RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 C11orf70Q9BRQ4 267 aa12.82□□□□□ -0.36
USP28-212ENST00000544750 STK33Q9BYT3 514 aa12.82□□□□□ -0.36
USP28-212ENST00000544750 ATP13A3Q9H7F0 1226 aa12.82□□□□□ -0.36
USP28-212ENST00000544750 FZD10Q9ULW2 581 aa12.82□□□□□ -0.36
USP28-212ENST00000544750 TMEM184BQ9Y519 407 aaPredicted RBP12.82□□□□□ -0.36
USP28-212ENST00000544750 MED13Q9UHV7 2174 aa12.81□□□□□ -0.36
USP28-212ENST00000544750 HIVEP3Q5T1R4 2406 aa12.81□□□□□ -0.36
USP28-212ENST00000544750 PRR19A6NJB7 356 aa12.81□□□□□ -0.36
USP28-212ENST00000544750 EFCAB7A8K855 629 aa12.81□□□□□ -0.36
USP28-212ENST00000544750 TEX33O43247 280 aa12.81□□□□□ -0.36
USP28-212ENST00000544750 MTSS1O43312 755 aa12.81□□□□□ -0.36
USP28-212ENST00000544750 UNGP13051 313 aaPredicted RBP12.81□□□□□ -0.36
USP28-212ENST00000544750 MAP4P27816 1152 aaKnown RBP12.81□□□□□ -0.36
USP28-212ENST00000544750 SERPINA4P29622 427 aa12.81□□□□□ -0.36
USP28-212ENST00000544750 GPLD1P80108 840 aa12.81□□□□□ -0.36
USP28-212ENST00000544750 CTBSQ01459 385 aa12.81□□□□□ -0.36
USP28-212ENST00000544750 ANO6Q4KMQ2 910 aa12.81□□□□□ -0.36
USP28-212ENST00000544750 LACTB2Q53H82 288 aaPredicted RBP12.81□□□□□ -0.36
USP28-212ENST00000544750 CFAP58Q5T655 872 aa12.81□□□□□ -0.36
USP28-212ENST00000544750 HIST2H2BCQ6DN03 193 aa12.81□□□□□ -0.36
USP28-212ENST00000544750 SLC30A9Q6PML9 568 aa12.81□□□□□ -0.36
USP28-212ENST00000544750 ARHGAP22Q7Z5H3 698 aa12.81□□□□□ -0.36
USP28-212ENST00000544750 HEATR4Q86WZ0 1026 aa12.81□□□□□ -0.36
USP28-212ENST00000544750 NLGN4XQ8N0W4 816 aa12.81□□□□□ -0.36
USP28-212ENST00000544750 AOPEPQ8N6M6 819 aa12.81□□□□□ -0.36
USP28-212ENST00000544750 NLGN4YQ8NFZ3 816 aaPredicted RBP12.81□□□□□ -0.36
USP28-212ENST00000544750 SLC30A5Q8TAD4 765 aa12.81□□□□□ -0.36
USP28-212ENST00000544750 APOBEC4Q8WW27 367 aaKnown RBP12.81□□□□□ -0.36
USP28-212ENST00000544750 SCARF2Q96GP6 870 aaPredicted RBP12.81□□□□□ -0.36
USP28-212ENST00000544750 VPS16Q9H269 839 aa12.81□□□□□ -0.36
USP28-212ENST00000544750 CATSPERBQ9H7T0 1116 aa12.81□□□□□ -0.36
USP28-212ENST00000544750 GPN2Q9H9Y4 310 aaPredicted RBP12.81□□□□□ -0.36
USP28-212ENST00000544750 PHPT1Q9NRX4 125 aaPredicted RBP12.81□□□□□ -0.36
USP28-212ENST00000544750 B4GALT6Q9UBX8 382 aa12.81□□□□□ -0.36
USP28-212ENST00000544750 LIMA1Q9UHB6 759 aaKnown RBP12.81□□□□□ -0.36
USP28-212ENST00000544750 SUFUQ9UMX1 484 aa12.81□□□□□ -0.36
USP28-212ENST00000544750 SLC17A4Q9Y2C5 497 aa12.81□□□□□ -0.36
USP28-212ENST00000544750 TCRBV5S1A1TA0A578 114 aa12.8□□□□□ -0.36
USP28-212ENST00000544750 K7EM74 188 aa12.8□□□□□ -0.36
USP28-212ENST00000544750 FGF10O15520 208 aaPredicted RBP12.8□□□□□ -0.36
USP28-212ENST00000544750 CCP110O43303 1012 aa12.8□□□□□ -0.36
USP28-212ENST00000544750 CREB3O43889 395 aa12.8□□□□□ -0.36
USP28-212ENST00000544750 DLGAP3O95886 979 aa12.8□□□□□ -0.36
USP28-212ENST00000544750 IVLP07476 585 aa12.8□□□□□ -0.36
USP28-212ENST00000544750 PRKAR1AP10644 381 aa12.8□□□□□ -0.36
USP28-212ENST00000544750 KRT3P12035 628 aa12.8□□□□□ -0.36
USP28-212ENST00000544750 GPD1P21695 349 aa12.8□□□□□ -0.36
USP28-212ENST00000544750 TEAD1P28347 426 aa12.8□□□□□ -0.36
USP28-212ENST00000544750 ADCY8P40145 1251 aa12.8□□□□□ -0.36
USP28-212ENST00000544750 GNPDA1P46926 289 aa12.8□□□□□ -0.36
USP28-212ENST00000544750 FASLGP48023 281 aa12.8□□□□□ -0.36
USP28-212ENST00000544750 KLK7P49862 253 aa12.8□□□□□ -0.36
USP28-212ENST00000544750 NDST2P52849 883 aa12.8□□□□□ -0.36
USP28-212ENST00000544750 POLR2LP62875 67 aaKnown RBP12.8□□□□□ -0.36
USP28-212ENST00000544750 CDK3Q00526 305 aa12.8□□□□□ -0.36
USP28-212ENST00000544750 MC2RQ01718 297 aa12.8□□□□□ -0.36
USP28-212ENST00000544750 CDR2Q01850 454 aa12.8□□□□□ -0.36
USP28-212ENST00000544750 NSUN2Q08J23 767 aaKnown RBP eCLIP12.8□□□□□ -0.36
USP28-212ENST00000544750 ABHD18Q0P651 414 aa12.8□□□□□ -0.36
USP28-212ENST00000544750 KLRB1Q12918 225 aa12.8□□□□□ -0.36
USP28-212ENST00000544750 ACOX1Q15067 660 aa12.8□□□□□ -0.36
USP28-212ENST00000544750 CNGA3Q16281 694 aa12.8□□□□□ -0.36
USP28-212ENST00000544750 DEFB109BQ30KR1 87 aa12.8□□□□□ -0.36
USP28-212ENST00000544750 UNC5BQ8IZJ1 945 aa12.8□□□□□ -0.36
USP28-212ENST00000544750 NUS1Q96E22 293 aa12.8□□□□□ -0.36
USP28-212ENST00000544750 BPIFA3Q9BQP9 254 aa12.8□□□□□ -0.36
USP28-212ENST00000544750 EFHD1Q9BUP0 239 aa12.8□□□□□ -0.36
USP28-212ENST00000544750 SLC39A8Q9C0K1 460 aa12.8□□□□□ -0.36
USP28-212ENST00000544750 GANQ9H2C0 597 aa12.8□□□□□ -0.36
USP28-212ENST00000544750 LRRC4CQ9HCJ2 640 aa12.8□□□□□ -0.36
USP28-212ENST00000544750 FBXO8Q9NRD0 319 aa12.8□□□□□ -0.36
USP28-212ENST00000544750 KCNK4Q9NYG8 393 aa12.8□□□□□ -0.36
USP28-212ENST00000544750 PLEKHM1Q9Y4G2 1056 aa12.8□□□□□ -0.36
USP28-212ENST00000544750 TEP1Q99973 2627 aaKnown RBP12.79□□□□□ -0.36
USP28-212ENST00000544750 SIGLEC16A6NMB1 481 aa12.79□□□□□ -0.36
USP28-212ENST00000544750 A8MX80 341 aa12.79□□□□□ -0.36
USP28-212ENST00000544750 PES1O00541 588 aaKnown RBP12.79□□□□□ -0.36
USP28-212ENST00000544750 EPHB6O15197 1021 aa12.79□□□□□ -0.36
USP28-212ENST00000544750 ATP1A3P13637 1013 aa12.79□□□□□ -0.36
USP28-212ENST00000544750 POLD2P49005 469 aa12.79□□□□□ -0.36
USP28-212ENST00000544750 PAPOLAP51003 745 aaKnown RBP12.79□□□□□ -0.36
USP28-212ENST00000544750 COPB1P53618 953 aaKnown RBP12.79□□□□□ -0.36
USP28-212ENST00000544750 AIF1P55008 147 aa12.79□□□□□ -0.36
USP28-212ENST00000544750 BCL2L1Q07817 233 aa12.79□□□□□ -0.36
USP28-212ENST00000544750 ATP1A1-AS1Q5TC04 95 aa12.79□□□□□ -0.36
USP28-212ENST00000544750 FAM129CQ86XR2 697 aa12.79□□□□□ -0.36
USP28-212ENST00000544750 ARHGAP12Q8IWW6 846 aa12.79□□□□□ -0.36
USP28-212ENST00000544750 C3orf20Q8ND61 904 aa12.79□□□□□ -0.36
USP28-212ENST00000544750 STARD8Q92502 1023 aa12.79□□□□□ -0.36
USP28-212ENST00000544750 DTD2Q96FN9 168 aa12.79□□□□□ -0.36
USP28-212ENST00000544750 CELF6Q96J87 481 aaKnown RBP12.79□□□□□ -0.36
USP28-212ENST00000544750 PCDHB18PQ96TA0 734 aa12.79□□□□□ -0.36
USP28-212ENST00000544750 CTRCQ99895 268 aa12.79□□□□□ -0.36
USP28-212ENST00000544750 SUDS3Q9H7L9 328 aaPredicted RBP12.79□□□□□ -0.36
USP28-212ENST00000544750 APMAPQ9HDC9 416 aa12.79□□□□□ -0.36
USP28-212ENST00000544750 KCTD5Q9NXV2 234 aa12.79□□□□□ -0.36
USP28-212ENST00000544750 PLEKHB1Q9UF11 243 aaPredicted RBP12.79□□□□□ -0.36
USP28-212ENST00000544750 TP53TG5Q9Y2B4 290 aa12.79□□□□□ -0.36
USP28-212ENST00000544750 SIK3Q9Y2K2 1263 aa12.79□□□□□ -0.36
USP28-212ENST00000544750 KCNMB2Q9Y691 235 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms