RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 DNPEPQ9ULA0 475 aa16.87■□□□□ 0.29
CD9-209ENST00000540891 APOBEC2Q9Y235 224 aaKnown RBP16.87■□□□□ 0.29
CD9-209ENST00000540891 R3HDM2Q9Y2K5 976 aaKnown RBP16.87■□□□□ 0.29
CD9-209ENST00000540891 TDRD6O60522 2096 aaKnown RBP16.87■□□□□ 0.29
CD9-209ENST00000540891 C1orf232A0A0U1RR37 186 aa16.86■□□□□ 0.29
CD9-209ENST00000540891 LOC285095A0A1B0GVY8 99 aa16.86■□□□□ 0.29
CD9-209ENST00000540891 CACNB4O00305 520 aaPredicted RBP16.86■□□□□ 0.29
CD9-209ENST00000540891 AQP9O43315 295 aa16.86■□□□□ 0.29
CD9-209ENST00000540891 CELA2BP08218 269 aaPredicted RBP16.86■□□□□ 0.29
CD9-209ENST00000540891 TSHRP16473 764 aa16.86■□□□□ 0.29
CD9-209ENST00000540891 HTR1BP28222 390 aa16.86■□□□□ 0.29
CD9-209ENST00000540891 TEAD1P28347 426 aa16.86■□□□□ 0.29
CD9-209ENST00000540891 ACADVLP49748 655 aa16.86■□□□□ 0.29
CD9-209ENST00000540891 HK3P52790 923 aa16.86■□□□□ 0.29
CD9-209ENST00000540891 WNT3AP56704 352 aa16.86■□□□□ 0.29
CD9-209ENST00000540891 C1orf61Q13536 156 aa16.86■□□□□ 0.29
CD9-209ENST00000540891 FAXCQ5TGI0 409 aa16.86■□□□□ 0.29
CD9-209ENST00000540891 MEI1Q5TIA1 1274 aa16.86■□□□□ 0.29
CD9-209ENST00000540891 HEATR4Q86WZ0 1026 aa16.86■□□□□ 0.29
CD9-209ENST00000540891 CDKL3Q8IVW4 592 aaPredicted RBP16.86■□□□□ 0.29
CD9-209ENST00000540891 LMX1AQ8TE12 382 aa16.86■□□□□ 0.29
CD9-209ENST00000540891 OR1E3Q8WZA6 343 aa16.86■□□□□ 0.29
CD9-209ENST00000540891 PDXPQ96GD0 296 aa16.86■□□□□ 0.29
CD9-209ENST00000540891 WDR92Q96MX6 357 aa16.86■□□□□ 0.29
CD9-209ENST00000540891 WDR24Q96S15 920 aa16.86■□□□□ 0.29
CD9-209ENST00000540891 AGAP2Q99490 1192 aa16.86■□□□□ 0.29
CD9-209ENST00000540891 TEX101Q9BY14 249 aa16.86■□□□□ 0.29
CD9-209ENST00000540891 CLPBQ9H078 707 aa16.86■□□□□ 0.29
CD9-209ENST00000540891 WDR26Q9H7D7 661 aa16.86■□□□□ 0.29
CD9-209ENST00000540891 USP29Q9HBJ7 922 aa16.86■□□□□ 0.29
CD9-209ENST00000540891 FGF22Q9HCT0 170 aa16.86■□□□□ 0.29
CD9-209ENST00000540891 NLGN3Q9NZ94 848 aa16.86■□□□□ 0.29
CD9-209ENST00000540891 FAM153AQ9UHL3 310 aa16.86■□□□□ 0.29
CD9-209ENST00000540891 TRHDEQ9UKU6 1024 aa16.86■□□□□ 0.29
CD9-209ENST00000540891 PPP2R2CQ9Y2T4 447 aa16.86■□□□□ 0.29
CD9-209ENST00000540891 CSNK1G3Q9Y6M4 447 aa16.86■□□□□ 0.29
CD9-209ENST00000540891 LRP4O75096 1905 aa16.86■□□□□ 0.29
CD9-209ENST00000540891 LY6G6EA0A0G2JKS1 128 aa16.85■□□□□ 0.29
CD9-209ENST00000540891 TRIM16O95361 564 aa16.85■□□□□ 0.29
CD9-209ENST00000540891 NDST3O95803 873 aa16.85■□□□□ 0.29
CD9-209ENST00000540891 PIRTP0C851 137 aa16.85■□□□□ 0.29
CD9-209ENST00000540891 MYCLP1P12525 358 aaPredicted RBP16.85■□□□□ 0.29
CD9-209ENST00000540891 SRP54P61011 504 aaKnown RBP16.85■□□□□ 0.29
CD9-209ENST00000540891 CDK3Q00526 305 aa16.85■□□□□ 0.29
CD9-209ENST00000540891 PRRT3Q5FWE3 981 aa16.85■□□□□ 0.29
CD9-209ENST00000540891 RAET1GQ6H3X3 334 aa16.85■□□□□ 0.29
CD9-209ENST00000540891 DARS2Q6PI48 645 aaKnown RBP16.85■□□□□ 0.29
CD9-209ENST00000540891 ZNF765Q7L2R6 523 aa16.85■□□□□ 0.29
CD9-209ENST00000540891 LYSMD3Q7Z3D4 306 aa16.85■□□□□ 0.29
CD9-209ENST00000540891 NLRP8Q86W28 1048 aa16.85■□□□□ 0.29
CD9-209ENST00000540891 HID1Q8IV36 788 aa16.85■□□□□ 0.29
CD9-209ENST00000540891 RAVER1Q8IY67 606 aaKnown RBP16.85■□□□□ 0.29
CD9-209ENST00000540891 OR56A4Q8NGH8 313 aa16.85■□□□□ 0.29
CD9-209ENST00000540891 AP2M1Q96CW1 435 aa16.85■□□□□ 0.29
CD9-209ENST00000540891 MRGPRX2Q96LB1 330 aa16.85■□□□□ 0.29
CD9-209ENST00000540891 SCNM1Q9BWG6 230 aa16.85■□□□□ 0.29
CD9-209ENST00000540891 GBA3Q9H227 469 aa16.85■□□□□ 0.29
CD9-209ENST00000540891 MRPL40Q9NQ50 206 aaKnown RBP16.85■□□□□ 0.29
CD9-209ENST00000540891 SPASTQ9UBP0 616 aa16.85■□□□□ 0.29
CD9-209ENST00000540891 KLQ9UEF7 1012 aa16.85■□□□□ 0.29
CD9-209ENST00000540891 RSPH14Q9UHP6 348 aa16.85■□□□□ 0.29
CD9-209ENST00000540891 ANGPTL2Q9UKU9 493 aa16.85■□□□□ 0.29
CD9-209ENST00000540891 SPO11Q9Y5K1 396 aa16.85■□□□□ 0.29
CD9-209ENST00000540891 DGKBQ9Y6T7 804 aa16.85■□□□□ 0.29
CD9-209ENST00000540891 U3KQA8 63 aa16.85■□□□□ 0.29
CD9-209ENST00000540891 NEMP2A6NFY4 417 aa16.84■□□□□ 0.29
CD9-209ENST00000540891 KCNN4O15554 427 aa16.84■□□□□ 0.29
CD9-209ENST00000540891 RASGRP1O95267 797 aa16.84■□□□□ 0.29
CD9-209ENST00000540891 MYF5P13349 255 aa16.84■□□□□ 0.29
CD9-209ENST00000540891 CKMT2P17540 419 aa16.84■□□□□ 0.29
CD9-209ENST00000540891 CHRNA4P43681 627 aa16.84■□□□□ 0.29
CD9-209ENST00000540891 SPINT3P49223 89 aa16.84■□□□□ 0.29
CD9-209ENST00000540891 DEFB133Q30KQ1 61 aa16.84■□□□□ 0.29
CD9-209ENST00000540891 ANKRD20A2Q5SQ80 823 aa16.84■□□□□ 0.29
CD9-209ENST00000540891 ANKRD20A1Q5TYW2 823 aa16.84■□□□□ 0.29
CD9-209ENST00000540891 ANKRD20A3Q5VUR7 823 aa16.84■□□□□ 0.29
CD9-209ENST00000540891 RD3Q7Z3Z2 195 aa16.84■□□□□ 0.29
CD9-209ENST00000540891 NRSN1Q8IZ57 195 aa16.84■□□□□ 0.29
CD9-209ENST00000540891 TTC13Q8NBP0 860 aa16.84■□□□□ 0.29
CD9-209ENST00000540891 ATL2Q8NHH9 583 aa16.84■□□□□ 0.29
CD9-209ENST00000540891 SLC35B2Q8TB61 432 aa16.84■□□□□ 0.29
CD9-209ENST00000540891 PTCD2Q8WV60 388 aaKnown RBP16.84■□□□□ 0.29
CD9-209ENST00000540891 UBE2Q2Q8WVN8 375 aa16.84■□□□□ 0.29
CD9-209ENST00000540891 APOLD1Q96LR9 279 aa16.84■□□□□ 0.29
CD9-209ENST00000540891 RIOK2Q9BVS4 552 aaKnown RBP16.84■□□□□ 0.29
CD9-209ENST00000540891 SLC13A1Q9BZW2 595 aa16.84■□□□□ 0.29
CD9-209ENST00000540891 MAGEE1Q9HCI5 957 aa16.84■□□□□ 0.29
CD9-209ENST00000540891 KLK13Q9UKR3 277 aa16.84■□□□□ 0.29
CD9-209ENST00000540891 SHOC2Q9UQ13 582 aa16.84■□□□□ 0.29
CD9-209ENST00000540891 ZNF711Q9Y462 761 aa16.84■□□□□ 0.29
CD9-209ENST00000540891 PCDHGA1Q9Y5H4 931 aa16.84■□□□□ 0.29
CD9-209ENST00000540891 GOLGA6CA6NDK9 693 aa16.83■□□□□ 0.28
CD9-209ENST00000540891 GOLGA6BA6NDN3 693 aa16.83■□□□□ 0.28
CD9-209ENST00000540891 GOLGA6L9A6NEM1 432 aa16.83■□□□□ 0.28
CD9-209ENST00000540891 TPP1O14773 563 aa16.83■□□□□ 0.28
CD9-209ENST00000540891 TNFRSF10CO14798 259 aa16.83■□□□□ 0.28
CD9-209ENST00000540891 AURKAO14965 403 aa16.83■□□□□ 0.28
CD9-209ENST00000540891 NRDCO43847 1150 aa16.83■□□□□ 0.28
CD9-209ENST00000540891 EPOP01588 193 aa16.83■□□□□ 0.28
CD9-209ENST00000540891 FUCA1P04066 466 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms