RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 ADGRA2Q96PE1 1338 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 PLIN4Q96Q06 1357 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 HOXA2O43364 376 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 SH3BP5O60239 455 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 MED26O95402 600 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 ARP10275 920 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 SYN1P17600 705 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 TFE3P19532 575 aaPredicted RBP10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 EN2P19622 333 aaPredicted RBP10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 TBXAS1P24557 533 aaPredicted RBP10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 SLC26A3P40879 764 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 MAPK12P53778 367 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 FPGSQ05932 587 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 SCRN3Q0VDG4 424 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 EPC2Q52LR7 807 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 DDIASQ8IXT1 998 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 OR6F1Q8NGZ6 308 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 EPS8L2Q9H6S3 715 aa10.89□□□□□ -0.67
CLSTN3-207ENST00000537408 hCG_1818297A0A087WSY0 165 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 SLCO1B7G3V0H7 640 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 TPST1O60507 370 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 IL7P13232 177 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 CCND3P30281 292 aaPredicted RBP10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 OSTNP61366 133 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 SQLEQ14534 574 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 BRMS1LQ5PSV4 323 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 LRRC38Q5VT99 294 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 HMBOX1Q6NT76 420 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 ZNF438Q7Z4V0 828 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 GALNT11Q8NCW6 608 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 LHFPL5Q8TAF8 219 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 ZNF668Q96K58 619 aaPredicted RBP10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 WASH6PQ9NQA3 447 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 CCDC59Q9P031 241 aaKnown RBP10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 CPSF3Q9UKF6 684 aaKnown RBP10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 DHRS12A0PJE2 317 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 SLC9A3R1O14745 358 aaPredicted RBP10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 PEX10O60683 326 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 PSKH1P11801 424 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 COX10Q12887 443 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 NFE2L1Q14494 772 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 XKR3Q5GH77 459 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 NOXA1Q86UR1 476 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 SYTL1Q8IYJ3 562 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 SAMD14Q8IZD0 417 aaPredicted RBP10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 LMO3Q8TAP4 145 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 MAGEE2Q8TD90 523 aaPredicted RBP10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 ANKRD49Q8WVL7 239 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 SNAPC3Q92966 411 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 REXO5Q96IC2 774 aaKnown RBP10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 B3GALT6Q96L58 329 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 PPP1R36Q96LQ0 422 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 SORT1Q99523 831 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 LPIN3Q9BQK8 851 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 BOLA1Q9Y3E2 137 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 CD4P01730 458 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 UQCRC1P31930 480 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 AQP6Q13520 282 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 PGM5Q15124 567 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 ATP6AP1Q15904 470 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 PLA2G4EQ3MJ16 856 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 GARNL3Q5VVW2 1013 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 GTF2IRD2BQ6EKJ0 949 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 TIFABQ6ZNK6 161 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 GTF2IRD2Q86UP8 949 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 PSD4Q8NDX1 1056 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 RDM1Q8NG50 284 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 OR10Z1Q8NGY1 313 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 ACTL9Q8TC94 416 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 HERVK_113Q902F9 699 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 RORBQ92753 470 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 ARMC5Q96C12 935 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 OR52B2Q96RD2 323 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 CSF3RQ99062 836 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 RSPH9Q9H1X1 276 aaPredicted RBP10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 VTI1BQ9UEU0 232 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 Q9Y3F1 56 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 PCDHGA10Q9Y5H3 936 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 TEX264Q9Y6I9 313 aa10.88□□□□□ -0.67
CLSTN3-207ENST00000537408 H0Y858 1186 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 H0YAE9 185 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 TBC1D4O60343 1298 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 CPNE3O75131 537 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 ZNF254O75437 659 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 IFI30P13284 250 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 MAGP20916 626 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 CCL23P55773 120 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 RHAGQ02094 409 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 TRAF3Q13114 568 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 KIZQ2M2Z5 673 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 RAB43Q86YS6 212 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 IGDCC3Q8IVU1 814 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 C8orf59Q8N0T1 100 aaPredicted RBP10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 OR13J1Q8NGT2 312 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 CYP2W1Q8TAV3 490 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 SLC35B2Q8TB61 432 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 GTF2H4Q92759 462 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 MARVELD3Q96A59 401 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 TOPORSQ9NS56 1045 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms