ENST00000553370 FLNCQ14315 2725 aa9.92□□□□□ -0.82
ACTN1-208ENST00000553370 A0A1W2PQ67 120 aa9.92□□□□□ -0.82
ACTN1-208ENST00000553370 CFAP69A5D8W1 941 aa9.92□□□□□ -0.82
ACTN1-208ENST00000553370 TNFRSF10CO14798 259 aa9.92□□□□□ -0.82
ACTN1-208ENST00000553370 NVLO15381 856 aaKnown RBP9.92□□□□□ -0.82
ACTN1-208ENST00000553370 NUDT21O43809 227 aaKnown RBP9.92□□□□□ -0.82
ACTN1-208ENST00000553370 CPNE6O95741 557 aa9.92□□□□□ -0.82
ACTN1-208ENST00000553370 SFTPCP11686 197 aa9.92□□□□□ -0.82
ACTN1-208ENST00000553370 PNLIPP16233 465 aa9.92□□□□□ -0.82
ACTN1-208ENST00000553370 ERCC2P18074 760 aa9.92□□□□□ -0.82
ACTN1-208ENST00000553370 VIPR1P32241 457 aa9.92□□□□□ -0.82
ACTN1-208ENST00000553370 HSPA9P38646 679 aaKnown RBP9.92□□□□□ -0.82
ACTN1-208ENST00000553370 RGRP47804 291 aa9.92□□□□□ -0.82
ACTN1-208ENST00000553370 CSNK1DP48730 415 aa9.92□□□□□ -0.82
ACTN1-208ENST00000553370 MAZP56270 477 aaKnown RBP9.92□□□□□ -0.82
ACTN1-208ENST00000553370 IL10RBQ08334 325 aa9.92□□□□□ -0.82
ACTN1-208ENST00000553370 LBRQ14739 615 aaKnown RBP9.92□□□□□ -0.82
ACTN1-208ENST00000553370 PNCKQ6P2M8 343 aa9.92□□□□□ -0.82
ACTN1-208ENST00000553370 TMCO3Q6UWJ1 677 aa9.92□□□□□ -0.82
ACTN1-208ENST00000553370 LIPIQ6XZB0 460 aa9.92□□□□□ -0.82
ACTN1-208ENST00000553370 DNAJC14Q6Y2X3 702 aaPredicted RBP9.92□□□□□ -0.82
ACTN1-208ENST00000553370 ZFAND4Q86XD8 727 aa9.92□□□□□ -0.82
ACTN1-208ENST00000553370 NDUFAF2Q8N183 169 aa9.92□□□□□ -0.82
ACTN1-208ENST00000553370 GPR156Q8NFN8 814 aa9.92□□□□□ -0.82
ACTN1-208ENST00000553370 USP7Q93009 1102 aa9.92□□□□□ -0.82
ACTN1-208ENST00000553370 TRIM11Q96F44 468 aa9.92□□□□□ -0.82
ACTN1-208ENST00000553370 AHCYL2Q96HN2 611 aaKnown RBP9.92□□□□□ -0.82
ACTN1-208ENST00000553370 GBP4Q96PP9 640 aa9.92□□□□□ -0.82
ACTN1-208ENST00000553370 TRIM4Q9C037 500 aa9.92□□□□□ -0.82
ACTN1-208ENST00000553370 CDH19Q9H159 772 aa9.92□□□□□ -0.82
ACTN1-208ENST00000553370 RDH14Q9HBH5 336 aa9.92□□□□□ -0.82
ACTN1-208ENST00000553370 KCTD5Q9NXV2 234 aa9.92□□□□□ -0.82
ACTN1-208ENST00000553370 MYO1AQ9UBC5 1043 aa9.92□□□□□ -0.82
ACTN1-208ENST00000553370 LIMA1Q9UHB6 759 aaKnown RBP9.92□□□□□ -0.82
ACTN1-208ENST00000553370 APPL1Q9UKG1 709 aa9.92□□□□□ -0.82
ACTN1-208ENST00000553370 SPTBN1Q01082 2364 aaKnown RBP9.92□□□□□ -0.82
ACTN1-208ENST00000553370 STMND1H3BQB6 276 aa9.91□□□□□ -0.82
ACTN1-208ENST00000553370 SOCS5O75159 536 aa9.91□□□□□ -0.82
ACTN1-208ENST00000553370 ITGB2P05107 769 aa9.91□□□□□ -0.82
ACTN1-208ENST00000553370 FAM87AP0C7U9 286 aa9.91□□□□□ -0.82
ACTN1-208ENST00000553370 CCNB1P14635 433 aa9.91□□□□□ -0.82
ACTN1-208ENST00000553370 CD82P27701 267 aa9.91□□□□□ -0.82
ACTN1-208ENST00000553370 CSTF2P33240 577 aaKnown RBP eCLIP9.91□□□□□ -0.82
ACTN1-208ENST00000553370 SERPINB6P35237 376 aa9.91□□□□□ -0.82
ACTN1-208ENST00000553370 ANP32AP39687 249 aaKnown RBP9.91□□□□□ -0.82
ACTN1-208ENST00000553370 SSR1P43307 286 aaKnown RBP9.91□□□□□ -0.82
ACTN1-208ENST00000553370 ZNF135P52742 658 aaPredicted RBP9.91□□□□□ -0.82
ACTN1-208ENST00000553370 EPHB1P54762 984 aa9.91□□□□□ -0.82
ACTN1-208ENST00000553370 OR1D5P58170 312 aa9.91□□□□□ -0.82
ACTN1-208ENST00000553370 OGDHQ02218 1023 aa9.91□□□□□ -0.82
ACTN1-208ENST00000553370 ITKQ08881 620 aa9.91□□□□□ -0.82
ACTN1-208ENST00000553370 RALGDSQ12967 914 aa9.91□□□□□ -0.82
ACTN1-208ENST00000553370 MAMLD1Q13495 774 aa9.91□□□□□ -0.82
ACTN1-208ENST00000553370 HLTFQ14527 1009 aaKnown RBP eCLIP9.91□□□□□ -0.82
ACTN1-208ENST00000553370 CA9Q16790 459 aa9.91□□□□□ -0.82
ACTN1-208ENST00000553370 FILIP1LQ4L180 1135 aa9.91□□□□□ -0.82
ACTN1-208ENST00000553370 C4orf48Q5BLP8 95 aa9.91□□□□□ -0.82
ACTN1-208ENST00000553370 ARHGAP36Q6ZRI8 547 aa9.91□□□□□ -0.82
ACTN1-208ENST00000553370 USP45Q70EL2 814 aa9.91□□□□□ -0.82
ACTN1-208ENST00000553370 FAM129CQ86XR2 697 aa9.91□□□□□ -0.82
ACTN1-208ENST00000553370 LZTR1Q8N653 840 aa9.91□□□□□ -0.82
ACTN1-208ENST00000553370 AOPEPQ8N6M6 819 aa9.91□□□□□ -0.82
ACTN1-208ENST00000553370 IL22RA1Q8N6P7 574 aa9.91□□□□□ -0.82
ACTN1-208ENST00000553370 CCL4L1Q8NHW4 92 aa9.91□□□□□ -0.82
ACTN1-208ENST00000553370 JPH3Q8WXH2 748 aaPredicted RBP9.91□□□□□ -0.82
ACTN1-208ENST00000553370 HSPH1Q92598 858 aa9.91□□□□□ -0.82
ACTN1-208ENST00000553370 NAT10Q9H0A0 1025 aaKnown RBP9.91□□□□□ -0.82
ACTN1-208ENST00000553370 STN1Q9H668 368 aaKnown RBP9.91□□□□□ -0.82
ACTN1-208ENST00000553370 MRPL47Q9HD33 250 aaKnown RBP9.91□□□□□ -0.82
ACTN1-208ENST00000553370 HAUS2Q9NVX0 235 aa9.91□□□□□ -0.82
ACTN1-208ENST00000553370 FOXJ2Q9P0K8 574 aa9.91□□□□□ -0.82
ACTN1-208ENST00000553370 TAAR2Q9P1P5 351 aa9.91□□□□□ -0.82
ACTN1-208ENST00000553370 CNOT8Q9UFF9 292 aaKnown RBP9.91□□□□□ -0.82
ACTN1-208ENST00000553370 TTLL3Q9Y4R7 772 aa9.91□□□□□ -0.82
ACTN1-208ENST00000553370 PCDHGA11Q9Y5H2 935 aa9.91□□□□□ -0.82
ACTN1-208ENST00000553370 COL12A1Q99715 3063 aa9.91□□□□□ -0.82
ACTN1-208ENST00000553370 A0A1W2PQC6 194 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 TTC24A2A3L6 582 aaPredicted RBP9.9□□□□□ -0.82
ACTN1-208ENST00000553370 NOBOXO60393 691 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 PPFIA2O75334 1257 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 WISP1O95388 367 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms