RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 PLEKHG4BQ96PX9 1271 aa18.75■□□□□ 0.59
VPS33A-205ENST00000541169 TMEM9BQ9NQ34 198 aa18.75■□□□□ 0.59
VPS33A-205ENST00000541169 GPR27Q9NS67 375 aa18.75■□□□□ 0.59
VPS33A-205ENST00000541169 PKP3Q9Y446 797 aa18.75■□□□□ 0.59
VPS33A-205ENST00000541169 F5H423 210 aaPredicted RBP18.74■□□□□ 0.59
VPS33A-205ENST00000541169 RAD51BO15315 384 aa18.74■□□□□ 0.59
VPS33A-205ENST00000541169 APRTP07741 180 aa18.74■□□□□ 0.59
VPS33A-205ENST00000541169 IGFALSP35858 605 aa18.74■□□□□ 0.59
VPS33A-205ENST00000541169 ETV3P41162 512 aa18.74■□□□□ 0.59
VPS33A-205ENST00000541169 DHX34Q14147 1143 aaKnown RBP18.74■□□□□ 0.59
VPS33A-205ENST00000541169 SF3A2Q15428 464 aaKnown RBP18.74■□□□□ 0.59
VPS33A-205ENST00000541169 PPP1R7Q15435 360 aa18.74■□□□□ 0.59
VPS33A-205ENST00000541169 CCDC6Q16204 474 aa18.74■□□□□ 0.59
VPS33A-205ENST00000541169 ZNF423Q2M1K9 1284 aa18.74■□□□□ 0.59
VPS33A-205ENST00000541169 DENND2CQ68D51 928 aa18.74■□□□□ 0.59
VPS33A-205ENST00000541169 TTC27Q6P3X3 843 aa18.74■□□□□ 0.59
VPS33A-205ENST00000541169 Q6ZVL8 140 aa18.74■□□□□ 0.59
VPS33A-205ENST00000541169 LYSMD3Q7Z3D4 306 aa18.74■□□□□ 0.59
VPS33A-205ENST00000541169 PTAR1Q7Z6K3 402 aaPredicted RBP18.74■□□□□ 0.59
VPS33A-205ENST00000541169 KIF18AQ8NI77 898 aa18.74■□□□□ 0.59
VPS33A-205ENST00000541169 NETO1Q8TDF5 533 aa18.74■□□□□ 0.59
VPS33A-205ENST00000541169 AP2M1Q96CW1 435 aa18.74■□□□□ 0.59
VPS33A-205ENST00000541169 ZSCAN5AQ9BUG6 496 aa18.74■□□□□ 0.59
VPS33A-205ENST00000541169 EDEM2Q9BV94 578 aa18.74■□□□□ 0.59
VPS33A-205ENST00000541169 FAM83DQ9H4H8 585 aa18.74■□□□□ 0.59
VPS33A-205ENST00000541169 FZD3Q9NPG1 666 aa18.74■□□□□ 0.59
VPS33A-205ENST00000541169 DNAAF2Q9NVR5 837 aaKnown RBP18.74■□□□□ 0.59
VPS33A-205ENST00000541169 COQ6Q9Y2Z9 468 aa18.74■□□□□ 0.59
VPS33A-205ENST00000541169 PCDH15Q96QU1 1955 aa18.73■□□□□ 0.59
VPS33A-205ENST00000541169 FAM186AA6NE01 2351 aa18.73■□□□□ 0.59
VPS33A-205ENST00000541169 SPTY2D1-AS1A0A0U1RR47 76 aa18.73■□□□□ 0.59
VPS33A-205ENST00000541169 POM121BA6NF01 834 aa18.73■□□□□ 0.59
VPS33A-205ENST00000541169 CACNB4O00305 520 aaPredicted RBP18.73■□□□□ 0.59
VPS33A-205ENST00000541169 FANCGO15287 622 aa18.73■□□□□ 0.59
VPS33A-205ENST00000541169 WNT1P04628 370 aa18.73■□□□□ 0.59
VPS33A-205ENST00000541169 GM2AP17900 193 aa18.73■□□□□ 0.59
VPS33A-205ENST00000541169 TPSB2P20231 275 aa18.73■□□□□ 0.59
VPS33A-205ENST00000541169 LPOP22079 712 aaPredicted RBP18.73■□□□□ 0.59
VPS33A-205ENST00000541169 MAGEA6P43360 314 aa18.73■□□□□ 0.59
VPS33A-205ENST00000541169 BASP1P80723 227 aaKnown RBP18.73■□□□□ 0.59
VPS33A-205ENST00000541169 SEMG2Q02383 582 aa18.73■□□□□ 0.59
VPS33A-205ENST00000541169 INPP5AQ14642 412 aa18.73■□□□□ 0.59
VPS33A-205ENST00000541169 SUZ12Q15022 739 aaKnown RBP18.73■□□□□ 0.59
VPS33A-205ENST00000541169 TPSAB1Q15661 275 aa18.73■□□□□ 0.59
VPS33A-205ENST00000541169 KIF19Q2TAC6 998 aa18.73■□□□□ 0.59
VPS33A-205ENST00000541169 HLA-BQ31612 363 aa18.73■□□□□ 0.59
VPS33A-205ENST00000541169 PPP1R21Q6ZMI0 780 aa18.73■□□□□ 0.59
VPS33A-205ENST00000541169 MACC1Q6ZN28 852 aa18.73■□□□□ 0.59
VPS33A-205ENST00000541169 PCGF5Q86SE9 256 aa18.73■□□□□ 0.59
VPS33A-205ENST00000541169 ALYREFQ86V81 257 aaKnown RBP18.73■□□□□ 0.59
VPS33A-205ENST00000541169 DNAAF3Q8N9W5 541 aa18.73■□□□□ 0.59
VPS33A-205ENST00000541169 BLOC1S5Q8TDH9 187 aa18.73■□□□□ 0.59
VPS33A-205ENST00000541169 MYOCQ99972 504 aa18.73■□□□□ 0.59
VPS33A-205ENST00000541169 WDR26Q9H7D7 661 aa18.73■□□□□ 0.59
VPS33A-205ENST00000541169 PHPT1Q9NRX4 125 aaPredicted RBP18.73■□□□□ 0.59
VPS33A-205ENST00000541169 CDC23Q9UJX2 597 aa18.73■□□□□ 0.59
VPS33A-205ENST00000541169 PCDHGB2Q9Y5G2 931 aa18.73■□□□□ 0.59
VPS33A-205ENST00000541169 SLCO1B1Q9Y6L6 691 aa18.73■□□□□ 0.59
VPS33A-205ENST00000541169 DOCK9Q9BZ29 2069 aa18.73■□□□□ 0.59
VPS33A-205ENST00000541169 RIF1Q5UIP0 2472 aaKnown RBP18.72■□□□□ 0.59
VPS33A-205ENST00000541169 SMAPO00193 183 aa18.72■□□□□ 0.59
VPS33A-205ENST00000541169 TNFRSF10CO14798 259 aa18.72■□□□□ 0.59
VPS33A-205ENST00000541169 C1SP09871 688 aa18.72■□□□□ 0.59
VPS33A-205ENST00000541169 ETS1P14921 441 aa18.72■□□□□ 0.59
VPS33A-205ENST00000541169 HADHAP40939 763 aa18.72■□□□□ 0.59
VPS33A-205ENST00000541169 CHRNA4P43681 627 aa18.72■□□□□ 0.59
VPS33A-205ENST00000541169 RXRGP48443 463 aa18.72■□□□□ 0.59
VPS33A-205ENST00000541169 BLKP51451 505 aa18.72■□□□□ 0.59
VPS33A-205ENST00000541169 CLDN2P57739 230 aa18.72■□□□□ 0.59
VPS33A-205ENST00000541169 KIAA1024LP59773 190 aa18.72■□□□□ 0.59
VPS33A-205ENST00000541169 DR1Q01658 176 aa18.72■□□□□ 0.59
VPS33A-205ENST00000541169 GPS1Q13098 491 aa18.72■□□□□ 0.59
VPS33A-205ENST00000541169 WHAMMP3Q1A5X7 153 aa18.72■□□□□ 0.59
VPS33A-205ENST00000541169 DENND5AQ6IQ26 1287 aa18.72■□□□□ 0.59
VPS33A-205ENST00000541169 ADAMTSL4Q6UY14 1074 aa18.72■□□□□ 0.59
VPS33A-205ENST00000541169 NLRP9Q7RTR0 991 aa18.72■□□□□ 0.59
VPS33A-205ENST00000541169 ZNF572Q7Z3I7 529 aaPredicted RBP18.72■□□□□ 0.59
VPS33A-205ENST00000541169 MAATS1Q7Z4T9 603 aa18.72■□□□□ 0.59
VPS33A-205ENST00000541169 PARGQ86W56 976 aa18.72■□□□□ 0.59
VPS33A-205ENST00000541169 MINDY1Q8N5J2 469 aa18.72■□□□□ 0.59
VPS33A-205ENST00000541169 GLIS1Q8NBF1 620 aa18.72■□□□□ 0.59
VPS33A-205ENST00000541169 OR13H1Q8NG92 308 aa18.72■□□□□ 0.59
VPS33A-205ENST00000541169 BTN2A2Q8WVV5 523 aa18.72■□□□□ 0.59
VPS33A-205ENST00000541169 TBATAQ96M53 351 aa18.72■□□□□ 0.59
VPS33A-205ENST00000541169 ELF4Q99607 663 aaPredicted RBP18.72■□□□□ 0.59
VPS33A-205ENST00000541169 APOOQ9BUR5 198 aa18.72■□□□□ 0.59
VPS33A-205ENST00000541169 GTPBP2Q9BX10 602 aaKnown RBP18.72■□□□□ 0.59
VPS33A-205ENST00000541169 TEX101Q9BY14 249 aa18.72■□□□□ 0.59
VPS33A-205ENST00000541169 GAREM1Q9H706 876 aa18.72■□□□□ 0.59
VPS33A-205ENST00000541169 MBNL1Q9NR56 388 aaKnown RBP18.72■□□□□ 0.59
VPS33A-205ENST00000541169 SMARCAL1Q9NZC9 954 aa18.72■□□□□ 0.59
VPS33A-205ENST00000541169 SHOC2Q9UQ13 582 aa18.72■□□□□ 0.59
VPS33A-205ENST00000541169 NEU2Q9Y3R4 380 aa18.72■□□□□ 0.59
VPS33A-205ENST00000541169 SNX11Q9Y5W9 270 aa18.72■□□□□ 0.59
VPS33A-205ENST00000541169 H0Y8X5 98 aa18.71■□□□□ 0.59
VPS33A-205ENST00000541169 H3BM21 787 aa18.71■□□□□ 0.59
VPS33A-205ENST00000541169 STX7O15400 261 aaKnown RBP18.71■□□□□ 0.59
VPS33A-205ENST00000541169 PCDHGA12O60330 932 aa18.71■□□□□ 0.59
VPS33A-205ENST00000541169 PCCBP05166 539 aa18.71■□□□□ 0.59
VPS33A-205ENST00000541169 ZSCAN5DPP0CG00 497 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms