RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 HOOK3Q86VS8 718 aa14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 NRSN1Q8IZ57 195 aa14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 CBARPQ8N350 705 aaPredicted RBP14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 TTC30BQ8N4P2 665 aa14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 SUMF1Q8NBK3 374 aa14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 TP53I13Q8NBR0 393 aaPredicted RBP14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 MCUQ8NE86 351 aa14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 DENND6BQ8NEG7 585 aa14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 CENPTQ96BT3 561 aa14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 EID2BQ96D98 161 aa14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 LENG8Q96PV6 779 aaPredicted RBP14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 KLF6Q99612 283 aaPredicted RBP14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 HINFPQ9BQA5 517 aa14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 ORAI3Q9BRQ5 295 aa14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 ARRDC1-AS1Q9H2J1 176 aa14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 TM9SF3Q9HD45 589 aa14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 MBNL1Q9NR56 388 aaKnown RBP14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 BFARQ9NZS9 450 aa14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 ANAPC5Q9UJX4 755 aa14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 FNDC3AQ9Y2H6 1198 aaKnown RBP14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 SLCO1B1Q9Y6L6 691 aa14.46□□□□□ -0.1
TNFRSF1A-216ENST00000543995 SCN8AQ9UQD0 1980 aa14.45□□□□□ -0.1
TNFRSF1A-216ENST00000543995 RALGAPA1Q6GYQ0 2036 aa14.45□□□□□ -0.1
TNFRSF1A-216ENST00000543995 A0A1B0GTW7 788 aa14.45□□□□□ -0.1
TNFRSF1A-216ENST00000543995 PRR5-ARHGAP8B1AHC4 643 aa14.45□□□□□ -0.1
TNFRSF1A-216ENST00000543995 AVILO75366 819 aa14.45□□□□□ -0.1
TNFRSF1A-216ENST00000543995 SEC31AO94979 1220 aaKnown RBP14.45□□□□□ -0.1
TNFRSF1A-216ENST00000543995 MPLP40238 635 aa14.45□□□□□ -0.1
TNFRSF1A-216ENST00000543995 NPY2RP49146 381 aa14.45□□□□□ -0.1
TNFRSF1A-216ENST00000543995 NHLH1Q02575 133 aa14.45□□□□□ -0.1
TNFRSF1A-216ENST00000543995 LAMB3Q13751 1172 aa14.45□□□□□ -0.1
TNFRSF1A-216ENST00000543995 CCDC38Q502W7 563 aa14.45□□□□□ -0.1
TNFRSF1A-216ENST00000543995 RAET1GQ6H3X3 334 aa14.45□□□□□ -0.1
TNFRSF1A-216ENST00000543995 ZNF534Q76KX8 674 aa14.45□□□□□ -0.1
TNFRSF1A-216ENST00000543995 RAVER1Q8IY67 606 aaKnown RBP14.45□□□□□ -0.1
TNFRSF1A-216ENST00000543995 PPHLN1Q8NEY8 458 aaKnown RBP14.45□□□□□ -0.1
TNFRSF1A-216ENST00000543995 AP2M1Q96CW1 435 aa14.45□□□□□ -0.1
TNFRSF1A-216ENST00000543995 SERPINB12Q96P63 405 aa14.45□□□□□ -0.1
TNFRSF1A-216ENST00000543995 IL22Q9GZX6 179 aa14.45□□□□□ -0.1
TNFRSF1A-216ENST00000543995 ABCG8Q9H221 673 aa14.45□□□□□ -0.1
TNFRSF1A-216ENST00000543995 FAM83DQ9H4H8 585 aa14.45□□□□□ -0.1
TNFRSF1A-216ENST00000543995 XAB2Q9HCS7 855 aaKnown RBP14.45□□□□□ -0.1
TNFRSF1A-216ENST00000543995 RAD18Q9NS91 495 aa14.45□□□□□ -0.1
TNFRSF1A-216ENST00000543995 IL17CQ9P0M4 197 aa14.45□□□□□ -0.1
TNFRSF1A-216ENST00000543995 NCDNQ9UBB6 729 aa14.45□□□□□ -0.1
TNFRSF1A-216ENST00000543995 PCDHGA5Q9Y5G8 931 aa14.45□□□□□ -0.1
TNFRSF1A-216ENST00000543995 HS3ST3A1Q9Y663 406 aa14.45□□□□□ -0.1
TNFRSF1A-216ENST00000543995 USP34Q70CQ2 3546 aa14.45□□□□□ -0.1
TNFRSF1A-216ENST00000543995 GON4LQ3T8J9 2241 aa14.44□□□□□ -0.1
TNFRSF1A-216ENST00000543995 CCDC78A2IDD5 438 aa14.44□□□□□ -0.1
TNFRSF1A-216ENST00000543995 HEATR9A2RTY3 570 aa14.44□□□□□ -0.1
TNFRSF1A-216ENST00000543995 RGSL1A5PLK6 1076 aa14.44□□□□□ -0.1
TNFRSF1A-216ENST00000543995 A6NNZ2 444 aa14.44□□□□□ -0.1
TNFRSF1A-216ENST00000543995 H0Y8X5 98 aa14.44□□□□□ -0.1
TNFRSF1A-216ENST00000543995 SMAPO00193 183 aa14.44□□□□□ -0.1
TNFRSF1A-216ENST00000543995 CFIP05156 583 aa14.44□□□□□ -0.1
TNFRSF1A-216ENST00000543995 RETP07949 1114 aa14.44□□□□□ -0.1
TNFRSF1A-216ENST00000543995 MLNP12872 115 aa14.44□□□□□ -0.1
TNFRSF1A-216ENST00000543995 MGAT1P26572 445 aa14.44□□□□□ -0.1
TNFRSF1A-216ENST00000543995 HOXD12P35452 270 aa14.44□□□□□ -0.1
TNFRSF1A-216ENST00000543995 IGFALSP35858 605 aa14.44□□□□□ -0.1
TNFRSF1A-216ENST00000543995 AFF3P51826 1226 aaKnown RBP14.44□□□□□ -0.1
TNFRSF1A-216ENST00000543995 CRADDP78560 199 aa14.44□□□□□ -0.1
TNFRSF1A-216ENST00000543995 TMPRSS15P98073 1019 aa14.44□□□□□ -0.1
TNFRSF1A-216ENST00000543995 PTPRCAPQ14761 206 aa14.44□□□□□ -0.1
TNFRSF1A-216ENST00000543995 TEAD4Q15561 434 aa14.44□□□□□ -0.1
TNFRSF1A-216ENST00000543995 CCDC6Q16204 474 aa14.44□□□□□ -0.1
TNFRSF1A-216ENST00000543995 DUOXA1Q1HG43 343 aa14.44□□□□□ -0.1
TNFRSF1A-216ENST00000543995 GLE1Q53GS7 698 aaKnown RBP14.44□□□□□ -0.1
TNFRSF1A-216ENST00000543995 ALS2CLQ60I27 953 aa14.44□□□□□ -0.1
TNFRSF1A-216ENST00000543995 DUPD1Q68J44 220 aa14.44□□□□□ -0.1
TNFRSF1A-216ENST00000543995 HIBCHQ6NVY1 386 aaPredicted RBP14.44□□□□□ -0.1
TNFRSF1A-216ENST00000543995 GCNT7Q6ZNI0 430 aa14.44□□□□□ -0.1
TNFRSF1A-216ENST00000543995 PTAR1Q7Z6K3 402 aaPredicted RBP14.44□□□□□ -0.1
TNFRSF1A-216ENST00000543995 RABEPKQ7Z6M1 372 aa14.44□□□□□ -0.1
TNFRSF1A-216ENST00000543995 TMEM145Q8NBT3 493 aa14.44□□□□□ -0.1
TNFRSF1A-216ENST00000543995 GPR26Q8NDV2 337 aa14.44□□□□□ -0.1
TNFRSF1A-216ENST00000543995 OR4K2Q8NGD2 314 aa14.44□□□□□ -0.1
TNFRSF1A-216ENST00000543995 SCAMP4Q969E2 229 aa14.44□□□□□ -0.1
TNFRSF1A-216ENST00000543995 SKA1Q96BD8 255 aa14.44□□□□□ -0.1
TNFRSF1A-216ENST00000543995 RIOK2Q9BVS4 552 aaKnown RBP14.44□□□□□ -0.1
TNFRSF1A-216ENST00000543995 WHRNQ9P202 907 aa14.44□□□□□ -0.1
TNFRSF1A-216ENST00000543995 KCTD3Q9Y597 815 aa14.44□□□□□ -0.1
TNFRSF1A-216ENST00000543995 POM121BA6NF01 834 aa14.43□□□□□ -0.1
TNFRSF1A-216ENST00000543995 LDB2O43679 373 aa14.43□□□□□ -0.1
TNFRSF1A-216ENST00000543995 PPFIA2O75334 1257 aa14.43□□□□□ -0.1
TNFRSF1A-216ENST00000543995 BPIP17213 487 aa14.43□□□□□ -0.1
TNFRSF1A-216ENST00000543995 ADRA1DP25100 572 aa14.43□□□□□ -0.1
TNFRSF1A-216ENST00000543995 CD38P28907 300 aa14.43□□□□□ -0.1
TNFRSF1A-216ENST00000543995 GPR1P46091 355 aa14.43□□□□□ -0.1
TNFRSF1A-216ENST00000543995 CSNK1EP49674 416 aaKnown RBP14.43□□□□□ -0.1
TNFRSF1A-216ENST00000543995 C21orf59P57076 290 aa14.43□□□□□ -0.1
TNFRSF1A-216ENST00000543995 GUCY2DQ02846 1103 aa14.43□□□□□ -0.1
TNFRSF1A-216ENST00000543995 INPP5AQ14642 412 aa14.43□□□□□ -0.1
TNFRSF1A-216ENST00000543995 PCID2Q5JVF3 399 aa14.43□□□□□ -0.1
TNFRSF1A-216ENST00000543995 PEAR1Q5VY43 1037 aaPredicted RBP14.43□□□□□ -0.1
TNFRSF1A-216ENST00000543995 ZDHHC20Q5W0Z9 365 aa14.43□□□□□ -0.1
TNFRSF1A-216ENST00000543995 ESRP1Q6NXG1 681 aaKnown RBP14.43□□□□□ -0.1
TNFRSF1A-216ENST00000543995 PNCKQ6P2M8 343 aa14.43□□□□□ -0.1
TNFRSF1A-216ENST00000543995 CASC4Q6P4E1 433 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms