RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 GRM6O15303 877 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 LCA5LO95447 670 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 PTSQ03393 145 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 PRKCZQ05513 592 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 GRM3Q14832 879 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 PPP1R15BQ5SWA1 713 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 PAGE2Q7Z2X7 111 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 ARMC8Q8IUR7 673 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 MTMR14Q8NCE2 650 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 SMG7Q92540 1137 aaKnown RBP12.8□□□□□ -0.36
CHD4-211ENST00000544484 B3GALT6Q96L58 329 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 QKIQ96PU8 341 aaKnown RBP eCLIP12.8□□□□□ -0.36
CHD4-211ENST00000544484 HNRNPABQ99729 332 aaKnown RBP12.8□□□□□ -0.36
CHD4-211ENST00000544484 TTYH3Q9C0H2 523 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 RCOR3Q9P2K3 495 aaPredicted RBP12.8□□□□□ -0.36
CHD4-211ENST00000544484 DEC1Q9P2X7 70 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 AJAP1Q9UKB5 411 aaPredicted RBP12.8□□□□□ -0.36
CHD4-211ENST00000544484 ZW10O43264 779 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 PGM3O95394 542 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 ANPEPP15144 967 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 ATP12AP54707 1039 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 MPPE1Q53F39 396 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 IRGCQ6NXR0 463 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 EIF3MQ7L2H7 374 aaKnown RBP12.8□□□□□ -0.36
CHD4-211ENST00000544484 GSTCDQ8NEC7 633 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 FLCNQ8NFG4 579 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 HMCESQ96FZ2 354 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 GPR21Q99679 349 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 ACBD6Q9BR61 282 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 DAPK2Q9UIK4 370 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 CDK14O94921 469 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 CST1P01037 141 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 DNTTP04053 509 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 USP46P62068 366 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 PDZK1Q5T2W1 519 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.79□□□□□ -0.36
CHD4-211ENST00000544484 ARL14EPQ8N8R7 260 aaPredicted RBP12.79□□□□□ -0.36
CHD4-211ENST00000544484 DBF4BQ8NFT6 615 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 YJEFN3A6XGL0 299 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 C9IYK1 514 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 ALOX12P18054 663 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 PBX3P40426 434 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 GJA9P57773 515 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 ZFRQ96KR1 1074 aaKnown RBP12.79□□□□□ -0.36
CHD4-211ENST00000544484 ANKRD27Q96NW4 1050 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 GBA3Q9H227 469 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 DMAC2Q9NW81 257 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 RPS6KA6Q9UK32 745 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 C2CD4BA6NLJ0 364 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 OR6B1O95007 311 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 C22orf31O95567 290 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 NDST3O95803 873 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 NELFEP18615 380 aaKnown RBP12.79□□□□□ -0.36
CHD4-211ENST00000544484 LSM3P62310 102 aaKnown RBP12.79□□□□□ -0.36
CHD4-211ENST00000544484 TNK2Q07912 1038 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 ZNHIT3Q15649 155 aaPredicted RBP12.79□□□□□ -0.36
CHD4-211ENST00000544484 VWA5B1Q5TIE3 1220 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 ZNF57Q68EA5 555 aaPredicted RBP12.79□□□□□ -0.36
CHD4-211ENST00000544484 AZIN2Q96A70 460 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 HMGXB4Q9UGU5 601 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 ADAM30Q9UKF2 790 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 SLC22A3O75751 556 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 AP2A1O95782 977 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 SMARCB1Q12824 385 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 ESRP1Q6NXG1 681 aaKnown RBP12.79□□□□□ -0.36
CHD4-211ENST00000544484 PSRC1Q6PGN9 363 aaPredicted RBP12.79□□□□□ -0.36
CHD4-211ENST00000544484 DHDDSQ86SQ9 333 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 ZFP28Q8NHY6 868 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 SCAMP5Q8TAC9 235 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 RERGQ96A58 199 aaPredicted RBP12.79□□□□□ -0.36
CHD4-211ENST00000544484 NMUR2Q9GZQ4 415 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 AP3M1Q9Y2T2 418 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 FCF1Q9Y324 198 aaKnown RBP12.79□□□□□ -0.36
CHD4-211ENST00000544484 GMPPBQ9Y5P6 360 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 PDE4DIPQ5VU43 2346 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 PTPRJQ12913 1337 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 ACSL4O60488 711 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 PARP8Q8N3A8 854 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 RPL10LQ96L21 214 aaKnown RBP12.79□□□□□ -0.36
CHD4-211ENST00000544484 APOLD1Q96LR9 279 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 BTBD9Q96Q07 612 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 SPRTNQ9H040 489 aaPredicted RBP12.79□□□□□ -0.36
CHD4-211ENST00000544484 ATG10Q9H0Y0 220 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 SLC28A3Q9HAS3 691 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 GTF2IRD1Q9UHL9 959 aa12.79□□□□□ -0.36
CHD4-211ENST00000544484 OR2AG2A6NM03 316 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 IDO1P14902 403 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 CRHR1P34998 444 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 GNA12Q03113 381 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 CA9Q16790 459 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 TRIQKQ629K1 86 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 YTHDF3Q7Z739 585 aaKnown RBP12.78□□□□□ -0.36
CHD4-211ENST00000544484 DAW1Q8N136 415 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 PHF10Q8WUB8 498 aaKnown RBP12.78□□□□□ -0.36
CHD4-211ENST00000544484 HBEGFQ99075 208 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 ADI1Q9BV57 179 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 SDCBP2Q9H190 292 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 ZNF510Q9Y2H8 683 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 TK2O00142 265 aa12.78□□□□□ -0.36
CHD4-211ENST00000544484 VNN1O95497 513 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms