RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 CFAP157Q5JU67 520 aa20.38■□□□□ 0.85
DDX55-205ENST00000538744 CYB5D1Q6P9G0 228 aa20.38■□□□□ 0.85
DDX55-205ENST00000538744 TMEM207Q6UWW9 146 aa20.38■□□□□ 0.85
DDX55-205ENST00000538744 MAVSQ7Z434 540 aa20.38■□□□□ 0.85
DDX55-205ENST00000538744 ZNF557Q8N988 423 aaPredicted RBP20.38■□□□□ 0.85
DDX55-205ENST00000538744 TXNDC5Q8NBS9 432 aaKnown RBP20.38■□□□□ 0.85
DDX55-205ENST00000538744 SLC7A6OSQ96CW6 309 aaPredicted RBP20.38■□□□□ 0.85
DDX55-205ENST00000538744 SGF29Q96ES7 293 aa20.38■□□□□ 0.85
DDX55-205ENST00000538744 PTCD3Q96EY7 689 aaKnown RBP20.38■□□□□ 0.85
DDX55-205ENST00000538744 RAB3IPQ96QF0 476 aaPredicted RBP20.38■□□□□ 0.85
DDX55-205ENST00000538744 GPR63Q9BZJ6 419 aa20.38■□□□□ 0.85
DDX55-205ENST00000538744 CCDC68Q9H2F9 335 aa20.38■□□□□ 0.85
DDX55-205ENST00000538744 TRAFD1O14545 582 aaPredicted RBP20.37■□□□□ 0.85
DDX55-205ENST00000538744 ZNF195O14628 629 aa20.37■□□□□ 0.85
DDX55-205ENST00000538744 NPHS1O60500 1241 aa20.37■□□□□ 0.85
DDX55-205ENST00000538744 PIGNO95427 931 aa20.37■□□□□ 0.85
DDX55-205ENST00000538744 PRAMEF12O95522 483 aa20.37■□□□□ 0.85
DDX55-205ENST00000538744 SERPINA6P08185 405 aa20.37■□□□□ 0.85
DDX55-205ENST00000538744 POU2F2P09086 479 aa20.37■□□□□ 0.85
DDX55-205ENST00000538744 SRCP12931 536 aa20.37■□□□□ 0.85
DDX55-205ENST00000538744 CTPS1P17812 591 aa20.37■□□□□ 0.85
DDX55-205ENST00000538744 TTPAP49638 278 aa20.37■□□□□ 0.85
DDX55-205ENST00000538744 IDH3AP50213 366 aa20.37■□□□□ 0.85
DDX55-205ENST00000538744 SNRPD1P62314 119 aaKnown RBP20.37■□□□□ 0.85
DDX55-205ENST00000538744 USP4Q13107 963 aa20.37■□□□□ 0.85
DDX55-205ENST00000538744 TUBB3Q13509 450 aa20.37■□□□□ 0.85
DDX55-205ENST00000538744 PTPRRQ15256 657 aa20.37■□□□□ 0.85
DDX55-205ENST00000538744 TBCCQ15814 346 aa20.37■□□□□ 0.85
DDX55-205ENST00000538744 FUT11Q495W5 492 aa20.37■□□□□ 0.85
DDX55-205ENST00000538744 AARS2Q5JTZ9 985 aaKnown RBP20.37■□□□□ 0.85
DDX55-205ENST00000538744 GRASPQ7Z6J2 395 aaPredicted RBP20.37■□□□□ 0.85
DDX55-205ENST00000538744 PAF1Q8N7H5 531 aa20.37■□□□□ 0.85
DDX55-205ENST00000538744 OR2AP1Q8NGE2 309 aa20.37■□□□□ 0.85
DDX55-205ENST00000538744 IRF7Q92985 503 aa20.37■□□□□ 0.85
DDX55-205ENST00000538744 ISG20Q96AZ6 181 aaKnown RBP20.37■□□□□ 0.85
DDX55-205ENST00000538744 BBS2Q9BXC9 721 aa20.37■□□□□ 0.85
DDX55-205ENST00000538744 TNKS2Q9H2K2 1166 aa20.37■□□□□ 0.85
DDX55-205ENST00000538744 POMKQ9H5K3 350 aa20.37■□□□□ 0.85
DDX55-205ENST00000538744 BPIFA1Q9NP55 256 aa20.37■□□□□ 0.85
DDX55-205ENST00000538744 KLC4Q9NSK0 619 aa20.37■□□□□ 0.85
DDX55-205ENST00000538744 IL17CQ9P0M4 197 aa20.37■□□□□ 0.85
DDX55-205ENST00000538744 SLC25A13Q9UJS0 675 aa20.37■□□□□ 0.85
DDX55-205ENST00000538744 SORCS3Q9UPU3 1222 aa20.37■□□□□ 0.85
DDX55-205ENST00000538744 HS3ST2Q9Y278 367 aa20.37■□□□□ 0.85
DDX55-205ENST00000538744 MYOFQ9NZM1 2061 aa20.37■□□□□ 0.85
DDX55-205ENST00000538744 NEDD8-MDP1E9PL57 170 aa20.36■□□□□ 0.85
DDX55-205ENST00000538744 ZNF197O14709 1029 aa20.36■□□□□ 0.85
DDX55-205ENST00000538744 ZNF821O75541 412 aaPredicted RBP20.36■□□□□ 0.85
DDX55-205ENST00000538744 SNUPNO95149 360 aaKnown RBP20.36■□□□□ 0.85
DDX55-205ENST00000538744 CHRNGP07510 517 aa20.36■□□□□ 0.85
DDX55-205ENST00000538744 KRT16P08779 473 aa20.36■□□□□ 0.85
DDX55-205ENST00000538744 TCF3P15923 654 aa20.36■□□□□ 0.85
DDX55-205ENST00000538744 TFEBP19484 476 aa20.36■□□□□ 0.85
DDX55-205ENST00000538744 CALB2P22676 271 aa20.36■□□□□ 0.85
DDX55-205ENST00000538744 PTPN4P29074 926 aa20.36■□□□□ 0.85
DDX55-205ENST00000538744 SERPINA4P29622 427 aa20.36■□□□□ 0.85
DDX55-205ENST00000538744 HMGCLP35914 325 aa20.36■□□□□ 0.85
DDX55-205ENST00000538744 CTSOP43234 321 aaPredicted RBP20.36■□□□□ 0.85
DDX55-205ENST00000538744 TIAL1Q01085 375 aaKnown RBP eCLIP20.36■□□□□ 0.85
DDX55-205ENST00000538744 PRKAA1Q13131 559 aa20.36■□□□□ 0.85
DDX55-205ENST00000538744 PDAP1Q13442 181 aaKnown RBP20.36■□□□□ 0.85
DDX55-205ENST00000538744 ARL13AQ5H913 290 aaPredicted RBP20.36■□□□□ 0.85
DDX55-205ENST00000538744 DGKKQ5KSL6 1271 aa20.36■□□□□ 0.85
DDX55-205ENST00000538744 ELMSAN1Q6PJG2 1045 aa20.36■□□□□ 0.85
DDX55-205ENST00000538744 LYSMD3Q7Z3D4 306 aa20.36■□□□□ 0.85
DDX55-205ENST00000538744 PIWIL4Q7Z3Z4 852 aaKnown RBP20.36■□□□□ 0.85
DDX55-205ENST00000538744 PACS2Q86VP3 889 aa20.36■□□□□ 0.85
DDX55-205ENST00000538744 RYBPQ8N488 228 aaPredicted RBP20.36■□□□□ 0.85
DDX55-205ENST00000538744 RPL10LQ96L21 214 aaKnown RBP20.36■□□□□ 0.85
DDX55-205ENST00000538744 SPHK2Q9NRA0 654 aa20.36■□□□□ 0.85
DDX55-205ENST00000538744 ARMCX1Q9P291 453 aa20.36■□□□□ 0.85
DDX55-205ENST00000538744 F8W8V4 182 aa20.36■□□□□ 0.85
DDX55-205ENST00000538744 SRP72O76094 671 aaKnown RBP20.36■□□□□ 0.85
DDX55-205ENST00000538744 RHOBTB1O94844 696 aa20.36■□□□□ 0.85
DDX55-205ENST00000538744 MPSTP25325 297 aa20.36■□□□□ 0.85
DDX55-205ENST00000538744 FMO4P31512 558 aa20.36■□□□□ 0.85
DDX55-205ENST00000538744 SERPINB5P36952 375 aa20.36■□□□□ 0.85
DDX55-205ENST00000538744 STK19P49842 368 aaPredicted RBP20.36■□□□□ 0.85
DDX55-205ENST00000538744 ALDH18A1P54886 795 aaKnown RBP20.36■□□□□ 0.85
DDX55-205ENST00000538744 PEX6Q13608 980 aa20.36■□□□□ 0.85
DDX55-205ENST00000538744 ZRANB3Q5FWF4 1079 aa20.36■□□□□ 0.85
DDX55-205ENST00000538744 ZNF697Q5TEC3 545 aa20.36■□□□□ 0.85
DDX55-205ENST00000538744 PSAPL1Q6NUJ1 521 aa20.36■□□□□ 0.85
DDX55-205ENST00000538744 CCNYL1Q8N7R7 359 aa20.36■□□□□ 0.85
DDX55-205ENST00000538744 SAMD11Q96NU1 681 aa20.36■□□□□ 0.85
DDX55-205ENST00000538744 ZNF106Q9H2Y7 1883 aaKnown RBP20.36■□□□□ 0.85
DDX55-205ENST00000538744 TAS2R13Q9NYV9 303 aa20.36■□□□□ 0.85
DDX55-205ENST00000538744 NCKIPSDQ9NZQ3 722 aa20.36■□□□□ 0.85
DDX55-205ENST00000538744 SCN8AQ9UQD0 1980 aa20.36■□□□□ 0.85
DDX55-205ENST00000538744 A0A0J9YYE9 177 aa20.35■□□□□ 0.85
DDX55-205ENST00000538744 CAPN14A8MX76 684 aa20.35■□□□□ 0.85
DDX55-205ENST00000538744 TRBC1P01850 177 aa20.35■□□□□ 0.85
DDX55-205ENST00000538744 ALPIP09923 528 aa20.35■□□□□ 0.85
DDX55-205ENST00000538744 ESRRAP11474 423 aaPredicted RBP20.35■□□□□ 0.85
DDX55-205ENST00000538744 PABPC1P11940 636 aaKnown RBP20.35■□□□□ 0.85
DDX55-205ENST00000538744 ZNF37AP17032 561 aaPredicted RBP20.35■□□□□ 0.85
DDX55-205ENST00000538744 CDKN1CP49918 316 aaPredicted RBP20.35■□□□□ 0.85
DDX55-205ENST00000538744 RPL14P50914 215 aaKnown RBP20.35■□□□□ 0.85
DDX55-205ENST00000538744 ASTLQ6HA08 431 aaPredicted RBP20.35■□□□□ 0.85
DDX55-205ENST00000538744 C22orf39Q6P5X5 142 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms