RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 YY2O15391 372 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 NKX2-8O15522 239 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 CREB3O43889 395 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 PRPSAP2O60256 369 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 SNAP91O60641 907 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 ZMPSTE24O75844 475 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 CD160O95971 181 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 MT-CO1P00395 513 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 RHOCP08134 193 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 RARAP10276 462 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 IL4RP24394 825 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 EPHB2P29323 1055 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 UGT1A3P35503 534 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 ACVRL1P37023 503 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 MAGEA1P43355 309 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 STK19P49842 368 aaPredicted RBP8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 TAS2R40P59535 323 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 MC1RQ01726 317 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 TCEAL1Q15170 157 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 EIF2S3LQ2VIR3 472 aaKnown RBP8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 CRTC2Q53ET0 693 aaPredicted RBP8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 BOLA3Q53S33 107 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 PRRT3Q5FWE3 981 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 EFHC2Q5JST6 749 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 RWDD4Q6NW29 188 aaKnown RBP8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 LVRNQ6Q4G3 990 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 ASB18Q6ZVZ8 466 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 TMTC1Q8IUR5 882 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 CCDC13Q8IYE1 715 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 SDR16C5Q8N3Y7 309 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 ARL10Q8N8L6 244 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 FRS2Q8WU20 508 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 SCG3Q8WXD2 468 aaKnown RBP8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 CCDC74AQ96AQ1 378 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 TBC1D31Q96DN5 1066 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 EIF3CQ99613 913 aaKnown RBP8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 KLC2Q9H0B6 622 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 DHX35Q9H5Z1 703 aaKnown RBP8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 RETREG1Q9H6L5 497 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 RUBCNLQ9H714 662 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 CWC15Q9P013 229 aaKnown RBP8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 IMPACTQ9P2X3 320 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 INTUQ9ULD6 942 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 AP4E1Q9UPM8 1137 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 REXO2Q9Y3B8 237 aaKnown RBP8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 PCDHGA3Q9Y5H0 932 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 PCDHA13Q9Y5I0 950 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 ACTL7AQ9Y615 435 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 SPG11Q96JI7 2443 aa8.92□□□□□ -0.98
TRAPPC1-202ENST00000540486 HIVEP3Q5T1R4 2406 aa8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 POM121BA6NF01 834 aa8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 K7ERQ8 282 aa8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 MCF2LO15068 1137 aa8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 SMAD6O43541 496 aaKnown RBP8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 ZNF821O75541 412 aaPredicted RBP8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 GCATO75600 419 aa8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 MTA2O94776 668 aa8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 PROSCO94903 275 aa8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 NDUFA10O95299 355 aa8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 VAV1P15498 845 aa8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 HCAR3P49019 387 aa8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 MAPKAPK2P49137 400 aa8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 ARSEP51690 589 aa8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 ARF5P84085 180 aa8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 SLC25A11Q02978 314 aaKnown RBP8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 GNA12Q03113 381 aa8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 SULT2A1Q06520 285 aa8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 CDC20Q12834 499 aa8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 MESDQ14696 234 aa8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 SMTNL2Q2TAL5 461 aa8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 DEFB109BQ30KR1 87 aa8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 PIP5KL1Q5T9C9 394 aa8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 ZNF783Q6ZMS7 281 aa8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 POLNQ7Z5Q5 900 aa8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 PSTKQ8IV42 348 aaKnown RBP8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 CACNA2D3Q8IZS8 1091 aa8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 RTL3Q8N8U3 475 aaKnown RBP8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 FAM71BQ8TC56 605 aa8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 ARHGEF2Q92974 986 aaKnown RBP8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 TAAR9Q96RI9 348 aa8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 PPP1R9BQ96SB3 815 aa8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 NCAPGQ9BPX3 1015 aa8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 SPON2Q9BUD6 331 aa8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 MUC3BQ9H195 1237 aa8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 ZWILCHQ9H900 591 aa8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 GULP1Q9UBP9 304 aa8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 APOBEC3BQ9UH17 382 aaKnown RBP8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 VPS51Q9UID3 782 aa8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 VPS28Q9UK41 221 aa8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 KCTD3Q9Y597 815 aa8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 DOCK9Q9BZ29 2069 aa8.91□□□□□ -0.98
TRAPPC1-202ENST00000540486 SCN8AQ9UQD0 1980 aa8.9□□□□□ -0.98
TRAPPC1-202ENST00000540486 A0A0U1RQJ8 604 aa8.9□□□□□ -0.98
TRAPPC1-202ENST00000540486 FAM187AA6NFU0 413 aa8.9□□□□□ -0.98
TRAPPC1-202ENST00000540486 RNF103O00237 685 aa8.9□□□□□ -0.98
TRAPPC1-202ENST00000540486 EEF2KO00418 725 aaKnown RBP8.9□□□□□ -0.98
TRAPPC1-202ENST00000540486 ATP9BO43861 1147 aa8.9□□□□□ -0.98
TRAPPC1-202ENST00000540486 PCDH8O95206 1070 aa8.9□□□□□ -0.98
TRAPPC1-202ENST00000540486 CD48P09326 243 aa8.9□□□□□ -0.98
TRAPPC1-202ENST00000540486 SRCP12931 536 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms