RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 HOXB8P17481 243 aaPredicted RBP9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 TSPAN8P19075 237 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 RPL10P27635 214 aaKnown RBP9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 CCR1P32246 355 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 GRIK2Q13002 908 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 PCSK7Q16549 785 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 EML3Q32P44 896 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 TWF2Q6IBS0 349 aaKnown RBP9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 MOB2Q70IA6 237 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 KDELC2Q7Z4H8 507 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 RAB44Q7Z6P3 723 aaPredicted RBP9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 PTRH1Q86Y79 214 aaKnown RBP9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 PAPD5Q8NDF8 572 aaKnown RBP9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 TWIST2Q8WVJ9 160 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 FATE1Q969F0 183 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 PTERQ96BW5 349 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 IMP4Q96G21 291 aaKnown RBP9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 CNDP2Q96KP4 475 aaKnown RBP9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 SPON1Q9HCB6 807 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 NDFIP2Q9NV92 336 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 POLR3BQ9NW08 1133 aaPredicted RBP9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 EGFL7Q9UHF1 273 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 SFMBT1Q9UHJ3 866 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 OAZ3Q9UMX2 235 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 PCDHA9Q9Y5H5 950 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 TIMM13Q9Y5L4 95 aaPredicted RBP9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 BPTFQ12830 3046 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 NYNRINQ9P2P1 1898 aaKnown RBP9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 FAM149AA5PLN7 773 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 MROH6A6NGR9 719 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 WASH4PA8MWX3 477 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 H3BMQ9 156 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 PIP5K1BO14986 540 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 ARPC2O15144 300 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 CLOCKO15516 846 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 VPS4BO75351 444 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 IDO1P14902 403 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 LBPP18428 481 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 UGT1A6P19224 532 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 FDXRP22570 491 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 RFC2P35250 354 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 CAPGP40121 348 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 MRPL19P49406 292 aaKnown RBP9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 NRG1Q02297 640 aaPredicted RBP9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 C16orf72Q14CZ0 275 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 ZNF829Q3KNS6 432 aaPredicted RBP9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 NOMO2Q5JPE7 1267 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 FAM171BQ6P995 826 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 BLOC1S3Q6QNY0 202 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 TRIM74Q86UV6 250 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 TRIM73Q86UV7 250 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 DCP1BQ8IZD4 617 aaKnown RBP9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 DHRSXQ8N5I4 330 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 PTGR2Q8N8N7 351 aaPredicted RBP9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 RHEBL1Q8TAI7 183 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 PNPT1Q8TCS8 783 aaKnown RBP9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 BORCS5Q969J3 196 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 HDAC10Q969S8 669 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 FCRL2Q96LA5 508 aaPredicted RBP9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 COG8Q96MW5 612 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 TUBA1CQ9BQE3 449 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 MUC3BQ9H195 1237 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 RPF2Q9H7B2 306 aaKnown RBP9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 IL1RL2Q9HB29 575 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 POPDC3Q9HBV1 291 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 MID1IP1Q9NPA3 183 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 SLC52A3Q9NQ40 469 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 RGS18Q9NS28 235 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 ABCC13Q9NSE7 274 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 SMPD3Q9NY59 655 aaPredicted RBP9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 TMEM9Q9P0T7 183 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 CDC14AQ9UNH5 594 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 FADS3Q9Y5Q0 445 aa9.87□□□□□ -0.83
SMARCD1-205ENST00000548573 TCRBV5S2A0A599 114 aa9.86□□□□□ -0.83
SMARCD1-205ENST00000548573 TYW5A2RUC4 315 aaKnown RBP9.86□□□□□ -0.83
SMARCD1-205ENST00000548573 GIPC1O14908 333 aa9.86□□□□□ -0.83
SMARCD1-205ENST00000548573 CBFA2T3O75081 653 aa9.86□□□□□ -0.83
SMARCD1-205ENST00000548573 ATE1O95260 518 aa9.86□□□□□ -0.83
SMARCD1-205ENST00000548573 PEX11BO96011 259 aa9.86□□□□□ -0.83
SMARCD1-205ENST00000548573 OXTRP30559 389 aa9.86□□□□□ -0.83
SMARCD1-205ENST00000548573 RENBPP51606 427 aa9.86□□□□□ -0.83
SMARCD1-205ENST00000548573 SUOXP51687 545 aa9.86□□□□□ -0.83
SMARCD1-205ENST00000548573 CLCNKBP51801 687 aa9.86□□□□□ -0.83
SMARCD1-205ENST00000548573 CDH13P55290 713 aa9.86□□□□□ -0.83
SMARCD1-205ENST00000548573 GRSF1Q12849 480 aaKnown RBP eCLIP9.86□□□□□ -0.83
SMARCD1-205ENST00000548573 PMS2P3Q13401 168 aa9.86□□□□□ -0.83
SMARCD1-205ENST00000548573 CAPRIN1Q14444 709 aaKnown RBP9.86□□□□□ -0.83
SMARCD1-205ENST00000548573 GRB7Q14451 532 aa9.86□□□□□ -0.83
SMARCD1-205ENST00000548573 MFSD10Q14728 455 aa9.86□□□□□ -0.83
SMARCD1-205ENST00000548573 RAB39AQ14964 217 aa9.86□□□□□ -0.83
SMARCD1-205ENST00000548573 FSCN1Q16658 493 aaKnown RBP9.86□□□□□ -0.83
SMARCD1-205ENST00000548573 USP51Q70EK9 711 aa9.86□□□□□ -0.83
SMARCD1-205ENST00000548573 DPP9Q86TI2 863 aa9.86□□□□□ -0.83
SMARCD1-205ENST00000548573 SPNS2Q8IVW8 549 aa9.86□□□□□ -0.83
SMARCD1-205ENST00000548573 TBC1D21Q8IYX1 336 aa9.86□□□□□ -0.83
SMARCD1-205ENST00000548573 LEMD2Q8NC56 503 aa9.86□□□□□ -0.83
SMARCD1-205ENST00000548573 TMEM125Q96AQ2 219 aa9.86□□□□□ -0.83
SMARCD1-205ENST00000548573 THAP11Q96EK4 314 aa9.86□□□□□ -0.83
SMARCD1-205ENST00000548573 VPS50Q96JG6 964 aa9.86□□□□□ -0.83
SMARCD1-205ENST00000548573 PLEKHG4BQ96PX9 1271 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms