RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 ALG2Q9H553 416 aa18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 HPS4Q9NQG7 708 aa18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 ENPP5Q9UJA9 477 aa18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 DAB1O75553 588 aa18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 RSL1D1O76021 490 aaKnown RBP18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 RBP1P09455 135 aa18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 NCAM1P13591 858 aa18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 CPB1P15086 417 aa18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 GSK3BP49841 420 aa18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 YBX1P67809 324 aaKnown RBP18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 NDUFA5Q16718 116 aa18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 PIWIL3Q7Z3Z3 882 aaKnown RBP18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 BNIPLQ7Z465 357 aa18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 THAP5Q7Z6K1 395 aa18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 PTCD2Q8WV60 388 aaKnown RBP18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 KIF12Q96FN5 646 aa18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 BTN2A3PQ96KV6 586 aa18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 NSMCE3Q96MG7 304 aa18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 ADNPQ9H2P0 1102 aa18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 MTRRQ9UBK8 725 aa18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 RBMX2Q9Y388 322 aaKnown RBP18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 A0A0G2JMZ2 1700 aa18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 LRRC37A2A6NM11 1700 aa18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 FAM47E-STBD1D6RA91 191 aa18.58■□□□□ 0.57
SFSWAP-207ENST00000538548 LSM1O15116 133 aaKnown RBP18.58■□□□□ 0.57
SFSWAP-207ENST00000538548 PTPN2P17706 415 aa18.58■□□□□ 0.57
SFSWAP-207ENST00000538548 ARNTP27540 789 aa18.58■□□□□ 0.57
SFSWAP-207ENST00000538548 IFITM3Q01628 133 aa18.58■□□□□ 0.57
SFSWAP-207ENST00000538548 INAQ16352 499 aa18.58■□□□□ 0.57
SFSWAP-207ENST00000538548 AMHR2Q16671 573 aa18.58■□□□□ 0.57
SFSWAP-207ENST00000538548 AASDHQ4L235 1098 aaPredicted RBP18.58■□□□□ 0.57
SFSWAP-207ENST00000538548 EFCAB12Q6NXP0 572 aa18.58■□□□□ 0.57
SFSWAP-207ENST00000538548 C2CD4AQ8NCU7 369 aaPredicted RBP18.58■□□□□ 0.57
SFSWAP-207ENST00000538548 PDZD8Q8NEN9 1154 aa18.58■□□□□ 0.57
SFSWAP-207ENST00000538548 TRPM4Q8TD43 1214 aa18.58■□□□□ 0.57
SFSWAP-207ENST00000538548 TMEM125Q96AQ2 219 aa18.58■□□□□ 0.57
SFSWAP-207ENST00000538548 TEPSINQ96N21 525 aa18.58■□□□□ 0.57
SFSWAP-207ENST00000538548 FAM72CH0Y354 149 aa18.58■□□□□ 0.56
SFSWAP-207ENST00000538548 UGT2B11O75310 529 aa18.58■□□□□ 0.56
SFSWAP-207ENST00000538548 MATN4O95460 622 aa18.58■□□□□ 0.56
SFSWAP-207ENST00000538548 CHRM3P20309 590 aa18.58■□□□□ 0.56
SFSWAP-207ENST00000538548 IMPDH1P20839 514 aa18.58■□□□□ 0.56
SFSWAP-207ENST00000538548 ALDH3A2P51648 485 aa18.58■□□□□ 0.56
SFSWAP-207ENST00000538548 ARSFP54793 590 aa18.58■□□□□ 0.56
SFSWAP-207ENST00000538548 CLPPQ16740 277 aaPredicted RBP18.58■□□□□ 0.56
SFSWAP-207ENST00000538548 INTS6LQ5JSJ4 861 aaKnown RBP18.58■□□□□ 0.56
SFSWAP-207ENST00000538548 OTUD3Q5T2D3 398 aaPredicted RBP18.58■□□□□ 0.56
SFSWAP-207ENST00000538548 FAM72AQ5TYM5 149 aa18.58■□□□□ 0.56
SFSWAP-207ENST00000538548 FAM72DQ6L9T8 149 aa18.58■□□□□ 0.56
SFSWAP-207ENST00000538548 ZNF280DQ6N043 979 aa18.58■□□□□ 0.56
SFSWAP-207ENST00000538548 FAM72BQ86X60 149 aa18.58■□□□□ 0.56
SFSWAP-207ENST00000538548 RNF135Q8IUD6 432 aa18.58■□□□□ 0.56
SFSWAP-207ENST00000538548 NPWQ8N729 165 aa18.58■□□□□ 0.56
SFSWAP-207ENST00000538548 HDAC2Q92769 488 aaKnown RBP18.58■□□□□ 0.56
SFSWAP-207ENST00000538548 ZBED3Q96IU2 234 aaPredicted RBP18.58■□□□□ 0.56
SFSWAP-207ENST00000538548 UBXN10Q96LJ8 280 aa18.58■□□□□ 0.56
SFSWAP-207ENST00000538548 NPY6RQ99463 290 aa18.58■□□□□ 0.56
SFSWAP-207ENST00000538548 KCTD14Q9BQ13 255 aaPredicted RBP18.58■□□□□ 0.56
SFSWAP-207ENST00000538548 ATP13A3Q9H7F0 1226 aa18.58■□□□□ 0.56
SFSWAP-207ENST00000538548 RMND5AQ9H871 391 aa18.58■□□□□ 0.56
SFSWAP-207ENST00000538548 KLHL3Q9UH77 587 aa18.58■□□□□ 0.56
SFSWAP-207ENST00000538548 SUN2Q9UH99 717 aa18.58■□□□□ 0.56
SFSWAP-207ENST00000538548 PCDHGA11Q9Y5H2 935 aa18.58■□□□□ 0.56
SFSWAP-207ENST00000538548 M0QYT0 321 aa18.57■□□□□ 0.56
SFSWAP-207ENST00000538548 PSMD3O43242 534 aa18.57■□□□□ 0.56
SFSWAP-207ENST00000538548 MSI1O43347 362 aaKnown RBP18.57■□□□□ 0.56
SFSWAP-207ENST00000538548 DNAJB5O75953 348 aa18.57■□□□□ 0.56
SFSWAP-207ENST00000538548 MYO1DO94832 1006 aa18.57■□□□□ 0.56
SFSWAP-207ENST00000538548 LTA4HP09960 611 aaKnown RBP18.57■□□□□ 0.56
SFSWAP-207ENST00000538548 ZIK1Q3SY52 487 aaPredicted RBP18.57■□□□□ 0.56
SFSWAP-207ENST00000538548 ESRP1Q6NXG1 681 aaKnown RBP18.57■□□□□ 0.56
SFSWAP-207ENST00000538548 TAF2Q6P1X5 1199 aa18.57■□□□□ 0.56
SFSWAP-207ENST00000538548 PLEKHG7Q6ZR37 379 aa18.57■□□□□ 0.56
SFSWAP-207ENST00000538548 ITIH5Q86UX2 942 aa18.57■□□□□ 0.56
SFSWAP-207ENST00000538548 IFNEQ86WN2 208 aa18.57■□□□□ 0.56
SFSWAP-207ENST00000538548 STAP1Q9ULZ2 295 aa18.57■□□□□ 0.56
SFSWAP-207ENST00000538548 CITO14578 2027 aa18.57■□□□□ 0.56
SFSWAP-207ENST00000538548 TGFB3P10600 412 aa18.57■□□□□ 0.56
SFSWAP-207ENST00000538548 HTR1BP28222 390 aa18.57■□□□□ 0.56
SFSWAP-207ENST00000538548 TPI1P60174 286 aa18.57■□□□□ 0.56
SFSWAP-207ENST00000538548 POU6F1Q14863 301 aa18.57■□□□□ 0.56
SFSWAP-207ENST00000538548 C6orf183Q5T699 404 aa18.57■□□□□ 0.56
SFSWAP-207ENST00000538548 ZNF470Q6ECI4 717 aa18.57■□□□□ 0.56
SFSWAP-207ENST00000538548 PLPPR4Q7Z2D5 763 aa18.57■□□□□ 0.56
SFSWAP-207ENST00000538548 DCP1BQ8IZD4 617 aaKnown RBP18.57■□□□□ 0.56
SFSWAP-207ENST00000538548 CLYBLQ8N0X4 340 aa18.57■□□□□ 0.56
SFSWAP-207ENST00000538548 PIK3C3Q8NEB9 887 aa18.57■□□□□ 0.56
SFSWAP-207ENST00000538548 RPL10LQ96L21 214 aaKnown RBP18.57■□□□□ 0.56
SFSWAP-207ENST00000538548 CHID1Q9BWS9 393 aa18.57■□□□□ 0.56
SFSWAP-207ENST00000538548 FNDC1Q4ZHG4 1894 aaPredicted RBP18.57■□□□□ 0.56
SFSWAP-207ENST00000538548 MT-ND1P03886 318 aa18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 NCK1P16333 377 aa18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 GABARAPL2P60520 117 aa18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 SELENBP1Q13228 472 aa18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 DNASE1L3Q13609 305 aa18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 MAPRE1Q15691 268 aaKnown RBP18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 CTF1Q16619 201 aa18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 INAVAQ3KP66 663 aa18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 FAM219BQ5XKK7 198 aa18.56■□□□□ 0.56
SFSWAP-207ENST00000538548 SLCO6A1Q86UG4 719 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms