RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 CDC16Q13042 620 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 BFSP2Q13515 415 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 CYLC2Q14093 348 aaPredicted RBP9.25□□□□□ -0.93
DDB1-211ENST00000538280 SQLEQ14534 574 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 SEMA3AQ14563 771 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 ZNF235Q14590 738 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 PDCD2Q16342 344 aaPredicted RBP9.25□□□□□ -0.93
DDB1-211ENST00000538280 UNC50Q53HI1 259 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 PPM1LQ5SGD2 360 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 ZNF678Q5SXM1 525 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 TRIM68Q6AZZ1 485 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 SLC8B1Q6J4K2 584 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 FAM117BQ6P1L5 589 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 KLC3Q6P597 504 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 BNC2Q6ZN30 1099 aaPredicted RBP9.25□□□□□ -0.93
DDB1-211ENST00000538280 CHST9Q7L1S5 443 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 KDELC2Q7Z4H8 507 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 PTAR1Q7Z6K3 402 aaPredicted RBP9.25□□□□□ -0.93
DDB1-211ENST00000538280 ISCA2Q86U28 154 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 CUZD1Q86UP6 607 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 HPS6Q86YV9 775 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 DSELQ8IZU8 1212 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 LGI2Q8N0V4 545 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 SPATA6LQ8N4H0 392 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 AFAP1L2Q8N4X5 818 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 CCNYL1Q8N7R7 359 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 PHOSPHO2Q8TCD6 241 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 AGR3Q8TD06 166 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 BRSK1Q8TDC3 778 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 GPR152Q8TDT2 470 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 BCL7CQ8WUZ0 217 aaPredicted RBP9.25□□□□□ -0.93
DDB1-211ENST00000538280 IFT43Q96FT9 208 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 B3GALT6Q96L58 329 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 TBATAQ96M53 351 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 NSMCE3Q96MG7 304 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 CATSPER2Q96P56 530 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 PSKH2Q96QS6 385 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 NR1H4Q96RI1 486 aaPredicted RBP9.25□□□□□ -0.93
DDB1-211ENST00000538280 SERPINI1Q99574 410 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 SEPT5Q99719 369 aaPredicted RBP9.25□□□□□ -0.93
DDB1-211ENST00000538280 AARSD1Q9BTE6 412 aaKnown RBP9.25□□□□□ -0.93
DDB1-211ENST00000538280 CWH43Q9H720 699 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 UBE2ZQ9H832 354 aaPredicted RBP9.25□□□□□ -0.93
DDB1-211ENST00000538280 CYP4F11Q9HBI6 524 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 EML4Q9HC35 981 aaKnown RBP9.25□□□□□ -0.93
DDB1-211ENST00000538280 TNFRSF12AQ9NP84 129 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 NLE1Q9NVX2 485 aaPredicted RBP9.25□□□□□ -0.93
DDB1-211ENST00000538280 POLR3BQ9NW08 1133 aaPredicted RBP9.25□□□□□ -0.93
DDB1-211ENST00000538280 UTP6Q9NYH9 597 aaKnown RBP9.25□□□□□ -0.93
DDB1-211ENST00000538280 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.25□□□□□ -0.93
DDB1-211ENST00000538280 SLC27A5Q9Y2P5 690 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 KCTD3Q9Y597 815 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 PCDHB7Q9Y5E2 793 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 BACE2Q9Y5Z0 518 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 PLXNA4Q9HCM2 1894 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 TRIOO75962 3097 aa9.25□□□□□ -0.93
DDB1-211ENST00000538280 ZNF318Q5VUA4 2279 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.24□□□□□ -0.93
DDB1-211ENST00000538280 TTC24A2A3L6 582 aaPredicted RBP9.24□□□□□ -0.93
DDB1-211ENST00000538280 CCDC162PA2VCL2 907 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 MAGEA13PA6NCF6 341 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 OR51F1A6NGY5 319 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 CD3EAPO15446 510 aaKnown RBP9.24□□□□□ -0.93
DDB1-211ENST00000538280 KDELR3O43731 214 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 GPR37L1O60883 481 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 GJB3O75712 270 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 GLP2RO95838 553 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 CAPNS1P04632 268 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 HMBSP08397 361 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 LINGO3P0C6S8 592 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 CD9P21926 228 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 CDC25CP30307 473 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 ETFBP38117 255 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 DPP6P42658 865 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 NUDT2P50583 147 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 ZNF140P52738 457 aaPredicted RBP9.24□□□□□ -0.93
DDB1-211ENST00000538280 STC1P52823 247 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 PRAMEP78395 509 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 DSG1Q02413 1049 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 GNA12Q03113 381 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 DUSP4Q13115 394 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 MAPRE2Q15555 327 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 UGT3A2Q3SY77 523 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 TMEM198Q66K66 360 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 C8orf82Q6P1X6 216 aaPredicted RBP9.24□□□□□ -0.93
DDB1-211ENST00000538280 IZUMO2Q6UXV1 221 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 HACD2Q6Y1H2 254 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 CYHR1Q6ZMK1 362 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.24□□□□□ -0.93
DDB1-211ENST00000538280 TAS1R1Q7RTX1 841 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 PDSS2Q86YH6 399 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 TMEM126BQ8IUX1 230 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 ABI1Q8IZP0 508 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 BBS5Q8N3I7 341 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 OR52K2Q8NGK3 314 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 OR13C4Q8NGS5 318 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 RHEBL1Q8TAI7 183 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 UCMAQ8WVF2 138 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 PYDC1Q8WXC3 89 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 SEPT8Q92599 483 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms