RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 CDC26Q8NHZ8 85 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 FAM45AQ8TCE6 357 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 FAM149B1Q96BN6 582 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 UBXN10Q96LJ8 280 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 PPP1R36Q96LQ0 422 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 C6orf62Q9GZU0 229 aaPredicted RBP8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 FAM49AQ9H0Q0 323 aaPredicted RBP8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 RIOX1Q9H6W3 641 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 RAPGEFL1Q9UHV5 662 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 RIMKLBQ9ULI2 386 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 TLR6Q9Y2C9 796 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 PCDHGB6Q9Y5F9 930 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 CCDC78A2IDD5 438 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 PPEF1O14829 653 aaPredicted RBP8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 TBC1D4O60343 1298 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 SPATA31C1P0DKV0 1188 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 ITGALP20701 1170 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 ATP6V1B2P21281 511 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 PCMT1P22061 227 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 DNAJB1P25685 340 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 RFC2P35250 354 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 SLC15A1P46059 708 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 ARHGDIAP52565 204 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 RIN1Q13671 783 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 IMPG1Q17R60 797 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 DPY19L1Q2PZI1 675 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 C2CD6Q53TS8 623 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 SPANXN2Q5MJ10 180 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 ZBTB37Q5TC79 503 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 TMEM198Q66K66 360 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 DENND5AQ6IQ26 1287 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 BRAT1Q6PJG6 821 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 USP17L2Q6R6M4 530 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 HACD2Q6Y1H2 254 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 RETREG3Q86VR2 466 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 LDHDQ86WU2 507 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 BBS7Q8IWZ6 715 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 FTHL17Q9BXU8 183 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 SLC6A15Q9H2J7 730 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 NIPAL2Q9H841 368 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 MCCC2Q9HCC0 563 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 PAK5Q9P286 719 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 SAE1Q9UBE0 346 aaPredicted RBP8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 MAN2B2Q9Y2E5 1009 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 NAALAD2Q9Y3Q0 740 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 RGPD8O14715 1765 aaPredicted RBP8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 RGPD5Q99666 1765 aa8.53□□□□□ -1.04
SRGAP1-202ENST00000537556 SLC15A5A6NIM6 579 aa8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 NFIBO00712 420 aa8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 RGS5O15539 181 aa8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 HTR1AP08908 422 aa8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 TFEBP19484 476 aa8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 PTX3P26022 381 aaPredicted RBP8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 TYK2P29597 1187 aa8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 SHMT2P34897 504 aa8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 APLP1P51693 650 aa8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 NCS1P62166 190 aa8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 TFAMQ00059 246 aaKnown RBP8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 TEKQ02763 1124 aa8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 FAM214AQ32MH5 1076 aa8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 C6orf132Q5T0Z8 1188 aa8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 TIGD3Q6B0B8 471 aa8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 REP15Q6BDI9 236 aa8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 ZBTB33Q86T24 672 aa8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 TCTE3Q8IZS6 198 aa8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 TAGAPQ8N103 731 aa8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 SLAIN1Q8ND83 568 aa8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 SLC22A17Q8WUG5 538 aa8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 DNAJA4Q8WW22 397 aaPredicted RBP8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 YIPF6Q96EC8 236 aa8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 AURKBQ96GD4 344 aaPredicted RBP8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 ELMO2Q96JJ3 720 aa8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 RDH12Q96NR8 316 aa8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 ALS2Q96Q42 1657 aa8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 FYTTD1Q96QD9 318 aaKnown RBP8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 GAD1Q99259 594 aa8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 TRAF4Q9BUZ4 470 aaPredicted RBP8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 CCDC32Q9BV29 185 aa8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 SLC25A23Q9BV35 468 aa8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 ALOXE3Q9BYJ1 711 aa8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 KAT8Q9H7Z6 458 aaKnown RBP8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 ENTPD7Q9NQZ7 604 aa8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 RAB6BQ9NRW1 208 aa8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 ZNFX1Q9P2E3 1918 aaKnown RBP8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 OPTCQ9UBM4 332 aa8.52□□□□□ -1.04
SRGAP1-202ENST00000537556 SNAP23O00161 211 aa8.52□□□□□ -1.05
SRGAP1-202ENST00000537556 TBX3O15119 743 aa8.52□□□□□ -1.05
SRGAP1-202ENST00000537556 RNGTTO60942 597 aaKnown RBP8.52□□□□□ -1.05
SRGAP1-202ENST00000537556 UGT2B17O75795 530 aa8.52□□□□□ -1.05
SRGAP1-202ENST00000537556 SOAT2O75908 522 aa8.52□□□□□ -1.05
SRGAP1-202ENST00000537556 RETP07949 1114 aa8.52□□□□□ -1.05
SRGAP1-202ENST00000537556 HOXB3P14651 431 aaPredicted RBP8.52□□□□□ -1.05
SRGAP1-202ENST00000537556 MSH3P20585 1137 aa8.52□□□□□ -1.05
SRGAP1-202ENST00000537556 RPL9P32969 192 aaKnown RBP8.52□□□□□ -1.05
SRGAP1-202ENST00000537556 GGT5P36269 586 aa8.52□□□□□ -1.05
SRGAP1-202ENST00000537556 HNF4AP41235 474 aa8.52□□□□□ -1.05
SRGAP1-202ENST00000537556 GARSP41250 739 aaKnown RBP8.52□□□□□ -1.05
SRGAP1-202ENST00000537556 CLK2P49760 499 aaKnown RBP8.52□□□□□ -1.05
SRGAP1-202ENST00000537556 GZMKP49863 264 aa8.52□□□□□ -1.05
SRGAP1-202ENST00000537556 SLC7A2P52569 658 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms