RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 ZNF177Q13360 481 aaPredicted RBP14.17□□□□□ -0.14
CACNB3-209ENST00000548860 BFSP2Q13515 415 aa14.17□□□□□ -0.14
CACNB3-209ENST00000548860 MAPK11Q15759 364 aa14.17□□□□□ -0.14
CACNB3-209ENST00000548860 TAF2Q6P1X5 1199 aa14.17□□□□□ -0.14
CACNB3-209ENST00000548860 POTEHQ6S545 545 aa14.17□□□□□ -0.14
CACNB3-209ENST00000548860 B3GNT6Q6ZMB0 384 aa14.17□□□□□ -0.14
CACNB3-209ENST00000548860 CACUL1Q86Y37 369 aa14.17□□□□□ -0.14
CACNB3-209ENST00000548860 CPNE9Q8IYJ1 553 aa14.17□□□□□ -0.14
CACNB3-209ENST00000548860 SIKE1Q9BRV8 207 aa14.17□□□□□ -0.14
CACNB3-209ENST00000548860 OLA1Q9NTK5 396 aaKnown RBP14.17□□□□□ -0.14
CACNB3-209ENST00000548860 TAS2R13Q9NYV9 303 aa14.17□□□□□ -0.14
CACNB3-209ENST00000548860 C6orf203Q9P0P8 240 aaPredicted RBP14.17□□□□□ -0.14
CACNB3-209ENST00000548860 HCSTQ9UBK5 93 aa14.17□□□□□ -0.14
CACNB3-209ENST00000548860 EIF2B4Q9UI10 523 aaKnown RBP14.17□□□□□ -0.14
CACNB3-209ENST00000548860 C2orf81A6NN90 581 aa14.17□□□□□ -0.14
CACNB3-209ENST00000548860 IRAK2O43187 625 aa14.17□□□□□ -0.14
CACNB3-209ENST00000548860 ASGR1P07306 291 aa14.17□□□□□ -0.14
CACNB3-209ENST00000548860 TFPTP0C1Z6 253 aa14.17□□□□□ -0.14
CACNB3-209ENST00000548860 AKT1P31749 480 aa14.17□□□□□ -0.14
CACNB3-209ENST00000548860 CASP9P55211 416 aa14.17□□□□□ -0.14
CACNB3-209ENST00000548860 TRIM25Q14258 630 aaKnown RBP14.17□□□□□ -0.14
CACNB3-209ENST00000548860 LAPTM4AQ15012 233 aa14.17□□□□□ -0.14
CACNB3-209ENST00000548860 CPSF6Q16630 551 aaKnown RBP eCLIP14.17□□□□□ -0.14
CACNB3-209ENST00000548860 FAM151BQ6UXP7 276 aa14.17□□□□□ -0.14
CACNB3-209ENST00000548860 TIFABQ6ZNK6 161 aa14.17□□□□□ -0.14
CACNB3-209ENST00000548860 TMEM86AQ8N2M4 240 aa14.17□□□□□ -0.14
CACNB3-209ENST00000548860 GATA6Q92908 595 aa14.17□□□□□ -0.14
CACNB3-209ENST00000548860 COL2A1P02458 1487 aaPredicted RBP14.17□□□□□ -0.14
CACNB3-209ENST00000548860 SDHDO14521 159 aa14.17□□□□□ -0.14
CACNB3-209ENST00000548860 PRRG1O14668 218 aa14.17□□□□□ -0.14
CACNB3-209ENST00000548860 CLASP2O75122 1294 aaKnown RBP14.17□□□□□ -0.14
CACNB3-209ENST00000548860 OR4F21O95013 312 aa14.17□□□□□ -0.14
CACNB3-209ENST00000548860 AKR1A1P14550 325 aa14.17□□□□□ -0.14
CACNB3-209ENST00000548860 GDF5P43026 501 aa14.17□□□□□ -0.14
CACNB3-209ENST00000548860 MSLNQ13421 630 aaPredicted RBP14.17□□□□□ -0.14
CACNB3-209ENST00000548860 NAB1Q13506 487 aa14.17□□□□□ -0.14
CACNB3-209ENST00000548860 CLDN19Q8N6F1 224 aa14.17□□□□□ -0.14
CACNB3-209ENST00000548860 SIDT2Q8NBJ9 832 aaKnown RBP14.17□□□□□ -0.14
CACNB3-209ENST00000548860 RTP4Q96DX8 246 aa14.17□□□□□ -0.14
CACNB3-209ENST00000548860 SLC29A1Q99808 456 aa14.17□□□□□ -0.14
CACNB3-209ENST00000548860 POLR1EQ9GZS1 481 aaKnown RBP14.17□□□□□ -0.14
CACNB3-209ENST00000548860 FAM192AQ9GZU8 254 aa14.17□□□□□ -0.14
CACNB3-209ENST00000548860 ETAA1Q9NY74 926 aa14.17□□□□□ -0.14
CACNB3-209ENST00000548860 PKD2L2Q9NZM6 624 aa14.17□□□□□ -0.14
CACNB3-209ENST00000548860 RCOR3Q9P2K3 495 aaPredicted RBP14.17□□□□□ -0.14
CACNB3-209ENST00000548860 LINC00854A0A1B0GVQ3 168 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 SYNDIG1LA6NDD5 238 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 PRORSD1PA6NEY8 169 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 UPK3BL1B0FP48 263 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 UPK3BL2E5RIL1 263 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 AP3B1O00203 1094 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 VPS26AO75436 327 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 PPM1FP49593 454 aaPredicted RBP14.16□□□□□ -0.14
CACNB3-209ENST00000548860 FLT3LGP49771 235 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 FOXA1P55317 472 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 SULT2A1Q06520 285 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 TSTD2Q5T7W7 516 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 GRAMD4Q6IC98 578 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 KLHDC10Q6PID8 442 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 LINGO1Q96FE5 620 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 FBXL20Q96IG2 436 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 SYT17Q9BSW7 474 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 VPS45Q9NRW7 570 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 GALNT8Q9NY28 637 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 DNAJB4Q9UDY4 337 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 VPS4AQ9UN37 437 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 LBPP18428 481 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 MAGP20916 626 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 GLDCP23378 1020 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 ALDH4A1P30038 563 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 CDKN1CP49918 316 aaPredicted RBP14.16□□□□□ -0.14
CACNB3-209ENST00000548860 CDKN2DP55273 166 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 GALNT2Q10471 571 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 LAPTM5Q13571 262 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 UBXN11Q5T124 520 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 FBXL22Q6P050 247 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 PRSS55Q6UWB4 352 aaPredicted RBP14.16□□□□□ -0.14
CACNB3-209ENST00000548860 GCNT7Q6ZNI0 430 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 BPIFB6Q8NFQ5 453 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 FAM110BQ8TC76 370 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 PNPT1Q8TCS8 783 aaKnown RBP14.16□□□□□ -0.14
CACNB3-209ENST00000548860 RUBCNLQ9H714 662 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 ZBTB26Q9HCK0 441 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 CRLS1Q9UJA2 301 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 DERAQ9Y315 318 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 PCDHB5Q9Y5E4 795 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 TOMM70O94826 608 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 GKP32189 559 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 ZFP1Q6P2D0 407 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 RNF111Q6ZNA4 994 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 SLC44A2Q8IWA5 706 aaPredicted RBP14.16□□□□□ -0.14
CACNB3-209ENST00000548860 OR4L1Q8NH43 312 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.16□□□□□ -0.14
CACNB3-209ENST00000548860 DGCR14Q96DF8 476 aaKnown RBP14.16□□□□□ -0.14
CACNB3-209ENST00000548860 PRPF19Q9UMS4 504 aaKnown RBP14.16□□□□□ -0.14
CACNB3-209ENST00000548860 OAZ3Q9UMX2 235 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 DGKBQ9Y6T7 804 aa14.16□□□□□ -0.14
CACNB3-209ENST00000548860 CROCCQ5TZA2 2017 aa14.15□□□□□ -0.14
CACNB3-209ENST00000548860 ABCB1P08183 1280 aaPredicted RBP14.15□□□□□ -0.14
CACNB3-209ENST00000548860 ADARP55265 1226 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms