RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 DPYSL2Q16555 572 aa11.85□□□□□ -0.51
PTPN6-219ENST00000542848 MANEAQ5SRI9 462 aa11.85□□□□□ -0.51
PTPN6-219ENST00000542848 PHF19Q5T6S3 580 aa11.85□□□□□ -0.51
PTPN6-219ENST00000542848 TMEM164Q5U3C3 297 aa11.85□□□□□ -0.51
PTPN6-219ENST00000542848 ZNF571Q7Z3V5 609 aaPredicted RBP11.85□□□□□ -0.51
PTPN6-219ENST00000542848 TMPRSS9Q7Z410 1059 aa11.85□□□□□ -0.51
PTPN6-219ENST00000542848 HEATR4Q86WZ0 1026 aa11.85□□□□□ -0.51
PTPN6-219ENST00000542848 DTX1Q86Y01 620 aa11.85□□□□□ -0.51
PTPN6-219ENST00000542848 TP53INP2Q8IXH6 220 aa11.85□□□□□ -0.51
PTPN6-219ENST00000542848 BBS5Q8N3I7 341 aa11.85□□□□□ -0.51
PTPN6-219ENST00000542848 PGBD5Q8N414 524 aa11.85□□□□□ -0.51
PTPN6-219ENST00000542848 ZDHHC1Q8WTX9 485 aa11.85□□□□□ -0.51
PTPN6-219ENST00000542848 PDCD6IPQ8WUM4 868 aaKnown RBP11.85□□□□□ -0.51
PTPN6-219ENST00000542848 TRIM11Q96F44 468 aa11.85□□□□□ -0.51
PTPN6-219ENST00000542848 DTD2Q96FN9 168 aa11.85□□□□□ -0.51
PTPN6-219ENST00000542848 SCRN2Q96FV2 425 aa11.85□□□□□ -0.51
PTPN6-219ENST00000542848 FRMD8Q9BZ67 464 aaPredicted RBP11.85□□□□□ -0.51
PTPN6-219ENST00000542848 TRIM7Q9C029 511 aa11.85□□□□□ -0.51
PTPN6-219ENST00000542848 SEMA6CQ9H3T2 930 aa11.85□□□□□ -0.51
PTPN6-219ENST00000542848 HAUS4Q9H6D7 363 aa11.85□□□□□ -0.51
PTPN6-219ENST00000542848 TAAR2Q9P1P5 351 aa11.85□□□□□ -0.51
PTPN6-219ENST00000542848 C9orf172C9J069 976 aa11.84□□□□□ -0.51
PTPN6-219ENST00000542848 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.84□□□□□ -0.51
PTPN6-219ENST00000542848 HGSO14964 777 aaPredicted RBP11.84□□□□□ -0.51
PTPN6-219ENST00000542848 SLC28A2O43868 658 aa11.84□□□□□ -0.51
PTPN6-219ENST00000542848 CPP00450 1065 aa11.84□□□□□ -0.51
PTPN6-219ENST00000542848 MYBL1P10243 752 aa11.84□□□□□ -0.51
PTPN6-219ENST00000542848 SFTPCP11686 197 aa11.84□□□□□ -0.51
PTPN6-219ENST00000542848 AMPD1P23109 780 aa11.84□□□□□ -0.51
PTPN6-219ENST00000542848 ALDH4A1P30038 563 aa11.84□□□□□ -0.51
PTPN6-219ENST00000542848 ETV3P41162 512 aa11.84□□□□□ -0.51
PTPN6-219ENST00000542848 OR1D5P58170 312 aa11.84□□□□□ -0.51
PTPN6-219ENST00000542848 CDK3Q00526 305 aa11.84□□□□□ -0.51
PTPN6-219ENST00000542848 DPTQ07507 201 aa11.84□□□□□ -0.51
PTPN6-219ENST00000542848 SQSTM1Q13501 440 aa11.84□□□□□ -0.51
PTPN6-219ENST00000542848 C16orf72Q14CZ0 275 aa11.84□□□□□ -0.51
PTPN6-219ENST00000542848 MAP9Q49MG5 647 aa11.84□□□□□ -0.51
PTPN6-219ENST00000542848 DENND2CQ68D51 928 aa11.84□□□□□ -0.51
PTPN6-219ENST00000542848 TMCO3Q6UWJ1 677 aa11.84□□□□□ -0.51
PTPN6-219ENST00000542848 ZNF574Q6ZN55 896 aaPredicted RBP11.84□□□□□ -0.51
PTPN6-219ENST00000542848 POLNQ7Z5Q5 900 aa11.84□□□□□ -0.51
PTPN6-219ENST00000542848 ZFAND4Q86XD8 727 aa11.84□□□□□ -0.51
PTPN6-219ENST00000542848 ZSCAN1Q8NBB4 408 aa11.84□□□□□ -0.51
PTPN6-219ENST00000542848 RNF214Q8ND24 703 aa11.84□□□□□ -0.51
PTPN6-219ENST00000542848 NSMCE1Q8WV22 266 aa11.84□□□□□ -0.51
PTPN6-219ENST00000542848 ZNF653Q96CK0 615 aa11.84□□□□□ -0.51
PTPN6-219ENST00000542848 SEMA3CQ99985 751 aa11.84□□□□□ -0.51
PTPN6-219ENST00000542848 MGME1Q9BQP7 344 aa11.84□□□□□ -0.51
PTPN6-219ENST00000542848 ARHGAP9Q9BRR9 750 aa11.84□□□□□ -0.51
PTPN6-219ENST00000542848 ISCUQ9H1K1 167 aa11.84□□□□□ -0.51
PTPN6-219ENST00000542848 CLMPQ9H6B4 373 aa11.84□□□□□ -0.51
PTPN6-219ENST00000542848 NOD2Q9HC29 1040 aa11.84□□□□□ -0.51
PTPN6-219ENST00000542848 CBX8Q9HC52 389 aa11.84□□□□□ -0.51
PTPN6-219ENST00000542848 SUFUQ9UMX1 484 aa11.84□□□□□ -0.51
PTPN6-219ENST00000542848 SLC17A4Q9Y2C5 497 aa11.84□□□□□ -0.51
PTPN6-219ENST00000542848 PPIL1Q9Y3C6 166 aa11.84□□□□□ -0.51
PTPN6-219ENST00000542848 DDX3XO00571 662 aaKnown RBP eCLIP11.83□□□□□ -0.52
PTPN6-219ENST00000542848 MAFKO60675 156 aa11.83□□□□□ -0.52
PTPN6-219ENST00000542848 ECEL1O95672 775 aa11.83□□□□□ -0.52
PTPN6-219ENST00000542848 IVLP07476 585 aa11.83□□□□□ -0.52
PTPN6-219ENST00000542848 KRT10P13645 584 aa11.83□□□□□ -0.52
PTPN6-219ENST00000542848 LHCGRP22888 699 aa11.83□□□□□ -0.52
PTPN6-219ENST00000542848 AK4P27144 223 aaPredicted RBP11.83□□□□□ -0.52
PTPN6-219ENST00000542848 IL1R2P27930 398 aa11.83□□□□□ -0.52
PTPN6-219ENST00000542848 CD1CP29017 333 aa11.83□□□□□ -0.52
PTPN6-219ENST00000542848 GNPDA1P46926 289 aa11.83□□□□□ -0.52
PTPN6-219ENST00000542848 CDH6P55285 790 aa11.83□□□□□ -0.52
PTPN6-219ENST00000542848 MAZP56270 477 aaKnown RBP11.83□□□□□ -0.52
PTPN6-219ENST00000542848 CTBSQ01459 385 aa11.83□□□□□ -0.52
PTPN6-219ENST00000542848 KCNC4Q03721 635 aa11.83□□□□□ -0.52
PTPN6-219ENST00000542848 KLHL30Q0D2K2 578 aa11.83□□□□□ -0.52
PTPN6-219ENST00000542848 TRAF2Q12933 501 aa11.83□□□□□ -0.52
PTPN6-219ENST00000542848 SRSF6Q13247 344 aaKnown RBP11.83□□□□□ -0.52
PTPN6-219ENST00000542848 TRA2AQ13595 282 aaKnown RBP eCLIP11.83□□□□□ -0.52
PTPN6-219ENST00000542848 AMZ1Q400G9 498 aa11.83□□□□□ -0.52
PTPN6-219ENST00000542848 FILIP1LQ4L180 1135 aa11.83□□□□□ -0.52
PTPN6-219ENST00000542848 MARC1Q5VT66 337 aa11.83□□□□□ -0.52
PTPN6-219ENST00000542848 Q6ZVL8 140 aa11.83□□□□□ -0.52
PTPN6-219ENST00000542848 HSD11B1LQ7Z5J1 315 aa11.83□□□□□ -0.52
PTPN6-219ENST00000542848 TECPR1Q7Z6L1 1165 aa11.83□□□□□ -0.52
PTPN6-219ENST00000542848 NLRP8Q86W28 1048 aa11.83□□□□□ -0.52
PTPN6-219ENST00000542848 LRRC49Q8IUZ0 686 aa11.83□□□□□ -0.52
PTPN6-219ENST00000542848 NAGSQ8N159 534 aa11.83□□□□□ -0.52
PTPN6-219ENST00000542848 NDUFAF2Q8N183 169 aa11.83□□□□□ -0.52
PTPN6-219ENST00000542848 AOPEPQ8N6M6 819 aa11.83□□□□□ -0.52
PTPN6-219ENST00000542848 EXTL1Q92935 676 aa11.83□□□□□ -0.52
PTPN6-219ENST00000542848 SCARF2Q96GP6 870 aaPredicted RBP11.83□□□□□ -0.52
PTPN6-219ENST00000542848 TAAR9Q96RI9 348 aa11.83□□□□□ -0.52
PTPN6-219ENST00000542848 MCCC1Q96RQ3 725 aaPredicted RBP11.83□□□□□ -0.52
PTPN6-219ENST00000542848 DPYSL5Q9BPU6 564 aa11.83□□□□□ -0.52
PTPN6-219ENST00000542848 FAM117AQ9C073 453 aa11.83□□□□□ -0.52
PTPN6-219ENST00000542848 RDH14Q9HBH5 336 aa11.83□□□□□ -0.52
PTPN6-219ENST00000542848 ETNK2Q9NVF9 386 aa11.83□□□□□ -0.52
PTPN6-219ENST00000542848 FOXJ2Q9P0K8 574 aa11.83□□□□□ -0.52
PTPN6-219ENST00000542848 MYO1AQ9UBC5 1043 aa11.83□□□□□ -0.52
PTPN6-219ENST00000542848 PCDHGA4Q9Y5G9 962 aa11.83□□□□□ -0.52
PTPN6-219ENST00000542848 UBR5O95071 2799 aaPredicted RBP11.83□□□□□ -0.52
PTPN6-219ENST00000542848 ZNF106Q9H2Y7 1883 aaKnown RBP11.83□□□□□ -0.52
PTPN6-219ENST00000542848 BSNQ9UPA5 3926 aa11.82□□□□□ -0.52
PTPN6-219ENST00000542848 NAV2Q8IVL1 2488 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms