RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 SPTBN2O15020 2390 aa11.71□□□□□ -0.54
TRAFD1-209ENST00000552896 GOLGA6CA6NDK9 693 aa11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 GOLGA6BA6NDN3 693 aa11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 PGRMC1O00264 195 aaKnown RBP11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 PYGLP06737 847 aa11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 GOLGA6DP0CG33 693 aa11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 NME1P15531 152 aaKnown RBP11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 CSRP1P21291 193 aaKnown RBP11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 STIP1P31948 543 aaKnown RBP11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 ADRA1AP35348 466 aa11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 DCDC1P59894 354 aa11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 PTSQ03393 145 aa11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 INPP5AQ14642 412 aa11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 NFATC4Q14934 902 aa11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 SHBQ15464 509 aa11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 SLC1A5Q15758 541 aa11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 LONRF2Q1L5Z9 754 aa11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 SIRPB2Q5JXA9 342 aa11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 TPRG1LQ5T0D9 272 aa11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 KDM7AQ6ZMT4 941 aa11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 Q6ZVL8 140 aa11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 LYSMD3Q7Z3D4 306 aa11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 KDELC2Q7Z4H8 507 aa11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 TECPR1Q7Z6L1 1165 aa11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 NAXDQ8IW45 347 aa11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 PLA2G15Q8NCC3 412 aa11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 ATL2Q8NHH9 583 aa11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 CCHCR1Q8TD31 782 aa11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 LRRC45Q96CN5 670 aa11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 OSBPL9Q96SU4 736 aa11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 FICDQ9BVA6 458 aa11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 CDH19Q9H159 772 aa11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 TRABDQ9H4I3 376 aa11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 WDR26Q9H7D7 661 aa11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 GOLGA6AQ9NYA3 693 aa11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 PKD2L2Q9NZM6 624 aa11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 HACD3Q9P035 362 aa11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 NFKBIL1Q9UBC1 381 aaPredicted RBP11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 SNX12Q9UMY4 172 aa11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 ZNF148Q9UQR1 794 aa11.7□□□□□ -0.54
TRAFD1-209ENST00000552896 PTPRBP23467 1997 aa11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 A0A0U1RQS6 177 aa11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 RGSL1A5PLK6 1076 aa11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 H3BM21 787 aa11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 K7ESM1 405 aa11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 CLDN7O95471 211 aa11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 HOXC4P09017 264 aaPredicted RBP11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 MYCLP1P12525 358 aaPredicted RBP11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 TCP1P17987 556 aaKnown RBP11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 HTR1BP28222 390 aa11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 ACTN2P35609 894 aa11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 TRIM23P36406 574 aa11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 GRK6P43250 576 aa11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 CHRNA4P43681 627 aa11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 SPINT3P49223 89 aa11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 IL9RQ01113 521 aa11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 SUZ12Q15022 739 aaKnown RBP11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 PARP6Q2NL67 630 aa11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 HENMT1Q5T8I9 393 aaKnown RBP11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 RAET1GQ6H3X3 334 aa11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 PNCKQ6P2M8 343 aa11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 DBX2Q6ZNG2 339 aa11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 KANSL1Q7Z3B3 1105 aa11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 CCDC89Q8N998 374 aa11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 BAHD1Q8TBE0 780 aaPredicted RBP11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 ACTRT1Q8TDG2 376 aa11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 SAP25Q8TEE9 199 aa11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 TBATAQ96M53 351 aa11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 TBL1YQ9BQ87 522 aa11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 APOOQ9BUR5 198 aa11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 LRRC40Q9H9A6 602 aa11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 ZFYVE1Q9HBF4 777 aa11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 RAD18Q9NS91 495 aa11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 DNAJC28Q9NX36 388 aa11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 FEZ2Q9UHY8 353 aaPredicted RBP11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 OR1A2Q9Y585 309 aa11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 PIKFYVEQ9Y2I7 2098 aa11.69□□□□□ -0.54
TRAFD1-209ENST00000552896 ERI2A8K979 691 aaKnown RBP11.68□□□□□ -0.54
TRAFD1-209ENST00000552896 CACNB4O00305 520 aaPredicted RBP11.68□□□□□ -0.54
TRAFD1-209ENST00000552896 PIAS2O75928 621 aa11.68□□□□□ -0.54
TRAFD1-209ENST00000552896 SOD1P00441 154 aa11.68□□□□□ -0.54
TRAFD1-209ENST00000552896 IFNB1P01574 187 aa11.68□□□□□ -0.54
TRAFD1-209ENST00000552896 CSF2P04141 144 aa11.68□□□□□ -0.54
TRAFD1-209ENST00000552896 PIRTP0C851 137 aa11.68□□□□□ -0.54
TRAFD1-209ENST00000552896 KELP23276 732 aa11.68□□□□□ -0.54
TRAFD1-209ENST00000552896 FDFT1P37268 417 aa11.68□□□□□ -0.54
TRAFD1-209ENST00000552896 GNG11P61952 73 aa11.68□□□□□ -0.54
TRAFD1-209ENST00000552896 HNRNPKP61978 463 aaKnown RBP eCLIP11.68□□□□□ -0.54
TRAFD1-209ENST00000552896 EIF2B5Q13144 721 aaKnown RBP11.68□□□□□ -0.54
TRAFD1-209ENST00000552896 SNX1Q13596 522 aa11.68□□□□□ -0.54
TRAFD1-209ENST00000552896 KCTD11Q693B1 232 aa11.68□□□□□ -0.54
TRAFD1-209ENST00000552896 ADAMTSL4Q6UY14 1074 aa11.68□□□□□ -0.54
TRAFD1-209ENST00000552896 RANBP10Q6VN20 620 aa11.68□□□□□ -0.54
TRAFD1-209ENST00000552896 GLT6D1Q7Z4J2 308 aa11.68□□□□□ -0.54
TRAFD1-209ENST00000552896 TMC3Q7Z5M5 1100 aa11.68□□□□□ -0.54
TRAFD1-209ENST00000552896 NLRP8Q86W28 1048 aa11.68□□□□□ -0.54
TRAFD1-209ENST00000552896 HEATR4Q86WZ0 1026 aa11.68□□□□□ -0.54
TRAFD1-209ENST00000552896 PELI3Q8N2H9 469 aa11.68□□□□□ -0.54
TRAFD1-209ENST00000552896 PRELID2Q8N945 189 aa11.68□□□□□ -0.54
TRAFD1-209ENST00000552896 ZNF548Q8NEK5 533 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms