RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 CYP2A6P11509 494 aaPredicted RBP12.5□□□□□ -0.41
VAMP1-206ENST00000538970 ITIH1P19827 911 aa12.5□□□□□ -0.41
VAMP1-206ENST00000538970 NFKBIAP25963 317 aa12.5□□□□□ -0.41
VAMP1-206ENST00000538970 TEAD1P28347 426 aa12.5□□□□□ -0.41
VAMP1-206ENST00000538970 SERPINB6P35237 376 aa12.5□□□□□ -0.41
VAMP1-206ENST00000538970 MMP13P45452 471 aa12.5□□□□□ -0.41
VAMP1-206ENST00000538970 CDH6P55285 790 aa12.5□□□□□ -0.41
VAMP1-206ENST00000538970 MAZP56270 477 aaKnown RBP12.5□□□□□ -0.41
VAMP1-206ENST00000538970 CDK3Q00526 305 aa12.5□□□□□ -0.41
VAMP1-206ENST00000538970 B4GALNT1Q00973 533 aa12.5□□□□□ -0.41
VAMP1-206ENST00000538970 SLC25A11Q02978 314 aaKnown RBP12.5□□□□□ -0.41
VAMP1-206ENST00000538970 ILF3Q12906 894 aaKnown RBP eCLIP12.5□□□□□ -0.41
VAMP1-206ENST00000538970 ARHGEF7Q14155 803 aa12.5□□□□□ -0.41
VAMP1-206ENST00000538970 PIGHQ14442 188 aaPredicted RBP12.5□□□□□ -0.41
VAMP1-206ENST00000538970 TGIF1Q15583 401 aa12.5□□□□□ -0.41
VAMP1-206ENST00000538970 MAP9Q49MG5 647 aa12.5□□□□□ -0.41
VAMP1-206ENST00000538970 FIGNQ5HY92 759 aa12.5□□□□□ -0.41
VAMP1-206ENST00000538970 HGSNATQ68CP4 663 aa12.5□□□□□ -0.41
VAMP1-206ENST00000538970 DENND2CQ68D51 928 aa12.5□□□□□ -0.41
VAMP1-206ENST00000538970 ZNF438Q7Z4V0 828 aa12.5□□□□□ -0.41
VAMP1-206ENST00000538970 NIPA2Q8N8Q9 360 aa12.5□□□□□ -0.41
VAMP1-206ENST00000538970 TEKT4Q8WW24 435 aa12.5□□□□□ -0.41
VAMP1-206ENST00000538970 SCRN2Q96FV2 425 aa12.5□□□□□ -0.41
VAMP1-206ENST00000538970 GSDMCQ9BYG8 508 aa12.5□□□□□ -0.41
VAMP1-206ENST00000538970 SUDS3Q9H7L9 328 aaPredicted RBP12.5□□□□□ -0.41
VAMP1-206ENST00000538970 SPATS2LQ9NUQ6 558 aaKnown RBP12.5□□□□□ -0.41
VAMP1-206ENST00000538970 TRNAU1APQ9NX07 287 aaKnown RBP12.5□□□□□ -0.41
VAMP1-206ENST00000538970 PHTF1Q9UMS5 762 aa12.5□□□□□ -0.41
VAMP1-206ENST00000538970 SLC17A4Q9Y2C5 497 aa12.5□□□□□ -0.41
VAMP1-206ENST00000538970 COL6A6A6NMZ7 2263 aa12.5□□□□□ -0.41
VAMP1-206ENST00000538970 SPTA1P02549 2419 aa12.5□□□□□ -0.41
VAMP1-206ENST00000538970 PTPN13Q12923 2485 aa12.49□□□□□ -0.41
VAMP1-206ENST00000538970 PRAMEF33A0A0G2JMD5 474 aa12.49□□□□□ -0.41
VAMP1-206ENST00000538970 PRAMEF10O60809 474 aa12.49□□□□□ -0.41
VAMP1-206ENST00000538970 FGF1P05230 155 aa12.49□□□□□ -0.41
VAMP1-206ENST00000538970 ETV5P41161 510 aa12.49□□□□□ -0.41
VAMP1-206ENST00000538970 GNPDA1P46926 289 aa12.49□□□□□ -0.41
VAMP1-206ENST00000538970 ZNF165P49910 485 aa12.49□□□□□ -0.41
VAMP1-206ENST00000538970 SRSF6Q13247 344 aaKnown RBP12.49□□□□□ -0.41
VAMP1-206ENST00000538970 NR1I3Q14994 352 aa12.49□□□□□ -0.41
VAMP1-206ENST00000538970 NR1D2Q14995 579 aa12.49□□□□□ -0.41
VAMP1-206ENST00000538970 PTPRRQ15256 657 aa12.49□□□□□ -0.41
VAMP1-206ENST00000538970 TDRD12Q587J7 1177 aaKnown RBP12.49□□□□□ -0.41
VAMP1-206ENST00000538970 COLEC12Q5KU26 742 aa12.49□□□□□ -0.41
VAMP1-206ENST00000538970 ARMC12Q5T9G4 340 aa12.49□□□□□ -0.41
VAMP1-206ENST00000538970 MARC1Q5VT66 337 aa12.49□□□□□ -0.41
VAMP1-206ENST00000538970 RAET1GQ6H3X3 334 aa12.49□□□□□ -0.41
VAMP1-206ENST00000538970 Q6ZVL8 140 aa12.49□□□□□ -0.41
VAMP1-206ENST00000538970 USP45Q70EL2 814 aa12.49□□□□□ -0.41
VAMP1-206ENST00000538970 TSPAN33Q86UF1 283 aa12.49□□□□□ -0.41
VAMP1-206ENST00000538970 ZDHHC1Q8WTX9 485 aa12.49□□□□□ -0.41
VAMP1-206ENST00000538970 NSMCE1Q8WV22 266 aa12.49□□□□□ -0.41
VAMP1-206ENST00000538970 MED8Q96G25 268 aa12.49□□□□□ -0.41
VAMP1-206ENST00000538970 CMKLR1Q99788 373 aa12.49□□□□□ -0.41
VAMP1-206ENST00000538970 THAP2Q9H0W7 228 aa12.49□□□□□ -0.41
VAMP1-206ENST00000538970 SEMA6CQ9H3T2 930 aa12.49□□□□□ -0.41
VAMP1-206ENST00000538970 FOXJ2Q9P0K8 574 aa12.49□□□□□ -0.41
VAMP1-206ENST00000538970 TAAR2Q9P1P5 351 aa12.49□□□□□ -0.41
VAMP1-206ENST00000538970 SUFUQ9UMX1 484 aa12.49□□□□□ -0.41
VAMP1-206ENST00000538970 PPIL1Q9Y3C6 166 aa12.49□□□□□ -0.41
VAMP1-206ENST00000538970 ST14Q9Y5Y6 855 aa12.49□□□□□ -0.41
VAMP1-206ENST00000538970 UBR5O95071 2799 aaPredicted RBP12.49□□□□□ -0.41
VAMP1-206ENST00000538970 GOLGA6CA6NDK9 693 aa12.48□□□□□ -0.41
VAMP1-206ENST00000538970 GOLGA6BA6NDN3 693 aa12.48□□□□□ -0.41
VAMP1-206ENST00000538970 AGRPO00253 132 aa12.48□□□□□ -0.41
VAMP1-206ENST00000538970 B4GAT1O43505 415 aa12.48□□□□□ -0.41
VAMP1-206ENST00000538970 FZD6O60353 706 aa12.48□□□□□ -0.41
VAMP1-206ENST00000538970 CPNE6O95741 557 aa12.48□□□□□ -0.41
VAMP1-206ENST00000538970 SOD1P00441 154 aa12.48□□□□□ -0.41
VAMP1-206ENST00000538970 IVLP07476 585 aa12.48□□□□□ -0.41
VAMP1-206ENST00000538970 GOLGA6DP0CG33 693 aa12.48□□□□□ -0.41
VAMP1-206ENST00000538970 CTPS1P17812 591 aa12.48□□□□□ -0.41
VAMP1-206ENST00000538970 IL4RP24394 825 aa12.48□□□□□ -0.41
VAMP1-206ENST00000538970 AK4P27144 223 aaPredicted RBP12.48□□□□□ -0.41
VAMP1-206ENST00000538970 CSRP3P50461 194 aa12.48□□□□□ -0.41
VAMP1-206ENST00000538970 DPTQ07507 201 aa12.48□□□□□ -0.41
VAMP1-206ENST00000538970 C16orf72Q14CZ0 275 aa12.48□□□□□ -0.41
VAMP1-206ENST00000538970 IQCB1Q15051 598 aa12.48□□□□□ -0.41
VAMP1-206ENST00000538970 PHF19Q5T6S3 580 aa12.48□□□□□ -0.41
VAMP1-206ENST00000538970 PRICKLE2Q7Z3G6 844 aa12.48□□□□□ -0.41
VAMP1-206ENST00000538970 TECPR1Q7Z6L1 1165 aa12.48□□□□□ -0.41
VAMP1-206ENST00000538970 TEX26Q8N6G2 289 aa12.48□□□□□ -0.41
VAMP1-206ENST00000538970 FAM71BQ8TC56 605 aa12.48□□□□□ -0.41
VAMP1-206ENST00000538970 PIH1D2Q8WWB5 315 aa12.48□□□□□ -0.41
VAMP1-206ENST00000538970 BTBD6Q96KE9 485 aa12.48□□□□□ -0.41
VAMP1-206ENST00000538970 NUDT22Q9BRQ3 303 aa12.48□□□□□ -0.41
VAMP1-206ENST00000538970 RDH14Q9HBH5 336 aa12.48□□□□□ -0.41
VAMP1-206ENST00000538970 NT5MQ9NPB1 228 aa12.48□□□□□ -0.41
VAMP1-206ENST00000538970 WDR70Q9NW82 654 aa12.48□□□□□ -0.41
VAMP1-206ENST00000538970 GOLGA6AQ9NYA3 693 aa12.48□□□□□ -0.41
VAMP1-206ENST00000538970 RCOR3Q9P2K3 495 aaPredicted RBP12.48□□□□□ -0.41
VAMP1-206ENST00000538970 IP6K2Q9UHH9 426 aa12.48□□□□□ -0.41
VAMP1-206ENST00000538970 ANAPC7Q9UJX3 599 aa12.48□□□□□ -0.41
VAMP1-206ENST00000538970 SCN8AQ9UQD0 1980 aa12.48□□□□□ -0.41
VAMP1-206ENST00000538970 A0A0U1RQS6 177 aa12.47□□□□□ -0.41
VAMP1-206ENST00000538970 A0A1W2PQJ5 194 aa12.47□□□□□ -0.41
VAMP1-206ENST00000538970 RHPN2P1A8MT19 583 aa12.47□□□□□ -0.41
VAMP1-206ENST00000538970 C9orf172C9J069 976 aa12.47□□□□□ -0.41
VAMP1-206ENST00000538970 MFSD11O43934 449 aa12.47□□□□□ -0.41
VAMP1-206ENST00000538970 ECEL1O95672 775 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms