RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 KCNF1Q9H3M0 494 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 WDR26Q9H7D7 661 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 KCTD5Q9NXV2 234 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 APOBEC3BQ9UH17 382 aaKnown RBP9.22□□□□□ -0.93
SNHG1-215ENST00000540904 PNMA8BQ9ULN7 279 aaPredicted RBP9.22□□□□□ -0.93
SNHG1-215ENST00000540904 DNAH14Q0VDD8 3507 aa9.22□□□□□ -0.93
SNHG1-215ENST00000540904 ASCC3Q8N3C0 2202 aaKnown RBP9.21□□□□□ -0.93
SNHG1-215ENST00000540904 DOCK9Q9BZ29 2069 aa9.21□□□□□ -0.93
SNHG1-215ENST00000540904 NEMP2A6NFY4 417 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 TRIM38O00635 465 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 SCAMP1O15126 338 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 AQP9O43315 295 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 TNFSF14O43557 240 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 LDOC1O95751 146 aaPredicted RBP9.21□□□□□ -0.94
SNHG1-215ENST00000540904 ATXN1LP0C7T5 689 aaKnown RBP9.21□□□□□ -0.94
SNHG1-215ENST00000540904 FTH1P19P0C7X4 201 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 TSHRP16473 764 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 PSMB4P28070 264 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 CXCR5P32302 372 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 TRIM23P36406 574 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 CHRNA4P43681 627 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 GPR1P46091 355 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 BLKP51451 505 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 HK3P52790 923 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 SRP54P61011 504 aaKnown RBP9.21□□□□□ -0.94
SNHG1-215ENST00000540904 FOXK2Q01167 660 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 FOXC1Q12948 553 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 C1orf61Q13536 156 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 TCEA2Q15560 299 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 CDKN3Q16667 212 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 ALG11Q2TAA5 492 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 HS1BP3Q53T59 392 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 PRRT3Q5FWE3 981 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 ITPRIPL1Q6GPH6 555 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 KDELC1Q6UW63 502 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 NYAP1Q6ZVC0 841 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 GLRX5Q86SX6 157 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 HEATR4Q86WZ0 1026 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 SLC13A5Q86YT5 568 aaPredicted RBP9.21□□□□□ -0.94
SNHG1-215ENST00000540904 HID1Q8IV36 788 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 PHACTR4Q8IZ21 702 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 SLC25A41Q8N5S1 370 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 PNPLA1Q8N8W4 532 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 ZNF548Q8NEK5 533 aaPredicted RBP9.21□□□□□ -0.94
SNHG1-215ENST00000540904 OR56A4Q8NGH8 313 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 LMX1AQ8TE12 382 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 BTN2A2Q8WVV5 523 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 ATG4AQ8WYN0 398 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 SCAMP4Q969E2 229 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 AP2M1Q96CW1 435 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 CNDP2Q96KP4 475 aaKnown RBP9.21□□□□□ -0.94
SNHG1-215ENST00000540904 WDR92Q96MX6 357 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 SPATA13Q96N96 652 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 TMEM121Q9BTD3 319 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 LRRC61Q9BV99 259 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 GPR63Q9BZJ6 419 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 ABCG8Q9H221 673 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 CARD9Q9H257 536 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 ZFYVE1Q9HBF4 777 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 USP29Q9HBJ7 922 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 MAGEE1Q9HCI5 957 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 TRMT1Q9NXH9 659 aaKnown RBP9.21□□□□□ -0.94
SNHG1-215ENST00000540904 KLQ9UEF7 1012 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 SHOC2Q9UQ13 582 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 APOBEC2Q9Y235 224 aaKnown RBP9.21□□□□□ -0.94
SNHG1-215ENST00000540904 KNL1Q8NG31 2342 aa9.21□□□□□ -0.94
SNHG1-215ENST00000540904 LOC285095A0A1B0GVY8 99 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 C5orf60A6NFR6 353 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 TMEM202A6NGA9 273 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 PDE2AO00408 941 aaPredicted RBP9.2□□□□□ -0.94
SNHG1-215ENST00000540904 ENC1O14682 589 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 ZSCAN12O43309 604 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 SIGLEC6O43699 453 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 LIASO43766 372 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 GCATO75600 419 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 ZNF189O75820 626 aaPredicted RBP9.2□□□□□ -0.94
SNHG1-215ENST00000540904 ANXA9O76027 345 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 RASGRP1O95267 797 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 AGTP01019 485 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 EPOP01588 193 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 HOXC4P09017 264 aaPredicted RBP9.2□□□□□ -0.94
SNHG1-215ENST00000540904 ALPPL2P10696 532 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 MYCLP1P12525 358 aaPredicted RBP9.2□□□□□ -0.94
SNHG1-215ENST00000540904 CTSEP14091 401 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 KELP23276 732 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 SPINT3P49223 89 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 GEMP55040 296 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 GDF10P55107 478 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 KIAA1024LP59773 190 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 CDK3Q00526 305 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 DPTQ07507 201 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 DNAJC3Q13217 504 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 MPP3Q13368 585 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 PRPSAP1Q14558 356 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 GSE1Q14687 1217 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 SLC1A5Q15758 541 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 DEFB133Q30KQ1 61 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 SIRPB2Q5JXA9 342 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 KCTD16Q68DU8 428 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 ARHGEF18Q6ZSZ5 1173 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms