RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 NAF1Q96HR8 494 aaKnown RBP22.18■■□□□ 1.14
SCARB1-206ENST00000539320 ZNF830Q96NB3 372 aaPredicted RBP22.18■■□□□ 1.14
SCARB1-206ENST00000539320 GFM1Q96RP9 751 aaKnown RBP22.18■■□□□ 1.14
SCARB1-206ENST00000539320 TDRD1Q9BXT4 1180 aaKnown RBP22.18■■□□□ 1.14
SCARB1-206ENST00000539320 FRMD8Q9BZ67 464 aaPredicted RBP22.18■■□□□ 1.14
SCARB1-206ENST00000539320 TSPY26PQ9H489 355 aa22.18■■□□□ 1.14
SCARB1-206ENST00000539320 SUDS3Q9H7L9 328 aaPredicted RBP22.18■■□□□ 1.14
SCARB1-206ENST00000539320 ABHD10Q9NUJ1 306 aa22.18■■□□□ 1.14
SCARB1-206ENST00000539320 GOLGA6AQ9NYA3 693 aa22.18■■□□□ 1.14
SCARB1-206ENST00000539320 AHCTF1Q8WYP5 2266 aa22.17■■□□□ 1.14
SCARB1-206ENST00000539320 UNC13CQ8NB66 2214 aa22.17■■□□□ 1.14
SCARB1-206ENST00000539320 CCDC187A0A096LP49 1063 aa22.17■■□□□ 1.14
SCARB1-206ENST00000539320 NOBOXO60393 691 aa22.17■■□□□ 1.14
SCARB1-206ENST00000539320 HLA-DQB2P05538 268 aa22.17■■□□□ 1.14
SCARB1-206ENST00000539320 CA4P22748 312 aa22.17■■□□□ 1.14
SCARB1-206ENST00000539320 CES1P23141 567 aa22.17■■□□□ 1.14
SCARB1-206ENST00000539320 EPHB1P54762 984 aa22.17■■□□□ 1.14
SCARB1-206ENST00000539320 MESDQ14696 234 aa22.17■■□□□ 1.14
SCARB1-206ENST00000539320 C14orf28Q4W4Y0 310 aa22.17■■□□□ 1.14
SCARB1-206ENST00000539320 CERCAMQ5T4B2 595 aa22.17■■□□□ 1.14
SCARB1-206ENST00000539320 LRRC66Q68CR7 880 aa22.17■■□□□ 1.14
SCARB1-206ENST00000539320 OGFOD3Q6PK18 319 aa22.17■■□□□ 1.14
SCARB1-206ENST00000539320 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.17■■□□□ 1.14
SCARB1-206ENST00000539320 CCL4L1Q8NHW4 92 aa22.17■■□□□ 1.14
SCARB1-206ENST00000539320 RAPGEF5Q92565 580 aa22.17■■□□□ 1.14
SCARB1-206ENST00000539320 HDAC11Q96DB2 347 aa22.17■■□□□ 1.14
SCARB1-206ENST00000539320 FCRL3Q96P31 734 aaPredicted RBP22.17■■□□□ 1.14
SCARB1-206ENST00000539320 DNPEPQ9ULA0 475 aa22.17■■□□□ 1.14
SCARB1-206ENST00000539320 SMG1Q96Q15 3661 aaKnown RBP22.16■■□□□ 1.14
SCARB1-206ENST00000539320 A0A0J9YYE9 177 aa22.16■■□□□ 1.14
SCARB1-206ENST00000539320 CAPN8A6NHC0 703 aa22.16■■□□□ 1.14
SCARB1-206ENST00000539320 TRBC1P01850 177 aa22.16■■□□□ 1.14
SCARB1-206ENST00000539320 CEACAM5P06731 702 aa22.16■■□□□ 1.14
SCARB1-206ENST00000539320 CCNB1P14635 433 aa22.16■■□□□ 1.14
SCARB1-206ENST00000539320 ZNF30P17039 623 aa22.16■■□□□ 1.14
SCARB1-206ENST00000539320 KDELR1P24390 212 aa22.16■■□□□ 1.14
SCARB1-206ENST00000539320 MLLT3P42568 568 aaPredicted RBP22.16■■□□□ 1.14
SCARB1-206ENST00000539320 CCL7P80098 99 aa22.16■■□□□ 1.14
SCARB1-206ENST00000539320 TECPR1Q7Z6L1 1165 aa22.16■■□□□ 1.14
SCARB1-206ENST00000539320 B3GNT8Q7Z7M8 397 aa22.16■■□□□ 1.14
SCARB1-206ENST00000539320 CCNJLQ8IV13 435 aa22.16■■□□□ 1.14
SCARB1-206ENST00000539320 CCDC13Q8IYE1 715 aa22.16■■□□□ 1.14
SCARB1-206ENST00000539320 KIAA1524Q8TCG1 905 aa22.16■■□□□ 1.14
SCARB1-206ENST00000539320 KCNE4Q8WWG9 221 aa22.16■■□□□ 1.14
SCARB1-206ENST00000539320 LIN37Q96GY3 246 aaPredicted RBP22.16■■□□□ 1.14
SCARB1-206ENST00000539320 PRR11Q96HE9 360 aaPredicted RBP22.16■■□□□ 1.14
SCARB1-206ENST00000539320 BBC3Q96PG8 261 aaPredicted RBP22.16■■□□□ 1.14
SCARB1-206ENST00000539320 SMIM14Q96QK8 99 aa22.16■■□□□ 1.14
SCARB1-206ENST00000539320 UBL7Q96S82 380 aaPredicted RBP22.16■■□□□ 1.14
SCARB1-206ENST00000539320 LRRN3Q9H3W5 708 aa22.16■■□□□ 1.14
SCARB1-206ENST00000539320 DPEP2Q9H4A9 486 aa22.16■■□□□ 1.14
SCARB1-206ENST00000539320 DTLQ9NZJ0 730 aa22.16■■□□□ 1.14
SCARB1-206ENST00000539320 A0A0U1RQS6 177 aa22.15■■□□□ 1.14
SCARB1-206ENST00000539320 A0A1W2PQM1 296 aa22.15■■□□□ 1.14
SCARB1-206ENST00000539320 LRRD1A4D1F6 860 aa22.15■■□□□ 1.14
SCARB1-206ENST00000539320 PMS2P1A4D2B8 440 aa22.15■■□□□ 1.14
SCARB1-206ENST00000539320 GLB1P16278 677 aa22.15■■□□□ 1.14
SCARB1-206ENST00000539320 GPR1P46091 355 aa22.15■■□□□ 1.14
SCARB1-206ENST00000539320 GNPDA1P46926 289 aa22.15■■□□□ 1.14
SCARB1-206ENST00000539320 DPTQ07507 201 aa22.15■■□□□ 1.14
SCARB1-206ENST00000539320 ILF3Q12906 894 aaKnown RBP eCLIP22.15■■□□□ 1.143e-7■■■■■ 49.1
SCARB1-206ENST00000539320 HLTFQ14527 1009 aaKnown RBP eCLIP22.15■■□□□ 1.14
SCARB1-206ENST00000539320 IHHQ14623 411 aa22.15■■□□□ 1.14
SCARB1-206ENST00000539320 FOXR1Q6PIV2 292 aa22.15■■□□□ 1.14
SCARB1-206ENST00000539320 SFTPA2Q8IWL1 248 aa22.15■■□□□ 1.14
SCARB1-206ENST00000539320 SLC35G2Q8TBE7 412 aa22.15■■□□□ 1.14
SCARB1-206ENST00000539320 ARRDC2Q8TBH0 407 aa22.15■■□□□ 1.14
SCARB1-206ENST00000539320 GPBAR1Q8TDU6 330 aa22.15■■□□□ 1.14
SCARB1-206ENST00000539320 LRRN4Q8WUT4 740 aa22.15■■□□□ 1.14
SCARB1-206ENST00000539320 AP2M1Q96CW1 435 aa22.15■■□□□ 1.14
SCARB1-206ENST00000539320 CCDC42Q96M95 316 aa22.15■■□□□ 1.14
SCARB1-206ENST00000539320 SLC46A1Q96NT5 459 aa22.15■■□□□ 1.14
SCARB1-206ENST00000539320 RNF157Q96PX1 679 aa22.15■■□□□ 1.14
SCARB1-206ENST00000539320 CHP1Q99653 195 aa22.15■■□□□ 1.14
SCARB1-206ENST00000539320 GSDMCQ9BYG8 508 aa22.15■■□□□ 1.14
SCARB1-206ENST00000539320 EPB41L5Q9HCM4 733 aa22.15■■□□□ 1.14
SCARB1-206ENST00000539320 SPTLC3Q9NUV7 552 aa22.15■■□□□ 1.14
SCARB1-206ENST00000539320 TRNAU1APQ9NX07 287 aaKnown RBP22.15■■□□□ 1.14
SCARB1-206ENST00000539320 CD84Q9UIB8 345 aa22.15■■□□□ 1.14
SCARB1-206ENST00000539320 APPL1Q9UKG1 709 aa22.15■■□□□ 1.14
SCARB1-206ENST00000539320 SUFUQ9UMX1 484 aa22.15■■□□□ 1.14
SCARB1-206ENST00000539320 CHKBQ9Y259 395 aa22.15■■□□□ 1.14
SCARB1-206ENST00000539320 ZNF487B1APH4 448 aa22.14■■□□□ 1.13
SCARB1-206ENST00000539320 SOD1P00441 154 aa22.14■■□□□ 1.13
SCARB1-206ENST00000539320 STC1P52823 247 aa22.14■■□□□ 1.13
SCARB1-206ENST00000539320 NIPAL4Q0D2K0 466 aa22.14■■□□□ 1.13
SCARB1-206ENST00000539320 SLC10A2Q12908 348 aaPredicted RBP22.14■■□□□ 1.13
SCARB1-206ENST00000539320 DOK6Q6PKX4 331 aa22.14■■□□□ 1.13
SCARB1-206ENST00000539320 ADAMTSL4Q6UY14 1074 aa22.14■■□□□ 1.13
SCARB1-206ENST00000539320 RFLNAQ6ZTI6 216 aa22.14■■□□□ 1.13
SCARB1-206ENST00000539320 ZNF765Q7L2R6 523 aa22.14■■□□□ 1.13
SCARB1-206ENST00000539320 SPRED1Q7Z699 444 aa22.14■■□□□ 1.13
SCARB1-206ENST00000539320 RHOT2Q8IXI1 618 aa22.14■■□□□ 1.13
SCARB1-206ENST00000539320 ARL14Q8N4G2 192 aa22.14■■□□□ 1.13
SCARB1-206ENST00000539320 Q8N9G6 341 aaPredicted RBP22.14■■□□□ 1.13
SCARB1-206ENST00000539320 RNF214Q8ND24 703 aa22.14■■□□□ 1.13
SCARB1-206ENST00000539320 CCNYQ8ND76 341 aa22.14■■□□□ 1.13
SCARB1-206ENST00000539320 LPCAT1Q8NF37 534 aa22.14■■□□□ 1.13
SCARB1-206ENST00000539320 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.14■■□□□ 1.13
SCARB1-206ENST00000539320 STRADBQ9C0K7 418 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms