RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 CCR1P32246 355 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 CD86P42081 329 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 ALDH3B2P48448 385 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 CDKN2DP55273 166 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 WNT3AP56704 352 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 TRAF2Q12933 501 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 HECTD2Q5U5R9 776 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 EPHX4Q8IUS5 362 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 TMEM126BQ8IUX1 230 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 CMTR2Q8IYT2 770 aaKnown RBP15.32■□□□□ 0.04
CNOT9-208ENST00000542068 FNDC8Q8TC99 324 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 HDAC10Q969S8 669 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 PLEKHG4BQ96PX9 1271 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 MCMBPQ9BTE3 642 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 A0A087WXM4 84 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 TCRBV3S1A0A5B6 114 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 UBXN8O00124 270 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 SLC22A2O15244 555 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 ZSCAN9O15535 394 aaPredicted RBP15.32■□□□□ 0.04
CNOT9-208ENST00000542068 GJB3O75712 270 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 GFAPP14136 432 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 PAMP19021 973 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 CAPN3P20807 821 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 FUT4P22083 530 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 PRKAA2P54646 552 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 PSMD5Q16401 504 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 NUDT8Q8WV74 236 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 TFAP2CQ92754 450 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 MAELQ96JY0 434 aaKnown RBP15.32■□□□□ 0.04
CNOT9-208ENST00000542068 HBEGFQ99075 208 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 SEPT5Q99719 369 aaPredicted RBP15.32■□□□□ 0.04
CNOT9-208ENST00000542068 MTG1Q9BT17 334 aaPredicted RBP15.32■□□□□ 0.04
CNOT9-208ENST00000542068 C1orf50Q9BV19 199 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 SEMA4BQ9NPR2 832 aaPredicted RBP15.32■□□□□ 0.04
CNOT9-208ENST00000542068 MARCH4Q9P2E8 410 aaPredicted RBP15.32■□□□□ 0.04
CNOT9-208ENST00000542068 HTTP42858 3142 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 NT5C1B-RDH14C9J2C7 533 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 MGEA5O60502 916 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 KCNH1O95259 989 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 AKR1A1P14550 325 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 FASP25445 335 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 PSMA4P25789 261 aaKnown RBP15.32■□□□□ 0.04
CNOT9-208ENST00000542068 SCNN1AP37088 669 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 ARSDP51689 593 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 DIO3P55073 304 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 MERTKQ12866 999 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 PPP1R8Q12972 351 aaKnown RBP15.32■□□□□ 0.04
CNOT9-208ENST00000542068 SEMA3BQ13214 749 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 TMEM207Q6UWW9 146 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 PCYOX1LQ8NBM8 494 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 PDZD8Q8NEN9 1154 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 EXOC2Q96KP1 924 aa15.32■□□□□ 0.04
CNOT9-208ENST00000542068 FAM193BQ96PV7 902 aaPredicted RBP15.32■□□□□ 0.04
CNOT9-208ENST00000542068 UBA6A0AVT1 1052 aaPredicted RBP15.31■□□□□ 0.04
CNOT9-208ENST00000542068 GABRDO14764 452 aa15.31■□□□□ 0.04
CNOT9-208ENST00000542068 ANXA9O76027 345 aa15.31■□□□□ 0.04
CNOT9-208ENST00000542068 PRSS56P0CW18 603 aa15.31■□□□□ 0.04
CNOT9-208ENST00000542068 COL6A2P12110 1019 aa15.31■□□□□ 0.04
CNOT9-208ENST00000542068 HGFP14210 728 aa15.31■□□□□ 0.04
CNOT9-208ENST00000542068 KPNA2P52292 529 aaKnown RBP15.31■□□□□ 0.04
CNOT9-208ENST00000542068 SH3BP2P78314 561 aa15.31■□□□□ 0.04
CNOT9-208ENST00000542068 FRG1Q14331 258 aaKnown RBP15.31■□□□□ 0.04
CNOT9-208ENST00000542068 ERMP1Q7Z2K6 904 aa15.31■□□□□ 0.04
CNOT9-208ENST00000542068 KCTD13Q8WZ19 329 aa15.31■□□□□ 0.04
CNOT9-208ENST00000542068 RANBP9Q96S59 729 aa15.31■□□□□ 0.04
CNOT9-208ENST00000542068 NMUR1Q9HB89 426 aa15.31■□□□□ 0.04
CNOT9-208ENST00000542068 MRPL40Q9NQ50 206 aaKnown RBP15.31■□□□□ 0.04
CNOT9-208ENST00000542068 TMEM181Q9P2C4 612 aa15.31■□□□□ 0.04
CNOT9-208ENST00000542068 MAP10Q9P2G4 905 aa15.31■□□□□ 0.04
CNOT9-208ENST00000542068 CD300AQ9UGN4 299 aa15.31■□□□□ 0.04
CNOT9-208ENST00000542068 FADS3Q9Y5Q0 445 aa15.31■□□□□ 0.04
CNOT9-208ENST00000542068 KPNA6O60684 536 aa15.31■□□□□ 0.04
CNOT9-208ENST00000542068 SNAP29O95721 258 aa15.31■□□□□ 0.04
CNOT9-208ENST00000542068 HSPA1AP0DMV8 641 aaKnown RBP15.31■□□□□ 0.04
CNOT9-208ENST00000542068 HSPA1BP0DMV9 641 aaKnown RBP15.31■□□□□ 0.04
CNOT9-208ENST00000542068 ELNP15502 786 aa15.31■□□□□ 0.04
CNOT9-208ENST00000542068 ZNF182P17025 639 aaPredicted RBP15.31■□□□□ 0.04
CNOT9-208ENST00000542068 CLCN2P51788 898 aa15.31■□□□□ 0.04
CNOT9-208ENST00000542068 AARS2Q5JTZ9 985 aaKnown RBP15.31■□□□□ 0.04
CNOT9-208ENST00000542068 RALGPS2Q86X27 583 aaPredicted RBP15.31■□□□□ 0.04
CNOT9-208ENST00000542068 CAMK1DQ8IU85 385 aa15.31■□□□□ 0.04
CNOT9-208ENST00000542068 CFAP52Q8N1V2 620 aa15.31■□□□□ 0.04
CNOT9-208ENST00000542068 MEAF6Q9HAF1 191 aa15.31■□□□□ 0.04
CNOT9-208ENST00000542068 PLGRKTQ9HBL7 147 aa15.31■□□□□ 0.04
CNOT9-208ENST00000542068 VWA7Q9Y334 891 aa15.31■□□□□ 0.04
CNOT9-208ENST00000542068 MAGED1Q9Y5V3 778 aaPredicted RBP15.31■□□□□ 0.04
CNOT9-208ENST00000542068 COMMD10Q9Y6G5 202 aa15.31■□□□□ 0.04
CNOT9-208ENST00000542068 A0A087X1B8 175 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 A0A1B0GTL3 188 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 J3KR12 359 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 GPR182O15218 404 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 NUP107P57740 925 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 GNA12Q03113 381 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 NFYCQ13952 458 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 INPP5AQ14642 412 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 SLC44A4Q53GD3 710 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 TMEM214Q6NUQ4 689 aaKnown RBP15.3■□□□□ 0.04
CNOT9-208ENST00000542068 CYHR1Q6ZMK1 362 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 KCTD8Q6ZWB6 473 aa15.3■□□□□ 0.04
CNOT9-208ENST00000542068 SLC15A3Q8IY34 581 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms