RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 CDKL2Q92772 493 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 VOPP1Q96AW1 172 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 ULK4Q96C45 1275 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 NUS1Q96E22 293 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 DTD2Q96FN9 168 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 PKNOX2Q96KN3 472 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 NSMCE3Q96MG7 304 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 EBNA1BP2Q99848 306 aaKnown RBP9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 TPSD1Q9BZJ3 242 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 ZCCHC2Q9C0B9 1178 aaKnown RBP9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 DUSP15Q9H1R2 295 aaPredicted RBP9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 ZDHHC18Q9NUE0 388 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 NLE1Q9NVX2 485 aaPredicted RBP9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 ARGLU1Q9NWB6 273 aaPredicted RBP9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 NSMCE4AQ9NXX6 385 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 IL17CQ9P0M4 197 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 SUSD2Q9UGT4 822 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 RAB23Q9ULC3 237 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 VPS9D1Q9Y2B5 631 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 SLC30A1Q9Y6M5 507 aa9.76□□□□□ -0.85
SMARCD1-206ENST00000549274 EML5Q05BV3 1969 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 SCN8AQ9UQD0 1980 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 LRRK1Q38SD2 2015 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 PLXNA2O75051 1894 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 A0A1W2PQU0 124 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 ESYT3A0FGR9 886 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 ANTXRLA6NF34 631 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 MEI4A8MW99 385 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 PRR5-ARHGAP8B1AHC4 643 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 PRAMEF26H0Y7S4 382 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 LATO43561 262 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 CLDN7O95471 211 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 TDGF1P13385 188 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 ITGALP20701 1170 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 KELP23276 732 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 STX2P32856 288 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 HOXD12P35452 270 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 CARSP49589 748 aaKnown RBP9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 ZNF140P52738 457 aaPredicted RBP9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 TERF1P54274 439 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 TAS2R38P59533 333 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 MRPS25P82663 173 aaKnown RBP9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 RPL6Q02878 288 aaKnown RBP9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 ACVR1Q04771 509 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 DHX9Q08211 1270 aaKnown RBP9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 OVGP1Q12889 678 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 RALGDSQ12967 914 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 NAB1Q13506 487 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 IHHQ14623 411 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 LRRC14Q15048 493 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 BRD3Q15059 726 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 LONRF1Q17RB8 773 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 ERCC6LQ2NKX8 1250 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 GPR33Q49SQ1 333 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 TMEM259Q4ZIN3 620 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 CERCAMQ5T4B2 595 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 KIAA0930Q6ICG6 404 aaPredicted RBP9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 MRNIPQ6NTE8 343 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 ZDHHC24Q6UX98 284 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 CERS6Q6ZMG9 384 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 CYS1Q717R9 158 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 CEP68Q76N32 757 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 TMEM135Q86UB9 458 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 FAM124AQ86V42 546 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 CCDC25Q86WR0 208 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 DCP2Q8IU60 420 aaKnown RBP9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 ZBED8Q8IZ13 594 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 TTC30BQ8N4P2 665 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 TRAM1L1Q8N609 369 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 EFCAB3Q8N7B9 438 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 NELL1Q92832 810 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 SIGLEC10Q96LC7 697 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 COQ10AQ96MF6 247 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 WRAP53Q9BUR4 548 aaKnown RBP9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 GPR174Q9BXC1 333 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 C1QTNF2Q9BXJ5 285 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 SLC17A9Q9BYT1 436 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 SLC6A17Q9H1V8 727 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 SEMA4AQ9H3S1 761 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 FAM83DQ9H4H8 585 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 ANKZF1Q9H8Y5 726 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 SAYSD1Q9NPB0 183 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 SYBUQ9NX95 663 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 SERGEFQ9UGK8 458 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 ZC3H7BQ9UGR2 993 aaKnown RBP9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 RAB21Q9UL25 225 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 NFU1Q9UMS0 254 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 TEX264Q9Y6I9 313 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 THADAQ6YHU6 1953 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 FANCMQ8IYD8 2048 aa9.75□□□□□ -0.85
SMARCD1-206ENST00000549274 NUMA1Q14980 2115 aa9.74□□□□□ -0.85
SMARCD1-206ENST00000549274 ZNF318Q5VUA4 2279 aa9.74□□□□□ -0.85
SMARCD1-206ENST00000549274 GLYATL1P3A0A0U1RQE8 302 aa9.74□□□□□ -0.85
SMARCD1-206ENST00000549274 CCDC151A5D8V7 595 aa9.74□□□□□ -0.85
SMARCD1-206ENST00000549274 FAM47DPA6NHR8 397 aa9.74□□□□□ -0.85
SMARCD1-206ENST00000549274 GOLGA8CPA6NN73 597 aa9.74□□□□□ -0.85
SMARCD1-206ENST00000549274 METTL12A8MUP2 240 aa9.74□□□□□ -0.85
SMARCD1-206ENST00000549274 QSOX1O00391 747 aa9.74□□□□□ -0.85
SMARCD1-206ENST00000549274 FPGTO14772 594 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms