RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 CABIN1Q9Y6J0 2220 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.89□□□□□ -0.51
PFDN5-208ENST00000549995 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.89□□□□□ -0.51
PFDN5-208ENST00000549995 GOLGA6CA6NDK9 693 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 GOLGA6BA6NDN3 693 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 C4orf47A7E2U8 309 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 PSMD3O43242 534 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 CLDN7O95471 211 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 GOLGA6DP0CG33 693 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 NME1P15531 152 aaKnown RBP11.89□□□□□ -0.51
PFDN5-208ENST00000549995 CSRP1P21291 193 aaKnown RBP11.89□□□□□ -0.51
PFDN5-208ENST00000549995 PSMA3P25788 255 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 HMGCLP35914 325 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 ETV3P41162 512 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 SPINT3P49223 89 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 FNTAP49354 379 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 GNG11P61952 73 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 PRPSAP1Q14558 356 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 NFATC4Q14934 902 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 PCSK7Q16549 785 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 PDPK2PQ6A1A2 396 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 TTC27Q6P3X3 843 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 ADAMTSL4Q6UY14 1074 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 Q6ZSR6 202 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 ARHGEF18Q6ZSZ5 1173 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 LYSMD3Q7Z3D4 306 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 PARGQ86W56 976 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 CREG2Q8IUH2 290 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 PELI3Q8N2H9 469 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.89□□□□□ -0.51
PFDN5-208ENST00000549995 GLIS1Q8NBF1 620 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 PLA2G15Q8NCC3 412 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 IPMKQ8NFU5 416 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 SAP25Q8TEE9 199 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 SLCO2A1Q92959 643 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 RMDN1Q96DB5 314 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 COX14Q96I36 57 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 MS4A14Q96JA4 679 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 MYOCQ99972 504 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 ABCG8Q9H221 673 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 LRRC40Q9H9A6 602 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 IL21RQ9HBE5 538 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 ZFYVE1Q9HBF4 777 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 EIF2B3Q9NR50 452 aaKnown RBP11.89□□□□□ -0.51
PFDN5-208ENST00000549995 GOLGA6AQ9NYA3 693 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 UBP1Q9NZI7 540 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.89□□□□□ -0.51
PFDN5-208ENST00000549995 PAK5Q9P286 719 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 ZNF148Q9UQR1 794 aa11.89□□□□□ -0.51
PFDN5-208ENST00000549995 FNDC3AQ9Y2H6 1198 aaKnown RBP11.89□□□□□ -0.51
PFDN5-208ENST00000549995 ARID1BQ8NFD5 2236 aaPredicted RBP11.88□□□□□ -0.51
PFDN5-208ENST00000549995 C1orf232A0A0U1RR37 186 aa11.88□□□□□ -0.51
PFDN5-208ENST00000549995 TNFRSF10CO14798 259 aa11.88□□□□□ -0.51
PFDN5-208ENST00000549995 CBFA2T3O75081 653 aa11.88□□□□□ -0.51
PFDN5-208ENST00000549995 PHF2O75151 1096 aa11.88□□□□□ -0.51
PFDN5-208ENST00000549995 CSF2P04141 144 aa11.88□□□□□ -0.51
PFDN5-208ENST00000549995 MAGEA6P43360 314 aa11.88□□□□□ -0.51
PFDN5-208ENST00000549995 CHRNA4P43681 627 aa11.88□□□□□ -0.51
PFDN5-208ENST00000549995 ETF1P62495 437 aaKnown RBP11.88□□□□□ -0.51
PFDN5-208ENST00000549995 PTK2BQ14289 1009 aa11.88□□□□□ -0.51
PFDN5-208ENST00000549995 INPP5AQ14642 412 aa11.88□□□□□ -0.51
PFDN5-208ENST00000549995 ACOX1Q15067 660 aa11.88□□□□□ -0.51
PFDN5-208ENST00000549995 RSPO4Q2I0M5 234 aaPredicted RBP11.88□□□□□ -0.51
PFDN5-208ENST00000549995 CCDC70Q6NSX1 233 aa11.88□□□□□ -0.51
PFDN5-208ENST00000549995 PNCKQ6P2M8 343 aa11.88□□□□□ -0.51
PFDN5-208ENST00000549995 Q6ZVL8 140 aa11.88□□□□□ -0.51
PFDN5-208ENST00000549995 PTAR1Q7Z6K3 402 aaPredicted RBP11.88□□□□□ -0.51
PFDN5-208ENST00000549995 PAF1Q8N7H5 531 aa11.88□□□□□ -0.51
PFDN5-208ENST00000549995 ATL2Q8NHH9 583 aa11.88□□□□□ -0.51
PFDN5-208ENST00000549995 FUBP1Q96AE4 644 aaKnown RBP11.88□□□□□ -0.51
PFDN5-208ENST00000549995 SCARF2Q96GP6 870 aaPredicted RBP11.88□□□□□ -0.51
PFDN5-208ENST00000549995 PLEKHG4BQ96PX9 1271 aa11.88□□□□□ -0.51
PFDN5-208ENST00000549995 APOOQ9BUR5 198 aa11.88□□□□□ -0.51
PFDN5-208ENST00000549995 FICDQ9BVA6 458 aa11.88□□□□□ -0.51
PFDN5-208ENST00000549995 FSD1LQ9BXM9 530 aa11.88□□□□□ -0.51
PFDN5-208ENST00000549995 RAD18Q9NS91 495 aa11.88□□□□□ -0.51
PFDN5-208ENST00000549995 TM7SF3Q9NS93 570 aa11.88□□□□□ -0.51
PFDN5-208ENST00000549995 PKD2L2Q9NZM6 624 aa11.88□□□□□ -0.51
PFDN5-208ENST00000549995 IL17CQ9P0M4 197 aa11.88□□□□□ -0.51
PFDN5-208ENST00000549995 RNF14Q9UBS8 474 aa11.88□□□□□ -0.51
PFDN5-208ENST00000549995 CDV3Q9UKY7 258 aaKnown RBP11.88□□□□□ -0.51
PFDN5-208ENST00000549995 PNMA8BQ9ULN7 279 aaPredicted RBP11.88□□□□□ -0.51
PFDN5-208ENST00000549995 SAR1BQ9Y6B6 198 aa11.88□□□□□ -0.51
PFDN5-208ENST00000549995 ZFC3H1O60293 1989 aaKnown RBP11.87□□□□□ -0.51
PFDN5-208ENST00000549995 A0A0U1RQS6 177 aa11.87□□□□□ -0.51
PFDN5-208ENST00000549995 CTAGE9A4FU28 777 aa11.87□□□□□ -0.51
PFDN5-208ENST00000549995 A8MX80 341 aa11.87□□□□□ -0.51
PFDN5-208ENST00000549995 K7ESM1 405 aa11.87□□□□□ -0.51
PFDN5-208ENST00000549995 ZNF185O15231 689 aa11.87□□□□□ -0.51
PFDN5-208ENST00000549995 FLRT2O43155 660 aa11.87□□□□□ -0.51
PFDN5-208ENST00000549995 PPFIA2O75334 1257 aa11.87□□□□□ -0.51
PFDN5-208ENST00000549995 AGTP01019 485 aa11.87□□□□□ -0.51
PFDN5-208ENST00000549995 GIMD1P0DJR0 217 aa11.87□□□□□ -0.51
PFDN5-208ENST00000549995 MYCLP1P12525 358 aaPredicted RBP11.87□□□□□ -0.51
PFDN5-208ENST00000549995 RPL22P35268 128 aaKnown RBP11.87□□□□□ -0.51
PFDN5-208ENST00000549995 COILP38432 576 aaPredicted RBP11.87□□□□□ -0.51
PFDN5-208ENST00000549995 ARRB1P49407 418 aaPredicted RBP11.87□□□□□ -0.51
PFDN5-208ENST00000549995 ATXN3P54252 364 aaPredicted RBP11.87□□□□□ -0.51
PFDN5-208ENST00000549995 EIF2B5Q13144 721 aaKnown RBP11.87□□□□□ -0.51
PFDN5-208ENST00000549995 PDE1CQ14123 709 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms