RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 PAX1P15863 534 aa4.83□□□□□ -1.64
CCDC7-208ENST00000537047 SHMT1P34896 483 aa4.83□□□□□ -1.64
CCDC7-208ENST00000537047 VEPH1Q14D04 833 aa4.83□□□□□ -1.64
CCDC7-208ENST00000537047 NOTCH2NLQ7Z3S9 236 aa4.83□□□□□ -1.64
CCDC7-208ENST00000537047 ADGRG6Q86SQ4 1221 aa4.83□□□□□ -1.64
CCDC7-208ENST00000537047 ADAD2Q8NCV1 583 aaKnown RBP4.83□□□□□ -1.64
CCDC7-208ENST00000537047 BEST2Q8NFU1 509 aa4.83□□□□□ -1.64
CCDC7-208ENST00000537047 ZNF354BQ96LW1 612 aa4.83□□□□□ -1.64
CCDC7-208ENST00000537047 BBS4Q96RK4 519 aa4.83□□□□□ -1.64
CCDC7-208ENST00000537047 MTERF1Q99551 399 aaKnown RBP4.83□□□□□ -1.64
CCDC7-208ENST00000537047 SYT17Q9BSW7 474 aa4.83□□□□□ -1.64
CCDC7-208ENST00000537047 TAOK3Q9H2K8 898 aa4.83□□□□□ -1.64
CCDC7-208ENST00000537047 NOD2Q9HC29 1040 aa4.83□□□□□ -1.64
CCDC7-208ENST00000537047 FBXO9Q9UK97 447 aaPredicted RBP4.83□□□□□ -1.64
CCDC7-208ENST00000537047 TMEM202A6NGA9 273 aa4.82□□□□□ -1.64
CCDC7-208ENST00000537047 BAG4O95429 457 aaKnown RBP4.82□□□□□ -1.64
CCDC7-208ENST00000537047 RNF224P0DH78 156 aa4.82□□□□□ -1.64
CCDC7-208ENST00000537047 MAOAP21397 527 aa4.82□□□□□ -1.64
CCDC7-208ENST00000537047 BDKRB2P30411 391 aa4.82□□□□□ -1.64
CCDC7-208ENST00000537047 DCTP40126 519 aa4.82□□□□□ -1.64
CCDC7-208ENST00000537047 PDE1BQ01064 536 aa4.82□□□□□ -1.64
CCDC7-208ENST00000537047 GTF2H2Q13888 395 aa4.82□□□□□ -1.64
CCDC7-208ENST00000537047 TAF11Q15544 211 aa4.82□□□□□ -1.64
CCDC7-208ENST00000537047 LPAL2Q16609 132 aa4.82□□□□□ -1.64
CCDC7-208ENST00000537047 SLC35E4Q6ICL7 350 aa4.82□□□□□ -1.64
CCDC7-208ENST00000537047 TRNP1Q6NT89 227 aa4.82□□□□□ -1.64
CCDC7-208ENST00000537047 GTF2H2CQ6P1K8 395 aa4.82□□□□□ -1.64
CCDC7-208ENST00000537047 TADA2BQ86TJ2 420 aa4.82□□□□□ -1.64
CCDC7-208ENST00000537047 C2CD5Q86YS7 1000 aa4.82□□□□□ -1.64
CCDC7-208ENST00000537047 ZCCHC9Q8N567 271 aaKnown RBP4.82□□□□□ -1.64
CCDC7-208ENST00000537047 ZBTB2Q8N680 514 aa4.82□□□□□ -1.64
CCDC7-208ENST00000537047 CNBD1Q8NA66 436 aa4.82□□□□□ -1.64
CCDC7-208ENST00000537047 MAGEC3Q8TD91 643 aa4.82□□□□□ -1.64
CCDC7-208ENST00000537047 ELP4Q96EB1 424 aa4.82□□□□□ -1.64
CCDC7-208ENST00000537047 C17orf77Q96MU5 243 aa4.82□□□□□ -1.64
CCDC7-208ENST00000537047 TKTL2Q9H0I9 626 aa4.82□□□□□ -1.64
CCDC7-208ENST00000537047 PPP1R3EQ9H7J1 279 aa4.82□□□□□ -1.64
CCDC7-208ENST00000537047 GPR108Q9NPR9 543 aa4.82□□□□□ -1.64
CCDC7-208ENST00000537047 HEXAP06865 529 aa4.81□□□□□ -1.64
CCDC7-208ENST00000537047 ADCK5Q3MIX3 580 aa4.81□□□□□ -1.64
CCDC7-208ENST00000537047 LINGO2Q7L985 606 aa4.81□□□□□ -1.64
CCDC7-208ENST00000537047 SPATA6LQ8N4H0 392 aa4.81□□□□□ -1.64
CCDC7-208ENST00000537047 CADM4Q8NFZ8 388 aa4.81□□□□□ -1.64
CCDC7-208ENST00000537047 ST6GAL2Q96JF0 529 aa4.81□□□□□ -1.64
CCDC7-208ENST00000537047 LBHD1Q9BQE6 289 aaPredicted RBP4.81□□□□□ -1.64
CCDC7-208ENST00000537047 DLGAP4Q9Y2H0 992 aa4.81□□□□□ -1.64
CCDC7-208ENST00000537047 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.81□□□□□ -1.64
CCDC7-208ENST00000537047 WDR1O75083 606 aa4.8□□□□□ -1.64
CCDC7-208ENST00000537047 TACC1O75410 805 aa4.8□□□□□ -1.64
CCDC7-208ENST00000537047 METAP2P50579 478 aaKnown RBP eCLIP4.8□□□□□ -1.64
CCDC7-208ENST00000537047 GNB1P62873 340 aa4.8□□□□□ -1.64
CCDC7-208ENST00000537047 TBL3Q12788 808 aaKnown RBP4.8□□□□□ -1.64
CCDC7-208ENST00000537047 ANKRD1Q15327 319 aa4.8□□□□□ -1.64
CCDC7-208ENST00000537047 ZNF280DQ6N043 979 aa4.8□□□□□ -1.64
CCDC7-208ENST00000537047 FAM171BQ6P995 826 aa4.8□□□□□ -1.64
CCDC7-208ENST00000537047 KCTD18Q6PI47 426 aaPredicted RBP4.8□□□□□ -1.64
CCDC7-208ENST00000537047 C15orf39Q6ZRI6 1047 aa4.8□□□□□ -1.64
CCDC7-208ENST00000537047 CCDC146Q8IYE0 955 aa4.8□□□□□ -1.64
CCDC7-208ENST00000537047 NDST4Q9H3R1 872 aa4.8□□□□□ -1.64
CCDC7-208ENST00000537047 BPIFA1Q9NP55 256 aa4.8□□□□□ -1.64
CCDC7-208ENST00000537047 FAM118AQ9NWS6 357 aa4.8□□□□□ -1.64
CCDC7-208ENST00000537047 LOXL2Q9Y4K0 774 aa4.8□□□□□ -1.64
CCDC7-208ENST00000537047 URODP06132 367 aa4.79□□□□□ -1.64
CCDC7-208ENST00000537047 GALTP07902 379 aa4.79□□□□□ -1.64
CCDC7-208ENST00000537047 HOXC13P31276 330 aa4.79□□□□□ -1.64
CCDC7-208ENST00000537047 EFNB1P98172 346 aa4.79□□□□□ -1.64
CCDC7-208ENST00000537047 SLC1A5Q15758 541 aa4.79□□□□□ -1.64
CCDC7-208ENST00000537047 TCTN1Q2MV58 587 aa4.79□□□□□ -1.64
CCDC7-208ENST00000537047 ANKRD45Q5TZF3 282 aa4.79□□□□□ -1.64
CCDC7-208ENST00000537047 ATF7IPQ6VMQ6 1270 aa4.79□□□□□ -1.64
CCDC7-208ENST00000537047 HUS1BQ8NHY5 278 aa4.79□□□□□ -1.64
CCDC7-208ENST00000537047 RHBDF1Q96CC6 855 aa4.79□□□□□ -1.64
CCDC7-208ENST00000537047 REEP2Q9BRK0 252 aa4.79□□□□□ -1.64
CCDC7-208ENST00000537047 ITM2CQ9NQX7 267 aa4.79□□□□□ -1.64
CCDC7-208ENST00000537047 FAM96BQ9Y3D0 163 aa4.79□□□□□ -1.64
CCDC7-208ENST00000537047 CTAGE9A4FU28 777 aa4.78□□□□□ -1.64
CCDC7-208ENST00000537047 KRTAP16-1A8MUX0 517 aa4.78□□□□□ -1.64
CCDC7-208ENST00000537047 BLOC1S5-TXNDC5H3BN57 136 aa4.78□□□□□ -1.64
CCDC7-208ENST00000537047 MT-CYBP00156 380 aaPredicted RBP4.78□□□□□ -1.64
CCDC7-208ENST00000537047 CTAGE8P0CG41 777 aa4.78□□□□□ -1.64
CCDC7-208ENST00000537047 POU1F1P28069 291 aa4.78□□□□□ -1.64
CCDC7-208ENST00000537047 WDR38Q5JTN6 314 aa4.78□□□□□ -1.64
CCDC7-208ENST00000537047 DUS1LQ6P1R4 473 aaKnown RBP4.78□□□□□ -1.64
CCDC7-208ENST00000537047 SLC27A1Q6PCB7 646 aa4.78□□□□□ -1.64
CCDC7-208ENST00000537047 CTAGE4Q8IX94 777 aa4.78□□□□□ -1.64
CCDC7-208ENST00000537047 EGFL8Q99944 293 aa4.78□□□□□ -1.64
CCDC7-208ENST00000537047 GLIS2Q9BZE0 524 aaPredicted RBP4.78□□□□□ -1.64
CCDC7-208ENST00000537047 HINT3Q9NQE9 182 aaKnown RBP4.78□□□□□ -1.64
CCDC7-208ENST00000537047 ZNF624Q9P2J8 865 aaPredicted RBP4.78□□□□□ -1.64
CCDC7-208ENST00000537047 HSPB7Q9UBY9 170 aa4.78□□□□□ -1.64
CCDC7-208ENST00000537047 GOLGA6L9A6NEM1 432 aa4.77□□□□□ -1.65
CCDC7-208ENST00000537047 SMIM1B2RUZ4 78 aa4.77□□□□□ -1.65
CCDC7-208ENST00000537047 INHBAP08476 426 aa4.77□□□□□ -1.65
CCDC7-208ENST00000537047 CHRNB4P30926 498 aa4.77□□□□□ -1.65
CCDC7-208ENST00000537047 HOXA1P49639 335 aaPredicted RBP4.77□□□□□ -1.65
CCDC7-208ENST00000537047 RPL24P83731 157 aaKnown RBP4.77□□□□□ -1.65
CCDC7-208ENST00000537047 SORDQ00796 357 aa4.77□□□□□ -1.65
CCDC7-208ENST00000537047 ZNF234Q14588 700 aa4.77□□□□□ -1.65
CCDC7-208ENST00000537047 PPP2R5BQ15173 497 aa4.77□□□□□ -1.65
CCDC7-208ENST00000537047 SFMBT2Q5VUG0 894 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms