RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 CDC7O00311 574 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 VILLO15195 856 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 OR1I1O60431 355 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 NRP2O60462 931 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 ADAMTS4O75173 837 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 CLPTM1O96005 669 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 IGHA2P01877 340 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 HSPA1AP0DMV8 641 aaKnown RBP14.05□□□□□ -0.16
UBE3B-210ENST00000539599 HSPA1BP0DMV9 641 aaKnown RBP14.05□□□□□ -0.16
UBE3B-210ENST00000539599 GFAPP14136 432 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 RHOQP17081 205 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 CDH15P55291 814 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 PRKCZQ05513 592 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 AAK1Q2M2I8 961 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 FAM171A1Q5VUB5 890 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 PAQR3Q6TCH7 311 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 IFNL1Q8IU54 200 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 TMIGD2Q96BF3 282 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 UNC93B1Q9H1C4 597 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 ARNT2Q9HBZ2 717 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 TMEM248Q9NWD8 314 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 UTP6Q9NYH9 597 aaKnown RBP14.05□□□□□ -0.16
UBE3B-210ENST00000539599 MAP10Q9P2G4 905 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 CNOT6Q9ULM6 557 aaKnown RBP14.05□□□□□ -0.16
UBE3B-210ENST00000539599 C5orf42Q9H799 3197 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 VWA8A3KMH1 1905 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 A0A0J9YYE9 177 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 CLIC3O95833 236 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 PABPC4LP0CB38 370 aaKnown RBP14.05□□□□□ -0.16
UBE3B-210ENST00000539599 CASP2P42575 452 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 SGSHP51688 502 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 RPS24P62847 133 aaKnown RBP14.05□□□□□ -0.16
UBE3B-210ENST00000539599 MAPRE1Q15691 268 aaKnown RBP14.05□□□□□ -0.16
UBE3B-210ENST00000539599 CTXN3Q4LDR2 81 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 ARMC3Q5W041 872 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 UGT3A1Q6NUS8 523 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 TMEM173Q86WV6 379 aaPredicted RBP14.05□□□□□ -0.16
UBE3B-210ENST00000539599 SPPL2CQ8IUH8 684 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 TWIST2Q8WVJ9 160 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 PRICKLE1Q96MT3 831 aaPredicted RBP14.05□□□□□ -0.16
UBE3B-210ENST00000539599 CDK15Q96Q40 435 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 ACOX2Q99424 681 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 SH3GL3Q99963 347 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 MFSD1Q9H3U5 465 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 LIN28AQ9H9Z2 209 aaKnown RBP14.05□□□□□ -0.16
UBE3B-210ENST00000539599 SLAMF8Q9P0V8 285 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 VPS28Q9UK41 221 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 SCML2Q9UQR0 700 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 NME4O00746 187 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 SOCS2O14508 198 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 DENRO43583 198 aaKnown RBP14.05□□□□□ -0.16
UBE3B-210ENST00000539599 SNUPNO95149 360 aaKnown RBP14.05□□□□□ -0.16
UBE3B-210ENST00000539599 WISP3O95389 354 aaPredicted RBP14.05□□□□□ -0.16
UBE3B-210ENST00000539599 GLP2RO95838 553 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 RBP1P09455 135 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 PCSK6P29122 969 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 SLC6A4P31645 630 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 PLIN5Q00G26 463 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 TSNQ15631 228 aaKnown RBP14.05□□□□□ -0.16
UBE3B-210ENST00000539599 KIAA0408Q6ZU52 694 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 MFN1Q8IWA4 741 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 MPP4Q96JB8 637 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 C1orf50Q9BV19 199 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 EML4Q9HC35 981 aaKnown RBP14.05□□□□□ -0.16
UBE3B-210ENST00000539599 SPAG4Q9NPE6 437 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 CROTQ9UKG9 612 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 PCDHB8Q9UN66 801 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 MED16Q9Y2X0 877 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 CROCCQ5TZA2 2017 aa14.05□□□□□ -0.16
UBE3B-210ENST00000539599 SCN4AP35499 1836 aa14.04□□□□□ -0.16
UBE3B-210ENST00000539599 GOLGA8CPA6NN73 597 aa14.04□□□□□ -0.16
UBE3B-210ENST00000539599 IQCF5A8MTL0 148 aa14.04□□□□□ -0.16
UBE3B-210ENST00000539599 SUPT3HB4E1H0 165 aa14.04□□□□□ -0.16
UBE3B-210ENST00000539599 SUPT3HO75486 399 aa14.04□□□□□ -0.16
UBE3B-210ENST00000539599 MTHFD1P11586 935 aaKnown RBP14.04□□□□□ -0.16
UBE3B-210ENST00000539599 NCK1P16333 377 aa14.04□□□□□ -0.16
UBE3B-210ENST00000539599 ZNF37AP17032 561 aaPredicted RBP14.04□□□□□ -0.16
UBE3B-210ENST00000539599 GPX3P22352 226 aa14.04□□□□□ -0.16
UBE3B-210ENST00000539599 SCNN1BP51168 640 aa14.04□□□□□ -0.16
UBE3B-210ENST00000539599 XIAPP98170 497 aa14.04□□□□□ -0.16
UBE3B-210ENST00000539599 ZNF235Q14590 738 aa14.04□□□□□ -0.16
UBE3B-210ENST00000539599 C18orf21Q32NC0 220 aaPredicted RBP14.04□□□□□ -0.16
UBE3B-210ENST00000539599 FUT11Q495W5 492 aa14.04□□□□□ -0.16
UBE3B-210ENST00000539599 SETMARQ53H47 684 aaPredicted RBP14.04□□□□□ -0.16
UBE3B-210ENST00000539599 RNF19BQ6ZMZ0 732 aa14.04□□□□□ -0.16
UBE3B-210ENST00000539599 PAXIP1Q6ZW49 1069 aaPredicted RBP14.04□□□□□ -0.16
UBE3B-210ENST00000539599 LGI2Q8N0V4 545 aa14.04□□□□□ -0.16
UBE3B-210ENST00000539599 SCML4Q8N228 414 aa14.04□□□□□ -0.16
UBE3B-210ENST00000539599 ZFP28Q8NHY6 868 aa14.04□□□□□ -0.16
UBE3B-210ENST00000539599 CALML6Q8TD86 181 aa14.04□□□□□ -0.16
UBE3B-210ENST00000539599 BHMTQ93088 406 aa14.04□□□□□ -0.16
UBE3B-210ENST00000539599 TUBGCP3Q96CW5 907 aa14.04□□□□□ -0.16
UBE3B-210ENST00000539599 SLC7A4O43246 635 aa14.04□□□□□ -0.16
UBE3B-210ENST00000539599 SRP72O76094 671 aaKnown RBP14.04□□□□□ -0.16
UBE3B-210ENST00000539599 VNN2O95498 520 aa14.04□□□□□ -0.16
UBE3B-210ENST00000539599 GNAO1P09471 354 aa14.04□□□□□ -0.16
UBE3B-210ENST00000539599 RPL17P18621 184 aaKnown RBP14.04□□□□□ -0.16
UBE3B-210ENST00000539599 EEF1DP29692 281 aaKnown RBP14.04□□□□□ -0.16
UBE3B-210ENST00000539599 OXTRP30559 389 aa14.04□□□□□ -0.16
UBE3B-210ENST00000539599 HERVK_113P63132 956 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms