RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 VPS26BQ4G0F5 336 aa15□□□□□ -0.01
CUX1-214ENST00000550008 TXNDC8Q6A555 127 aa15□□□□□ -0.01
CUX1-214ENST00000550008 ZYG11AQ6WRX3 759 aa15□□□□□ -0.01
CUX1-214ENST00000550008 RDH11Q8TC12 318 aa15□□□□□ -0.01
CUX1-214ENST00000550008 PANX3Q96QZ0 392 aa15□□□□□ -0.01
CUX1-214ENST00000550008 ZFYVE1Q9HBF4 777 aa15□□□□□ -0.01
CUX1-214ENST00000550008 FETUBQ9UGM5 382 aa15□□□□□ -0.01
CUX1-214ENST00000550008 RFPL1O75677 317 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 POU1F1P28069 291 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 DYNC1I2Q13409 638 aaKnown RBP14.99□□□□□ -0.01
CUX1-214ENST00000550008 UPP1Q16831 310 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 FNDC3BQ53EP0 1204 aaKnown RBP14.99□□□□□ -0.01
CUX1-214ENST00000550008 TRNP1Q6NT89 227 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 MYOCQ99972 504 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 ACAT2Q9BWD1 397 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 CDH22Q9UJ99 828 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 ULK1O75385 1050 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 SLC25A14O95258 325 aaPredicted RBP14.99□□□□□ -0.01
CUX1-214ENST00000550008 PFKMP08237 780 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 SQLEQ14534 574 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 PAFAH1B3Q15102 231 aaKnown RBP14.99□□□□□ -0.01
CUX1-214ENST00000550008 RIN3Q8TB24 985 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 ING5Q8WYH8 240 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 MYO19Q96H55 970 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 HIC2Q96JB3 615 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 DACH2Q96NX9 599 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 FCRL3Q96P31 734 aaPredicted RBP14.99□□□□□ -0.01
CUX1-214ENST00000550008 TMLHEQ9NVH6 421 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 DDX18Q9NVP1 670 aaKnown RBP14.99□□□□□ -0.01
CUX1-214ENST00000550008 A0A1B0GVM2 712 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 TCAF2A6NFQ2 919 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 CLOCKO15516 846 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 ANXA5P08758 320 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 PRKCHP24723 683 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 SLC11A1P49279 550 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 OCA2Q04671 838 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 SETMARQ53H47 684 aaPredicted RBP14.99□□□□□ -0.01
CUX1-214ENST00000550008 CAMK1DQ8IU85 385 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 RAB42Q8N4Z0 105 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 UCMAQ8WVF2 138 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 PPM1MQ96MI6 270 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 CERS4Q9HA82 394 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 SPAG4Q9NPE6 437 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 ENPP3O14638 875 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 LDLRP01130 860 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 CYP2A7P20853 494 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 ATP6V1E1P36543 226 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 HNF4AP41235 474 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 GCNT7Q6ZNI0 430 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 SERINC5Q86VE9 423 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 PHTF2Q8N3S3 785 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 TTC9BQ8N6N2 239 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 GPR156Q8NFN8 814 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 MAGEE2Q8TD90 523 aaPredicted RBP14.99□□□□□ -0.01
CUX1-214ENST00000550008 PRR11Q96HE9 360 aaPredicted RBP14.99□□□□□ -0.01
CUX1-214ENST00000550008 COPS8Q99627 209 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 GPR62Q9BZJ7 368 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 GRIP2Q9C0E4 1043 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 SNX8Q9Y5X2 465 aa14.99□□□□□ -0.01
CUX1-214ENST00000550008 A0A0J9YYE9 177 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 INSIG1O15503 277 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 NRP2O60462 931 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 FAM58BPP0C7Q3 252 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 S100A3P33764 101 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 SLC18A2Q05940 514 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 GALNT2Q10471 571 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 IRGCQ6NXR0 463 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 ZBTB46Q86UZ6 589 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 ZC3HC1Q86WB0 502 aaKnown RBP14.98□□□□□ -0.01
CUX1-214ENST00000550008 IFNLR1Q8IU57 520 aaPredicted RBP14.98□□□□□ -0.01
CUX1-214ENST00000550008 PHACTR4Q8IZ21 702 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 C3orf58Q8NDZ4 430 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 FUBP3Q96I24 572 aaKnown RBP eCLIP14.98□□□□□ -0.01
CUX1-214ENST00000550008 CLCA2Q9UQC9 943 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 TLR6Q9Y2C9 796 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 PAPPAQ13219 1627 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 IL1BP01584 269 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 ADH1AP07327 375 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 GPC1P35052 558 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 DAB2P98082 770 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 ACSM2AQ08AH3 577 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 ACSM2BQ68CK6 577 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 SAPCD2Q86UD0 394 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 LRRTM3Q86VH5 581 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 C19orf60Q96EN9 201 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 DCUN1D5Q9BTE7 237 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 RMND5AQ9H871 391 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 MGEA5O60502 916 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 NIPSNAP2O75323 286 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 PRAMEF1O95521 474 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 ALDOAP04075 364 aaKnown RBP14.98□□□□□ -0.01
CUX1-214ENST00000550008 ATP5BP06576 529 aaKnown RBP14.98□□□□□ -0.01
CUX1-214ENST00000550008 CNPP09543 421 aaKnown RBP14.98□□□□□ -0.01
CUX1-214ENST00000550008 UGT1A6P19224 532 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 UGT1A1P22309 533 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 UGT1A4P22310 534 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 ITPKAP23677 461 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 PAX3P23760 479 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 IFNA8P32881 189 aa14.98□□□□□ -0.01
CUX1-214ENST00000550008 UGT1A3P35503 534 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms