RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 NOD2Q9HC29 1040 aa17.4■□□□□ 0.38
PPP1CA-210ENST00000542876 RTN4Q9NQC3 1192 aaKnown RBP17.4■□□□□ 0.38
PPP1CA-210ENST00000542876 AIPL1Q9NZN9 384 aa17.4■□□□□ 0.38
PPP1CA-210ENST00000542876 TAAR2Q9P1P5 351 aa17.4■□□□□ 0.38
PPP1CA-210ENST00000542876 SUFUQ9UMX1 484 aa17.4■□□□□ 0.38
PPP1CA-210ENST00000542876 B4GAT1O43505 415 aa17.39■□□□□ 0.37
PPP1CA-210ENST00000542876 ECEL1O95672 775 aa17.39■□□□□ 0.37
PPP1CA-210ENST00000542876 FGF1P05230 155 aa17.39■□□□□ 0.37
PPP1CA-210ENST00000542876 CR2P20023 1033 aa17.39■□□□□ 0.37
PPP1CA-210ENST00000542876 AMPD1P23109 780 aa17.39■□□□□ 0.37
PPP1CA-210ENST00000542876 ETV5P41161 510 aa17.39■□□□□ 0.37
PPP1CA-210ENST00000542876 CDH6P55285 790 aa17.39■□□□□ 0.37
PPP1CA-210ENST00000542876 CDK3Q00526 305 aa17.39■□□□□ 0.37
PPP1CA-210ENST00000542876 NFATC3Q12968 1075 aa17.39■□□□□ 0.37
PPP1CA-210ENST00000542876 ARMC12Q5T9G4 340 aa17.39■□□□□ 0.37
PPP1CA-210ENST00000542876 MARC1Q5VT66 337 aa17.39■□□□□ 0.37
PPP1CA-210ENST00000542876 SLC30A9Q6PML9 568 aa17.39■□□□□ 0.37
PPP1CA-210ENST00000542876 EXTL1Q92935 676 aa17.39■□□□□ 0.37
PPP1CA-210ENST00000542876 SCRN2Q96FV2 425 aa17.39■□□□□ 0.37
PPP1CA-210ENST00000542876 MGME1Q9BQP7 344 aa17.39■□□□□ 0.37
PPP1CA-210ENST00000542876 B3GNT4Q9C0J1 378 aa17.39■□□□□ 0.37
PPP1CA-210ENST00000542876 CLMPQ9H6B4 373 aa17.39■□□□□ 0.37
PPP1CA-210ENST00000542876 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.39■□□□□ 0.37
PPP1CA-210ENST00000542876 FOXJ2Q9P0K8 574 aa17.39■□□□□ 0.37
PPP1CA-210ENST00000542876 LRRK1Q38SD2 2015 aa17.38■□□□□ 0.37
PPP1CA-210ENST00000542876 SMTNL1A8MU46 457 aa17.38■□□□□ 0.37
PPP1CA-210ENST00000542876 DDX3XO00571 662 aaKnown RBP eCLIP17.38■□□□□ 0.375e-11■■■■□ 22.8
PPP1CA-210ENST00000542876 HGSO14964 777 aaPredicted RBP17.38■□□□□ 0.37
PPP1CA-210ENST00000542876 MAFKO60675 156 aa17.38■□□□□ 0.37
PPP1CA-210ENST00000542876 MBD3O95983 291 aa17.38■□□□□ 0.37
PPP1CA-210ENST00000542876 SFTPCP11686 197 aa17.38■□□□□ 0.37
PPP1CA-210ENST00000542876 AK4P27144 223 aaPredicted RBP17.38■□□□□ 0.37
PPP1CA-210ENST00000542876 TEAD1P28347 426 aa17.38■□□□□ 0.37
PPP1CA-210ENST00000542876 PRKCIP41743 596 aa17.38■□□□□ 0.37
PPP1CA-210ENST00000542876 MMP13P45452 471 aa17.38■□□□□ 0.37
PPP1CA-210ENST00000542876 GPR3P46089 330 aa17.38■□□□□ 0.37
PPP1CA-210ENST00000542876 GPR1P46091 355 aa17.38■□□□□ 0.37
PPP1CA-210ENST00000542876 KCNC4Q03721 635 aa17.38■□□□□ 0.37
PPP1CA-210ENST00000542876 TYRO3Q06418 890 aa17.38■□□□□ 0.37
PPP1CA-210ENST00000542876 TRAF2Q12933 501 aa17.38■□□□□ 0.37
PPP1CA-210ENST00000542876 C16orf72Q14CZ0 275 aa17.38■□□□□ 0.37
PPP1CA-210ENST00000542876 DOK6Q6PKX4 331 aa17.38■□□□□ 0.37
PPP1CA-210ENST00000542876 Q6ZVL8 140 aa17.38■□□□□ 0.37
PPP1CA-210ENST00000542876 TMPRSS9Q7Z410 1059 aa17.38■□□□□ 0.37
PPP1CA-210ENST00000542876 ZNF438Q7Z4V0 828 aa17.38■□□□□ 0.37
PPP1CA-210ENST00000542876 HSD11B1LQ7Z5J1 315 aa17.38■□□□□ 0.37
PPP1CA-210ENST00000542876 POLNQ7Z5Q5 900 aa17.38■□□□□ 0.37
PPP1CA-210ENST00000542876 VASH2Q86V25 355 aa17.38■□□□□ 0.37
PPP1CA-210ENST00000542876 C17orf82Q86X59 251 aaPredicted RBP17.38■□□□□ 0.37
PPP1CA-210ENST00000542876 NRROSQ86YC3 692 aa17.38■□□□□ 0.37
PPP1CA-210ENST00000542876 PGBD5Q8N414 524 aa17.38■□□□□ 0.37
PPP1CA-210ENST00000542876 EXD3Q8N9H8 876 aa17.38■□□□□ 0.37
PPP1CA-210ENST00000542876 CCDC112Q8NEF3 446 aa17.38■□□□□ 0.37
PPP1CA-210ENST00000542876 CSPG4P5Q96PW8 444 aa17.38■□□□□ 0.37
PPP1CA-210ENST00000542876 FRMD8Q9BZ67 464 aaPredicted RBP17.38■□□□□ 0.37
PPP1CA-210ENST00000542876 ZMYND15Q9H091 742 aa17.38■□□□□ 0.37
PPP1CA-210ENST00000542876 CDH19Q9H159 772 aa17.38■□□□□ 0.37
PPP1CA-210ENST00000542876 LRP4O75096 1905 aa17.38■□□□□ 0.37
PPP1CA-210ENST00000542876 UNC13CQ8NB66 2214 aa17.37■□□□□ 0.37
PPP1CA-210ENST00000542876 NPIPB15A6NHN6 443 aaPredicted RBP17.37■□□□□ 0.37
PPP1CA-210ENST00000542876 C9orf172C9J069 976 aa17.37■□□□□ 0.37
PPP1CA-210ENST00000542876 STMND1H3BQB6 276 aa17.37■□□□□ 0.37
PPP1CA-210ENST00000542876 PGLSO95336 258 aa17.37■□□□□ 0.37
PPP1CA-210ENST00000542876 PEX11BO96011 259 aa17.37■□□□□ 0.37
PPP1CA-210ENST00000542876 LHCGRP22888 699 aa17.37■□□□□ 0.37
PPP1CA-210ENST00000542876 IL1R2P27930 398 aa17.37■□□□□ 0.37
PPP1CA-210ENST00000542876 PPM1FP49593 454 aaPredicted RBP17.37■□□□□ 0.37
PPP1CA-210ENST00000542876 ATP1A2P50993 1020 aa17.37■□□□□ 0.37
PPP1CA-210ENST00000542876 MAXP61244 160 aa17.37■□□□□ 0.37
PPP1CA-210ENST00000542876 CTBSQ01459 385 aa17.37■□□□□ 0.37
PPP1CA-210ENST00000542876 ITKQ08881 620 aa17.37■□□□□ 0.37
PPP1CA-210ENST00000542876 SRSF6Q13247 344 aaKnown RBP17.37■□□□□ 0.37
PPP1CA-210ENST00000542876 TRA2AQ13595 282 aaKnown RBP eCLIP17.37■□□□□ 0.37
PPP1CA-210ENST00000542876 PIGHQ14442 188 aaPredicted RBP17.37■□□□□ 0.37
PPP1CA-210ENST00000542876 NR1D2Q14995 579 aa17.37■□□□□ 0.37
PPP1CA-210ENST00000542876 NUDT22Q9BRQ3 303 aa17.37■□□□□ 0.37
PPP1CA-210ENST00000542876 ETNK2Q9NVF9 386 aa17.37■□□□□ 0.37
PPP1CA-210ENST00000542876 SLC17A4Q9Y2C5 497 aa17.37■□□□□ 0.37
PPP1CA-210ENST00000542876 PCDHGA4Q9Y5G9 962 aa17.37■□□□□ 0.37
PPP1CA-210ENST00000542876 IGHV5-10-1A0A0J9YXX1 117 aa17.36■□□□□ 0.37
PPP1CA-210ENST00000542876 FUCA1P04066 466 aa17.36■□□□□ 0.37
PPP1CA-210ENST00000542876 IVLP07476 585 aa17.36■□□□□ 0.37
PPP1CA-210ENST00000542876 RARAP10276 462 aa17.36■□□□□ 0.37
PPP1CA-210ENST00000542876 CTPS1P17812 591 aa17.36■□□□□ 0.37
PPP1CA-210ENST00000542876 CD1CP29017 333 aa17.36■□□□□ 0.37
PPP1CA-210ENST00000542876 ADCY8P40145 1251 aa17.36■□□□□ 0.37
PPP1CA-210ENST00000542876 ACTR1BP42025 376 aa17.36■□□□□ 0.37
PPP1CA-210ENST00000542876 POLD2P49005 469 aa17.36■□□□□ 0.37
PPP1CA-210ENST00000542876 ACTR1AP61163 376 aa17.36■□□□□ 0.37
PPP1CA-210ENST00000542876 DPTQ07507 201 aa17.36■□□□□ 0.37
PPP1CA-210ENST00000542876 KRT81Q14533 505 aa17.36■□□□□ 0.37
PPP1CA-210ENST00000542876 LINC00303Q3SY05 128 aa17.36■□□□□ 0.37
PPP1CA-210ENST00000542876 ANO6Q4KMQ2 910 aa17.36■□□□□ 0.37
PPP1CA-210ENST00000542876 TSPAN33Q86UF1 283 aa17.36■□□□□ 0.37
PPP1CA-210ENST00000542876 DTX1Q86Y01 620 aa17.36■□□□□ 0.37
PPP1CA-210ENST00000542876 LRRC49Q8IUZ0 686 aa17.36■□□□□ 0.37
PPP1CA-210ENST00000542876 CBARPQ8N350 705 aaPredicted RBP17.36■□□□□ 0.37
PPP1CA-210ENST00000542876 RCBTB1Q8NDN9 531 aa17.36■□□□□ 0.37
PPP1CA-210ENST00000542876 TEKT4Q8WW24 435 aa17.36■□□□□ 0.37
PPP1CA-210ENST00000542876 AP2M1Q96CW1 435 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms