RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 ABCG1P45844 678 aa14.95□□□□□ -0.02
RAB40B-202ENST00000538809 NIPAL4Q0D2K0 466 aa14.95□□□□□ -0.02
RAB40B-202ENST00000538809 TAZQ16635 292 aa14.95□□□□□ -0.02
RAB40B-202ENST00000538809 TBC1D25Q3MII6 688 aa14.95□□□□□ -0.02
RAB40B-202ENST00000538809 LRRC66Q68CR7 880 aa14.95□□□□□ -0.02
RAB40B-202ENST00000538809 LVRNQ6Q4G3 990 aa14.95□□□□□ -0.02
RAB40B-202ENST00000538809 NPNTQ6UXI9 565 aa14.95□□□□□ -0.02
RAB40B-202ENST00000538809 RBM44Q6ZP01 1051 aaKnown RBP14.95□□□□□ -0.02
RAB40B-202ENST00000538809 TAF8Q7Z7C8 310 aa14.95□□□□□ -0.02
RAB40B-202ENST00000538809 CCDC13Q8IYE1 715 aa14.95□□□□□ -0.02
RAB40B-202ENST00000538809 CCDC170Q8IYT3 715 aa14.95□□□□□ -0.02
RAB40B-202ENST00000538809 LPCAT1Q8NF37 534 aa14.95□□□□□ -0.02
RAB40B-202ENST00000538809 SNIP1Q8TAD8 396 aaKnown RBP14.95□□□□□ -0.02
RAB40B-202ENST00000538809 ARRDC2Q8TBH0 407 aa14.95□□□□□ -0.02
RAB40B-202ENST00000538809 PTCD2Q8WV60 388 aaKnown RBP14.95□□□□□ -0.02
RAB40B-202ENST00000538809 ATXN7L3BQ96GX2 97 aa14.95□□□□□ -0.02
RAB40B-202ENST00000538809 ZNF830Q96NB3 372 aaPredicted RBP14.95□□□□□ -0.02
RAB40B-202ENST00000538809 LGMNQ99538 433 aa14.95□□□□□ -0.02
RAB40B-202ENST00000538809 TDRD1Q9BXT4 1180 aaKnown RBP14.95□□□□□ -0.02
RAB40B-202ENST00000538809 SATB2Q9UPW6 733 aa14.95□□□□□ -0.02
RAB40B-202ENST00000538809 HEY1Q9Y5J3 304 aa14.95□□□□□ -0.02
RAB40B-202ENST00000538809 ENTPD2Q9Y5L3 495 aa14.95□□□□□ -0.02
RAB40B-202ENST00000538809 LOC400499M0QZD8 3231 aa14.94□□□□□ -0.02
RAB40B-202ENST00000538809 A0A0J9YYE9 177 aa14.94□□□□□ -0.02
RAB40B-202ENST00000538809 A0A1W2PNU3 283 aaPredicted RBP14.94□□□□□ -0.02
RAB40B-202ENST00000538809 PMS2P1A4D2B8 440 aa14.94□□□□□ -0.02
RAB40B-202ENST00000538809 CAPN8A6NHC0 703 aa14.94□□□□□ -0.02
RAB40B-202ENST00000538809 KCNK1O00180 336 aa14.94□□□□□ -0.02
RAB40B-202ENST00000538809 TNFRSF10CO14798 259 aa14.94□□□□□ -0.02
RAB40B-202ENST00000538809 TRBC1P01850 177 aa14.94□□□□□ -0.02
RAB40B-202ENST00000538809 HOXC4P09017 264 aaPredicted RBP14.94□□□□□ -0.02
RAB40B-202ENST00000538809 MX2P20592 715 aa14.94□□□□□ -0.02
RAB40B-202ENST00000538809 COMTP21964 271 aa14.94□□□□□ -0.02
RAB40B-202ENST00000538809 ACTN2P35609 894 aa14.94□□□□□ -0.02
RAB40B-202ENST00000538809 PDX1P52945 283 aa14.94□□□□□ -0.02
RAB40B-202ENST00000538809 CDK3Q00526 305 aa14.94□□□□□ -0.02
RAB40B-202ENST00000538809 PPIDQ08752 370 aaKnown RBP14.94□□□□□ -0.02
RAB40B-202ENST00000538809 CCDC173Q0VFZ6 552 aa14.94□□□□□ -0.02
RAB40B-202ENST00000538809 ZBTB17Q13105 803 aa14.94□□□□□ -0.02
RAB40B-202ENST00000538809 SPIDRQ14159 915 aa14.94□□□□□ -0.02
RAB40B-202ENST00000538809 DOK6Q6PKX4 331 aa14.94□□□□□ -0.02
RAB40B-202ENST00000538809 RFX6Q8HWS3 928 aa14.94□□□□□ -0.02
RAB40B-202ENST00000538809 RHOT1Q8IXI2 618 aa14.94□□□□□ -0.02
RAB40B-202ENST00000538809 SDR16C5Q8N3Y7 309 aa14.94□□□□□ -0.02
RAB40B-202ENST00000538809 FAM46DQ8NEK8 389 aa14.94□□□□□ -0.02
RAB40B-202ENST00000538809 TPCN2Q8NHX9 752 aa14.94□□□□□ -0.02
RAB40B-202ENST00000538809 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.94□□□□□ -0.02
RAB40B-202ENST00000538809 RNF25Q96BH1 459 aaPredicted RBP14.94□□□□□ -0.02
RAB40B-202ENST00000538809 OLFM3Q96PB7 478 aa14.94□□□□□ -0.02
RAB40B-202ENST00000538809 PANX2Q96RD6 677 aa14.94□□□□□ -0.02
RAB40B-202ENST00000538809 TEX101Q9BY14 249 aa14.94□□□□□ -0.02
RAB40B-202ENST00000538809 CEP41Q9BYV8 373 aa14.94□□□□□ -0.02
RAB40B-202ENST00000538809 CARS2Q9HA77 564 aaKnown RBP14.94□□□□□ -0.02
RAB40B-202ENST00000538809 TFR2Q9UP52 801 aa14.94□□□□□ -0.02
RAB40B-202ENST00000538809 IGSF10Q6WRI0 2623 aa14.93□□□□□ -0.02
RAB40B-202ENST00000538809 A0A0A6YYK5 440 aaPredicted RBP14.93□□□□□ -0.02
RAB40B-202ENST00000538809 PDE2AO00408 941 aaPredicted RBP14.93□□□□□ -0.02
RAB40B-202ENST00000538809 APOL1O14791 398 aa14.93□□□□□ -0.02
RAB40B-202ENST00000538809 TCEA3O75764 348 aa14.93□□□□□ -0.02
RAB40B-202ENST00000538809 SOD1P00441 154 aa14.93□□□□□ -0.02
RAB40B-202ENST00000538809 PRLP01236 227 aa14.93□□□□□ -0.02
RAB40B-202ENST00000538809 JCHAINP01591 159 aa14.93□□□□□ -0.02
RAB40B-202ENST00000538809 CEACAM5P06731 702 aa14.93□□□□□ -0.02
RAB40B-202ENST00000538809 CD86P42081 329 aa14.93□□□□□ -0.02
RAB40B-202ENST00000538809 GNPDA1P46926 289 aa14.93□□□□□ -0.02
RAB40B-202ENST00000538809 DYNLT1P63172 113 aa14.93□□□□□ -0.02
RAB40B-202ENST00000538809 FOXR1Q6PIV2 292 aa14.93□□□□□ -0.02
RAB40B-202ENST00000538809 MFSD7Q6UXD7 560 aa14.93□□□□□ -0.02
RAB40B-202ENST00000538809 LRRC69Q6ZNQ3 347 aa14.93□□□□□ -0.02
RAB40B-202ENST00000538809 B4GALNT4Q76KP1 1039 aa14.93□□□□□ -0.02
RAB40B-202ENST00000538809 TECPR1Q7Z6L1 1165 aa14.93□□□□□ -0.02
RAB40B-202ENST00000538809 TRIM74Q86UV6 250 aa14.93□□□□□ -0.02
RAB40B-202ENST00000538809 NDUFAF2Q8N183 169 aa14.93□□□□□ -0.02
RAB40B-202ENST00000538809 GPR156Q8NFN8 814 aa14.93□□□□□ -0.02
RAB40B-202ENST00000538809 FGF11Q92914 225 aa14.93□□□□□ -0.02
RAB40B-202ENST00000538809 SCAMP4Q969E2 229 aa14.93□□□□□ -0.02
RAB40B-202ENST00000538809 AP2M1Q96CW1 435 aa14.93□□□□□ -0.02
RAB40B-202ENST00000538809 NAF1Q96HR8 494 aaKnown RBP14.93□□□□□ -0.02
RAB40B-202ENST00000538809 FRMD8Q9BZ67 464 aaPredicted RBP14.93□□□□□ -0.02
RAB40B-202ENST00000538809 ABCG8Q9H221 673 aa14.93□□□□□ -0.02
RAB40B-202ENST00000538809 GOLPH3Q9H4A6 298 aa14.93□□□□□ -0.02
RAB40B-202ENST00000538809 POLR1BQ9H9Y6 1135 aa14.93□□□□□ -0.02
RAB40B-202ENST00000538809 PCDH9Q9HC56 1237 aa14.93□□□□□ -0.02
RAB40B-202ENST00000538809 HAUS2Q9NVX0 235 aa14.93□□□□□ -0.02
RAB40B-202ENST00000538809 KCTD5Q9NXV2 234 aa14.93□□□□□ -0.02
RAB40B-202ENST00000538809 DDX56Q9NY93 547 aaKnown RBP14.93□□□□□ -0.02
RAB40B-202ENST00000538809 PCDHA13Q9Y5I0 950 aa14.93□□□□□ -0.02
RAB40B-202ENST00000538809 ALG6Q9Y672 507 aa14.93□□□□□ -0.02
RAB40B-202ENST00000538809 RCCD1A6NED2 376 aa14.92□□□□□ -0.02
RAB40B-202ENST00000538809 SOWAHDA6NJG2 315 aa14.92□□□□□ -0.02
RAB40B-202ENST00000538809 NTN3O00634 580 aaPredicted RBP14.92□□□□□ -0.02
RAB40B-202ENST00000538809 RRP8O43159 456 aaKnown RBP14.92□□□□□ -0.02
RAB40B-202ENST00000538809 PSTPIP1O43586 416 aa14.92□□□□□ -0.02
RAB40B-202ENST00000538809 SPOPO43791 374 aa14.92□□□□□ -0.02
RAB40B-202ENST00000538809 NOBOXO60393 691 aa14.92□□□□□ -0.02
RAB40B-202ENST00000538809 FUCA1P04066 466 aa14.92□□□□□ -0.02
RAB40B-202ENST00000538809 RPLP0P05388 317 aaKnown RBP14.92□□□□□ -0.02
RAB40B-202ENST00000538809 MMP2P08253 660 aa14.92□□□□□ -0.02
RAB40B-202ENST00000538809 KRT10P13645 584 aa14.92□□□□□ -0.02
RAB40B-202ENST00000538809 CA4P22748 312 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms