RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 ESRP1Q6NXG1 681 aaKnown RBP14.1□□□□□ -0.15
PTCH1-226ENST00000553011 NYAP1Q6ZVC0 841 aa14.1□□□□□ -0.15
PTCH1-226ENST00000553011 GATAD2AQ86YP4 633 aa14.1□□□□□ -0.15
PTCH1-226ENST00000553011 DCP2Q8IU60 420 aaKnown RBP14.1□□□□□ -0.15
PTCH1-226ENST00000553011 GLIS1Q8NBF1 620 aa14.1□□□□□ -0.15
PTCH1-226ENST00000553011 SCAMP4Q969E2 229 aa14.1□□□□□ -0.15
PTCH1-226ENST00000553011 APOOQ9BUR5 198 aa14.1□□□□□ -0.15
PTCH1-226ENST00000553011 FSD1LQ9BXM9 530 aa14.1□□□□□ -0.15
PTCH1-226ENST00000553011 ABCG8Q9H221 673 aa14.1□□□□□ -0.15
PTCH1-226ENST00000553011 MAGEE1Q9HCI5 957 aa14.1□□□□□ -0.15
PTCH1-226ENST00000553011 ZKSCAN5Q9Y2L8 839 aa14.1□□□□□ -0.15
PTCH1-226ENST00000553011 ZFC3H1O60293 1989 aaKnown RBP14.1□□□□□ -0.15
PTCH1-226ENST00000553011 GOLGA6CA6NDK9 693 aa14.09□□□□□ -0.15
PTCH1-226ENST00000553011 GOLGA6BA6NDN3 693 aa14.09□□□□□ -0.15
PTCH1-226ENST00000553011 AURKAO14965 403 aa14.09□□□□□ -0.15
PTCH1-226ENST00000553011 FANCGO15287 622 aa14.09□□□□□ -0.15
PTCH1-226ENST00000553011 USP12O75317 370 aa14.09□□□□□ -0.15
PTCH1-226ENST00000553011 FGF1P05230 155 aa14.09□□□□□ -0.15
PTCH1-226ENST00000553011 GOLGA6DP0CG33 693 aa14.09□□□□□ -0.15
PTCH1-226ENST00000553011 HLA-DPA1P20036 260 aa14.09□□□□□ -0.15
PTCH1-226ENST00000553011 EPHA8P29322 1005 aaPredicted RBP14.09□□□□□ -0.15
PTCH1-226ENST00000553011 TNNT3P45378 269 aaPredicted RBP14.09□□□□□ -0.15
PTCH1-226ENST00000553011 RXRGP48443 463 aa14.09□□□□□ -0.15
PTCH1-226ENST00000553011 ARRB1P49407 418 aaPredicted RBP14.09□□□□□ -0.15
PTCH1-226ENST00000553011 EIF2B5Q13144 721 aaKnown RBP14.09□□□□□ -0.15
PTCH1-226ENST00000553011 SLC14A1Q13336 389 aa14.09□□□□□ -0.15
PTCH1-226ENST00000553011 PUM1Q14671 1186 aaKnown RBP eCLIP14.09□□□□□ -0.15
PTCH1-226ENST00000553011 KCTD19Q17RG1 926 aaPredicted RBP14.09□□□□□ -0.15
PTCH1-226ENST00000553011 P3H1Q32P28 736 aa14.09□□□□□ -0.15
PTCH1-226ENST00000553011 PNCKQ6P2M8 343 aa14.09□□□□□ -0.15
PTCH1-226ENST00000553011 DRICH1Q6PGQ1 229 aaPredicted RBP14.09□□□□□ -0.15
PTCH1-226ENST00000553011 RANBP10Q6VN20 620 aa14.09□□□□□ -0.15
PTCH1-226ENST00000553011 KLHDC8BQ8IXV7 354 aa14.09□□□□□ -0.15
PTCH1-226ENST00000553011 OXR1Q8N573 874 aa14.09□□□□□ -0.15
PTCH1-226ENST00000553011 AP2M1Q96CW1 435 aa14.09□□□□□ -0.15
PTCH1-226ENST00000553011 AP1M1Q9BXS5 423 aa14.09□□□□□ -0.15
PTCH1-226ENST00000553011 GPR63Q9BZJ6 419 aa14.09□□□□□ -0.15
PTCH1-226ENST00000553011 ZFYVE1Q9HBF4 777 aa14.09□□□□□ -0.15
PTCH1-226ENST00000553011 KCND1Q9NSA2 647 aa14.09□□□□□ -0.15
PTCH1-226ENST00000553011 DNAJC28Q9NX36 388 aa14.09□□□□□ -0.15
PTCH1-226ENST00000553011 GOLGA6AQ9NYA3 693 aa14.09□□□□□ -0.15
PTCH1-226ENST00000553011 KLF15Q9UIH9 416 aa14.09□□□□□ -0.15
PTCH1-226ENST00000553011 PNMA8BQ9ULN7 279 aaPredicted RBP14.09□□□□□ -0.15
PTCH1-226ENST00000553011 TTC7AQ9ULT0 858 aaPredicted RBP14.09□□□□□ -0.15
PTCH1-226ENST00000553011 DRG1Q9Y295 367 aaKnown RBP14.09□□□□□ -0.15
PTCH1-226ENST00000553011 BTBD3Q9Y2F9 522 aa14.09□□□□□ -0.15
PTCH1-226ENST00000553011 AAR2Q9Y312 384 aaKnown RBP14.09□□□□□ -0.15
PTCH1-226ENST00000553011 DCHS1Q96JQ0 3298 aa14.09□□□□□ -0.15
PTCH1-226ENST00000553011 DNAH14Q0VDD8 3507 aa14.09□□□□□ -0.15
PTCH1-226ENST00000553011 NCOR2Q9Y618 2525 aa14.08□□□□□ -0.15
PTCH1-226ENST00000553011 ZNF106Q9H2Y7 1883 aaKnown RBP14.08□□□□□ -0.16
PTCH1-226ENST00000553011 PGRMC1O00264 195 aaKnown RBP14.08□□□□□ -0.16
PTCH1-226ENST00000553011 TOR1BO14657 336 aa14.08□□□□□ -0.16
PTCH1-226ENST00000553011 SH3BP5O60239 455 aa14.08□□□□□ -0.16
PTCH1-226ENST00000553011 PCDHGA12O60330 932 aa14.08□□□□□ -0.16
PTCH1-226ENST00000553011 SDC3O75056 442 aa14.08□□□□□ -0.16
PTCH1-226ENST00000553011 ZSCAN5DPP0CG00 497 aa14.08□□□□□ -0.16
PTCH1-226ENST00000553011 TSHRP16473 764 aa14.08□□□□□ -0.16
PTCH1-226ENST00000553011 TRIM23P36406 574 aa14.08□□□□□ -0.16
PTCH1-226ENST00000553011 SPINT3P49223 89 aa14.08□□□□□ -0.16
PTCH1-226ENST00000553011 NFATC4Q14934 902 aa14.08□□□□□ -0.16
PTCH1-226ENST00000553011 KCTD11Q693B1 232 aa14.08□□□□□ -0.16
PTCH1-226ENST00000553011 RAET1GQ6H3X3 334 aa14.08□□□□□ -0.16
PTCH1-226ENST00000553011 MACC1Q6ZN28 852 aa14.08□□□□□ -0.16
PTCH1-226ENST00000553011 TMC3Q7Z5M5 1100 aa14.08□□□□□ -0.16
PTCH1-226ENST00000553011 PIP4P1Q86T03 277 aa14.08□□□□□ -0.16
PTCH1-226ENST00000553011 PARGQ86W56 976 aa14.08□□□□□ -0.16
PTCH1-226ENST00000553011 CCDC89Q8N998 374 aa14.08□□□□□ -0.16
PTCH1-226ENST00000553011 DEFB124Q8NES8 71 aa14.08□□□□□ -0.16
PTCH1-226ENST00000553011 CCHCR1Q8TD31 782 aa14.08□□□□□ -0.16
PTCH1-226ENST00000553011 SAP25Q8TEE9 199 aa14.08□□□□□ -0.16
PTCH1-226ENST00000553011 FUBP1Q96AE4 644 aaKnown RBP14.08□□□□□ -0.16
PTCH1-226ENST00000553011 CAMK1GQ96NX5 476 aa14.08□□□□□ -0.16
PTCH1-226ENST00000553011 PPP1R2P1Q96PQ5 205 aa14.08□□□□□ -0.16
PTCH1-226ENST00000553011 AGAP2Q99490 1192 aa14.08□□□□□ -0.16
PTCH1-226ENST00000553011 NAPGQ99747 312 aaPredicted RBP14.08□□□□□ -0.16
PTCH1-226ENST00000553011 TBL1YQ9BQ87 522 aa14.08□□□□□ -0.16
PTCH1-226ENST00000553011 RIOK2Q9BVS4 552 aaKnown RBP14.08□□□□□ -0.16
PTCH1-226ENST00000553011 LGR4Q9BXB1 951 aa14.08□□□□□ -0.16
PTCH1-226ENST00000553011 WDR26Q9H7D7 661 aa14.08□□□□□ -0.16
PTCH1-226ENST00000553011 KCTD5Q9NXV2 234 aa14.08□□□□□ -0.16
PTCH1-226ENST00000553011 PCDHGB2Q9Y5G2 931 aa14.08□□□□□ -0.16
PTCH1-226ENST00000553011 PLXNB3Q9ULL4 1909 aa14.07□□□□□ -0.16
PTCH1-226ENST00000553011 YKT6O15498 198 aa14.07□□□□□ -0.16
PTCH1-226ENST00000553011 SOD1P00441 154 aa14.07□□□□□ -0.16
PTCH1-226ENST00000553011 TCP1P17987 556 aaKnown RBP14.07□□□□□ -0.16
PTCH1-226ENST00000553011 RPL22P35268 128 aaKnown RBP14.07□□□□□ -0.16
PTCH1-226ENST00000553011 GPR1P46091 355 aa14.07□□□□□ -0.16
PTCH1-226ENST00000553011 KIAA1024LP59773 190 aa14.07□□□□□ -0.16
PTCH1-226ENST00000553011 DPTQ07507 201 aa14.07□□□□□ -0.16
PTCH1-226ENST00000553011 PTK2BQ14289 1009 aa14.07□□□□□ -0.16
PTCH1-226ENST00000553011 PAPD7Q5XG87 772 aaKnown RBP14.07□□□□□ -0.16
PTCH1-226ENST00000553011 ALS2CLQ60I27 953 aa14.07□□□□□ -0.16
PTCH1-226ENST00000553011 KCTD16Q68DU8 428 aa14.07□□□□□ -0.16
PTCH1-226ENST00000553011 DENND5AQ6IQ26 1287 aa14.07□□□□□ -0.16
PTCH1-226ENST00000553011 TTC27Q6P3X3 843 aa14.07□□□□□ -0.16
PTCH1-226ENST00000553011 ENPP7Q6UWV6 458 aa14.07□□□□□ -0.16
PTCH1-226ENST00000553011 DBX2Q6ZNG2 339 aa14.07□□□□□ -0.16
PTCH1-226ENST00000553011 ZNF765Q7L2R6 523 aa14.07□□□□□ -0.16
PTCH1-226ENST00000553011 KANSL1Q7Z3B3 1105 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms