RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 ERVW-1Q9UQF0 538 aa19.68■□□□□ 0.74
SSH1-209ENST00000551165 TARM1B6A8C7 271 aa19.67■□□□□ 0.74
SSH1-209ENST00000551165 KLHL2O95198 593 aa19.67■□□□□ 0.74
SSH1-209ENST00000551165 DLDP09622 509 aaKnown RBP19.67■□□□□ 0.74
SSH1-209ENST00000551165 RALBP11234 206 aa19.67■□□□□ 0.74
SSH1-209ENST00000551165 ADH5P11766 374 aa19.67■□□□□ 0.74
SSH1-209ENST00000551165 SLC6A11P48066 632 aa19.67■□□□□ 0.74
SSH1-209ENST00000551165 XIAPP98170 497 aa19.67■□□□□ 0.74
SSH1-209ENST00000551165 HYAL1Q12794 435 aa19.67■□□□□ 0.74
SSH1-209ENST00000551165 CARD16Q5EG05 197 aa19.67■□□□□ 0.74
SSH1-209ENST00000551165 SYCE2Q6PIF2 218 aa19.67■□□□□ 0.74
SSH1-209ENST00000551165 YTHDF3Q7Z739 585 aaKnown RBP19.67■□□□□ 0.74
SSH1-209ENST00000551165 ZNF366Q8N895 744 aa19.67■□□□□ 0.74
SSH1-209ENST00000551165 GABPB2Q8TAK5 448 aaPredicted RBP19.67■□□□□ 0.74
SSH1-209ENST00000551165 ISG20Q96AZ6 181 aaKnown RBP19.67■□□□□ 0.74
SSH1-209ENST00000551165 SGF29Q96ES7 293 aa19.67■□□□□ 0.74
SSH1-209ENST00000551165 CCDC97Q96F63 343 aaPredicted RBP19.67■□□□□ 0.74
SSH1-209ENST00000551165 C7orf26Q96N11 449 aa19.67■□□□□ 0.74
SSH1-209ENST00000551165 FBXO10Q9UK96 956 aa19.67■□□□□ 0.74
SSH1-209ENST00000551165 C1orf232A0A0U1RR37 186 aa19.66■□□□□ 0.74
SSH1-209ENST00000551165 UBA6A0AVT1 1052 aaPredicted RBP19.66■□□□□ 0.74
SSH1-209ENST00000551165 SLC9A3R1O14745 358 aaPredicted RBP19.66■□□□□ 0.74
SSH1-209ENST00000551165 SOCS5O75159 536 aa19.66■□□□□ 0.74
SSH1-209ENST00000551165 SERPINA4P29622 427 aa19.66■□□□□ 0.74
SSH1-209ENST00000551165 FMO4P31512 558 aa19.66■□□□□ 0.74
SSH1-209ENST00000551165 ZRANB3Q5FWF4 1079 aa19.66■□□□□ 0.74
SSH1-209ENST00000551165 SFTPA1Q8IWL2 248 aa19.66■□□□□ 0.74
SSH1-209ENST00000551165 CNPY4Q8N129 248 aa19.66■□□□□ 0.74
SSH1-209ENST00000551165 OR2A12Q8NGT7 310 aa19.66■□□□□ 0.74
SSH1-209ENST00000551165 OR6Y1Q8NGX8 325 aa19.66■□□□□ 0.74
SSH1-209ENST00000551165 BPIFB1Q8TDL5 484 aa19.66■□□□□ 0.74
SSH1-209ENST00000551165 SMARCD2Q92925 531 aa19.66■□□□□ 0.74
SSH1-209ENST00000551165 CIPCQ9C0C6 399 aa19.66■□□□□ 0.74
SSH1-209ENST00000551165 GPAMQ9HCL2 828 aa19.66■□□□□ 0.74
SSH1-209ENST00000551165 NPIPB15A6NHN6 443 aaPredicted RBP19.66■□□□□ 0.74
SSH1-209ENST00000551165 HEPACAM2A8MVW5 462 aa19.66■□□□□ 0.74
SSH1-209ENST00000551165 UBOX5O94941 541 aa19.66■□□□□ 0.74
SSH1-209ENST00000551165 WISP3O95389 354 aaPredicted RBP19.66■□□□□ 0.74
SSH1-209ENST00000551165 UGT2B4P06133 528 aa19.66■□□□□ 0.74
SSH1-209ENST00000551165 CCDC166P0CW27 439 aa19.66■□□□□ 0.74
SSH1-209ENST00000551165 POLR2EP19388 210 aaKnown RBP19.66■□□□□ 0.74
SSH1-209ENST00000551165 OGNP20774 298 aaKnown RBP19.66■□□□□ 0.74
SSH1-209ENST00000551165 HMGCLP35914 325 aa19.66■□□□□ 0.74
SSH1-209ENST00000551165 SLC1A6P48664 564 aa19.66■□□□□ 0.74
SSH1-209ENST00000551165 COL13A1Q5TAT6 717 aaPredicted RBP19.66■□□□□ 0.74
SSH1-209ENST00000551165 GPR149Q86SP6 731 aa19.66■□□□□ 0.74
SSH1-209ENST00000551165 SDCCAG8Q86SQ7 713 aaPredicted RBP19.66■□□□□ 0.74
SSH1-209ENST00000551165 METTL3Q86U44 580 aaKnown RBP19.66■□□□□ 0.74
SSH1-209ENST00000551165 AHI1Q8N157 1196 aa19.66■□□□□ 0.74
SSH1-209ENST00000551165 GRIN3AQ8TCU5 1115 aa19.66■□□□□ 0.74
SSH1-209ENST00000551165 LPGAT1Q92604 370 aa19.66■□□□□ 0.74
SSH1-209ENST00000551165 MRPL38Q96DV4 380 aaKnown RBP19.66■□□□□ 0.74
SSH1-209ENST00000551165 TRIM55Q9BYV6 548 aa19.66■□□□□ 0.74
SSH1-209ENST00000551165 HACD3Q9P035 362 aa19.66■□□□□ 0.74
SSH1-209ENST00000551165 MED16Q9Y2X0 877 aa19.66■□□□□ 0.74
SSH1-209ENST00000551165 ANTXRLA6NF34 631 aa19.65■□□□□ 0.74
SSH1-209ENST00000551165 IL1BP01584 269 aa19.65■□□□□ 0.74
SSH1-209ENST00000551165 TROVE2P10155 538 aaKnown RBP eCLIP19.65■□□□□ 0.74
SSH1-209ENST00000551165 COL6A2P12110 1019 aa19.65■□□□□ 0.74
SSH1-209ENST00000551165 FCARP24071 287 aa19.65■□□□□ 0.74
SSH1-209ENST00000551165 MAPK8P45983 427 aa19.65■□□□□ 0.74
SSH1-209ENST00000551165 CCR10P46092 362 aa19.65■□□□□ 0.74
SSH1-209ENST00000551165 RAB30Q15771 203 aa19.65■□□□□ 0.74
SSH1-209ENST00000551165 GAB4Q2WGN9 574 aa19.65■□□□□ 0.74
SSH1-209ENST00000551165 TANGO2Q6ICL3 276 aa19.65■□□□□ 0.74
SSH1-209ENST00000551165 TBC1D1Q86TI0 1168 aaPredicted RBP19.65■□□□□ 0.74
SSH1-209ENST00000551165 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.65■□□□□ 0.74
SSH1-209ENST00000551165 TTC8Q8TAM2 541 aa19.65■□□□□ 0.74
SSH1-209ENST00000551165 RAB3IL1Q8TBN0 382 aa19.65■□□□□ 0.74
SSH1-209ENST00000551165 FRS2Q8WU20 508 aa19.65■□□□□ 0.74
SSH1-209ENST00000551165 SORT1Q99523 831 aa19.65■□□□□ 0.74
SSH1-209ENST00000551165 SUV39H2Q9H5I1 410 aa19.65■□□□□ 0.74
SSH1-209ENST00000551165 ZFYVE1Q9HBF4 777 aa19.65■□□□□ 0.74
SSH1-209ENST00000551165 THAP1Q9NVV9 213 aa19.65■□□□□ 0.74
SSH1-209ENST00000551165 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.65■□□□□ 0.74
SSH1-209ENST00000551165 GALPQ9UBC7 116 aa19.65■□□□□ 0.74
SSH1-209ENST00000551165 A0A087X1B8 175 aa19.65■□□□□ 0.74
SSH1-209ENST00000551165 GAPDHSO14556 408 aaPredicted RBP19.65■□□□□ 0.74
SSH1-209ENST00000551165 TULP3O75386 442 aa19.65■□□□□ 0.74
SSH1-209ENST00000551165 SERPINE1P05121 402 aa19.65■□□□□ 0.74
SSH1-209ENST00000551165 FDXRP22570 491 aa19.65■□□□□ 0.74
SSH1-209ENST00000551165 DGKGP49619 791 aa19.65■□□□□ 0.74
SSH1-209ENST00000551165 PTPRNQ16849 979 aa19.65■□□□□ 0.74
SSH1-209ENST00000551165 SETMARQ53H47 684 aaPredicted RBP19.65■□□□□ 0.74
SSH1-209ENST00000551165 PCDH20Q8N6Y1 951 aaKnown RBP19.65■□□□□ 0.74
SSH1-209ENST00000551165 ECHDC3Q96DC8 303 aa19.65■□□□□ 0.74
SSH1-209ENST00000551165 UBXN10Q96LJ8 280 aa19.65■□□□□ 0.74
SSH1-209ENST00000551165 PKP3Q9Y446 797 aa19.65■□□□□ 0.74
SSH1-209ENST00000551165 USH1CQ9Y6N9 552 aa19.65■□□□□ 0.74
SSH1-209ENST00000551165 ATXN2Q99700 1313 aaKnown RBP19.65■□□□□ 0.74
SSH1-209ENST00000551165 NEMP2A6NFY4 417 aa19.64■□□□□ 0.74
SSH1-209ENST00000551165 MYL2P10916 166 aa19.64■□□□□ 0.74
SSH1-209ENST00000551165 FAM151BQ6UXP7 276 aa19.64■□□□□ 0.74
SSH1-209ENST00000551165 ZYG11AQ6WRX3 759 aa19.64■□□□□ 0.74
SSH1-209ENST00000551165 RFLNAQ6ZTI6 216 aa19.64■□□□□ 0.74
SSH1-209ENST00000551165 NXPE3Q969Y0 559 aa19.64■□□□□ 0.74
SSH1-209ENST00000551165 TSNARE1Q96NA8 513 aa19.64■□□□□ 0.74
SSH1-209ENST00000551165 BIRC8Q96P09 236 aa19.64■□□□□ 0.74
SSH1-209ENST00000551165 AARSD1Q9BTE6 412 aaKnown RBP19.64■□□□□ 0.74
SSH1-209ENST00000551165 TMEM120AQ9BXJ8 343 aa19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms