RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 ITPKBP27987 946 aa13.01□□□□□ -0.33
NPAS3-209ENST00000551008 HTR1BP28222 390 aa13.01□□□□□ -0.33
NPAS3-209ENST00000551008 TEAD1P28347 426 aa13.01□□□□□ -0.33
NPAS3-209ENST00000551008 NOP2P46087 812 aaKnown RBP13.01□□□□□ -0.33
NPAS3-209ENST00000551008 BLKP51451 505 aa13.01□□□□□ -0.33
NPAS3-209ENST00000551008 CDK3Q00526 305 aa13.01□□□□□ -0.33
NPAS3-209ENST00000551008 ELOCQ15369 112 aa13.01□□□□□ -0.33
NPAS3-209ENST00000551008 ISXQ2M1V0 245 aa13.01□□□□□ -0.33
NPAS3-209ENST00000551008 OGFOD3Q6PK18 319 aa13.01□□□□□ -0.33
NPAS3-209ENST00000551008 LVRNQ6Q4G3 990 aa13.01□□□□□ -0.33
NPAS3-209ENST00000551008 USP45Q70EL2 814 aa13.01□□□□□ -0.33
NPAS3-209ENST00000551008 GAS2L3Q86XJ1 694 aa13.01□□□□□ -0.33
NPAS3-209ENST00000551008 MAP7D3Q8IWC1 876 aa13.01□□□□□ -0.33
NPAS3-209ENST00000551008 ARL10Q8N8L6 244 aa13.01□□□□□ -0.33
NPAS3-209ENST00000551008 TPCN2Q8NHX9 752 aa13.01□□□□□ -0.33
NPAS3-209ENST00000551008 SNIP1Q8TAD8 396 aaKnown RBP13.01□□□□□ -0.33
NPAS3-209ENST00000551008 NSMCE1Q8WV22 266 aa13.01□□□□□ -0.33
NPAS3-209ENST00000551008 SCAMP4Q969E2 229 aa13.01□□□□□ -0.33
NPAS3-209ENST00000551008 RNF25Q96BH1 459 aaPredicted RBP13.01□□□□□ -0.33
NPAS3-209ENST00000551008 TADA1Q96BN2 335 aa13.01□□□□□ -0.33
NPAS3-209ENST00000551008 EID2BQ96D98 161 aa13.01□□□□□ -0.33
NPAS3-209ENST00000551008 TRIB3Q96RU7 358 aa13.01□□□□□ -0.33
NPAS3-209ENST00000551008 CYP4F12Q9HCS2 524 aa13.01□□□□□ -0.33
NPAS3-209ENST00000551008 SIRPGQ9P1W8 387 aa13.01□□□□□ -0.33
NPAS3-209ENST00000551008 CD84Q9UIB8 345 aa13.01□□□□□ -0.33
NPAS3-209ENST00000551008 PADI4Q9UM07 663 aa13.01□□□□□ -0.33
NPAS3-209ENST00000551008 PCYT1BQ9Y5K3 369 aaPredicted RBP13.01□□□□□ -0.33
NPAS3-209ENST00000551008 A0A1W2PQM1 296 aa13□□□□□ -0.33
NPAS3-209ENST00000551008 TNFP01375 233 aa13□□□□□ -0.33
NPAS3-209ENST00000551008 MPOP05164 745 aa13□□□□□ -0.33
NPAS3-209ENST00000551008 TPM1P09493 284 aa13□□□□□ -0.33
NPAS3-209ENST00000551008 PECAM1P16284 738 aaPredicted RBP13□□□□□ -0.33
NPAS3-209ENST00000551008 MX2P20592 715 aa13□□□□□ -0.33
NPAS3-209ENST00000551008 CDKN2BP42772 138 aa13□□□□□ -0.33
NPAS3-209ENST00000551008 POLD2P49005 469 aa13□□□□□ -0.33
NPAS3-209ENST00000551008 DPTQ07507 201 aa13□□□□□ -0.33
NPAS3-209ENST00000551008 ITKQ08881 620 aa13□□□□□ -0.33
NPAS3-209ENST00000551008 QPCTQ16769 361 aa13□□□□□ -0.33
NPAS3-209ENST00000551008 TRIM74Q86UV6 250 aa13□□□□□ -0.33
NPAS3-209ENST00000551008 PAF1Q8N7H5 531 aa13□□□□□ -0.33
NPAS3-209ENST00000551008 HNRNPLLQ8WVV9 542 aaKnown RBP13□□□□□ -0.33
NPAS3-209ENST00000551008 CCDC74AQ96AQ1 378 aa13□□□□□ -0.33
NPAS3-209ENST00000551008 SCARF2Q96GP6 870 aaPredicted RBP13□□□□□ -0.33
NPAS3-209ENST00000551008 DEPDC7Q96QD5 511 aa13□□□□□ -0.33
NPAS3-209ENST00000551008 LYSMD1Q96S90 227 aa13□□□□□ -0.33
NPAS3-209ENST00000551008 CCDC3Q9BQI4 270 aa13□□□□□ -0.33
NPAS3-209ENST00000551008 TRIM5Q9C035 493 aa13□□□□□ -0.33
NPAS3-209ENST00000551008 ASCL3Q9NQ33 180 aa13□□□□□ -0.33
NPAS3-209ENST00000551008 NCKIPSDQ9NZQ3 722 aa13□□□□□ -0.33
NPAS3-209ENST00000551008 SAE1Q9UBE0 346 aaPredicted RBP13□□□□□ -0.33
NPAS3-209ENST00000551008 GULP1Q9UBP9 304 aa13□□□□□ -0.33
NPAS3-209ENST00000551008 GPR34Q9UPC5 381 aa13□□□□□ -0.33
NPAS3-209ENST00000551008 REXO2Q9Y3B8 237 aaKnown RBP13□□□□□ -0.33
NPAS3-209ENST00000551008 TTLL3Q9Y4R7 772 aa13□□□□□ -0.33
NPAS3-209ENST00000551008 HEY1Q9Y5J3 304 aa13□□□□□ -0.33
NPAS3-209ENST00000551008 SMG1Q96Q15 3661 aaKnown RBP13□□□□□ -0.33
NPAS3-209ENST00000551008 ZNF106Q9H2Y7 1883 aaKnown RBP12.99□□□□□ -0.33
NPAS3-209ENST00000551008 USP12O75317 370 aa12.99□□□□□ -0.33
NPAS3-209ENST00000551008 DXOO77932 396 aaKnown RBP12.99□□□□□ -0.33
NPAS3-209ENST00000551008 KRT10P13645 584 aa12.99□□□□□ -0.33
NPAS3-209ENST00000551008 CTSEP14091 401 aa12.99□□□□□ -0.33
NPAS3-209ENST00000551008 EIF2S3P41091 472 aaKnown RBP12.99□□□□□ -0.33
NPAS3-209ENST00000551008 CD86P42081 329 aa12.99□□□□□ -0.33
NPAS3-209ENST00000551008 ZNF75DP51815 510 aa12.99□□□□□ -0.33
NPAS3-209ENST00000551008 PRKD1Q15139 912 aaPredicted RBP12.99□□□□□ -0.33
NPAS3-209ENST00000551008 LLGL1Q15334 1064 aa12.99□□□□□ -0.33
NPAS3-209ENST00000551008 TSR1Q2NL82 804 aaKnown RBP12.99□□□□□ -0.33
NPAS3-209ENST00000551008 TBC1D25Q3MII6 688 aa12.99□□□□□ -0.33
NPAS3-209ENST00000551008 B3GNT8Q7Z7M8 397 aa12.99□□□□□ -0.33
NPAS3-209ENST00000551008 C17orf82Q86X59 251 aaPredicted RBP12.99□□□□□ -0.33
NPAS3-209ENST00000551008 GKN2Q86XP6 184 aa12.99□□□□□ -0.33
NPAS3-209ENST00000551008 SDR16C5Q8N3Y7 309 aa12.99□□□□□ -0.33
NPAS3-209ENST00000551008 CCNYQ8ND76 341 aa12.99□□□□□ -0.33
NPAS3-209ENST00000551008 LPCAT1Q8NF37 534 aa12.99□□□□□ -0.33
NPAS3-209ENST00000551008 GPBAR1Q8TDU6 330 aa12.99□□□□□ -0.33
NPAS3-209ENST00000551008 NAT6Q93015 286 aa12.99□□□□□ -0.33
NPAS3-209ENST00000551008 ATXN7L3BQ96GX2 97 aa12.99□□□□□ -0.33
NPAS3-209ENST00000551008 HIC2Q96JB3 615 aa12.99□□□□□ -0.33
NPAS3-209ENST00000551008 PHF12Q96QT6 1004 aa12.99□□□□□ -0.33
NPAS3-209ENST00000551008 HERPUD2Q9BSE4 406 aa12.99□□□□□ -0.33
NPAS3-209ENST00000551008 PCDH9Q9HC56 1237 aa12.99□□□□□ -0.33
NPAS3-209ENST00000551008 SPATS2LQ9NUQ6 558 aaKnown RBP12.99□□□□□ -0.33
NPAS3-209ENST00000551008 CNOT6Q9ULM6 557 aaKnown RBP12.99□□□□□ -0.33
NPAS3-209ENST00000551008 SLC17A4Q9Y2C5 497 aa12.99□□□□□ -0.33
NPAS3-209ENST00000551008 PLEKHM1Q9Y4G2 1056 aa12.99□□□□□ -0.33
NPAS3-209ENST00000551008 ALG6Q9Y672 507 aa12.99□□□□□ -0.33
NPAS3-209ENST00000551008 AK5Q9Y6K8 562 aa12.99□□□□□ -0.33
NPAS3-209ENST00000551008 SOWAHDA6NJG2 315 aa12.98□□□□□ -0.33
NPAS3-209ENST00000551008 FADS2P1A8MWK0 482 aa12.98□□□□□ -0.33
NPAS3-209ENST00000551008 APOL1O14791 398 aa12.98□□□□□ -0.33
NPAS3-209ENST00000551008 CLDN7O95471 211 aa12.98□□□□□ -0.33
NPAS3-209ENST00000551008 TNNT1P13805 278 aa12.98□□□□□ -0.33
NPAS3-209ENST00000551008 ZNF30P17039 623 aa12.98□□□□□ -0.33
NPAS3-209ENST00000551008 CES1P23141 567 aa12.98□□□□□ -0.33
NPAS3-209ENST00000551008 KELP23276 732 aa12.98□□□□□ -0.33
NPAS3-209ENST00000551008 AK4P27144 223 aaPredicted RBP12.98□□□□□ -0.33
NPAS3-209ENST00000551008 SLC1A1P43005 524 aa12.98□□□□□ -0.33
NPAS3-209ENST00000551008 MAGEA1P43355 309 aa12.98□□□□□ -0.33
NPAS3-209ENST00000551008 RPIAP49247 311 aa12.98□□□□□ -0.33
NPAS3-209ENST00000551008 RPL26P61254 145 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms