RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 UGT2B4P06133 528 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 YES1P07947 543 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 ATP4BP51164 291 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 EVX2Q03828 476 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 ITPK1Q13572 414 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 GALNT3Q14435 633 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 FAM122CQ6P4D5 195 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 C1orf186Q6ZWK4 172 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 P2RY8Q86VZ1 359 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 UBE2J2Q8N2K1 259 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 NAT16Q8N8M0 369 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 TPD52L3Q96J77 140 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 SLC39A3Q9BRY0 314 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 NPLQ9BXD5 320 aaPredicted RBP5.4□□□□□ -1.54
PTPRD-213ENST00000537002 POLE4Q9NR33 117 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 PTTG3PQ9NZH4 202 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 ATP6V1HQ9UI12 483 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 ENPP5Q9UJA9 477 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 PEX16Q9Y5Y5 336 aa5.4□□□□□ -1.54
PTPRD-213ENST00000537002 M0QYT0 321 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 AURKAO14965 403 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 RFPL2O75678 378 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 CABYRO75952 493 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 LYPLA2O95372 231 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 FYNP06241 537 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 RPL17P18621 184 aaKnown RBP5.4□□□□□ -1.55
PTPRD-213ENST00000537002 AKT1P31749 480 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 TALDO1P37837 337 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 NKX2-5P52952 324 aaPredicted RBP5.4□□□□□ -1.55
PTPRD-213ENST00000537002 GEMP55040 296 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 RBP5P82980 135 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 SKIV2LQ15477 1246 aaKnown RBP5.4□□□□□ -1.55
PTPRD-213ENST00000537002 AMHR2Q16671 573 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 BTBD8Q5XKL5 378 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 SH2D5Q6ZV89 423 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 MON1BQ7L1V2 547 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 RETREG1Q9H6L5 497 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 TBC1D14Q9P2M4 693 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 KCNN3Q9UGI6 736 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 SFMBT1Q9UHJ3 866 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 RABL2BQ9UNT1 228 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 HSPE1-MOB4S4R3N1 261 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 PHLPP1O60346 1717 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 GRXCR2A6NFK2 248 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 SEC14L2O76054 403 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 S100A9P06702 114 aaKnown RBP5.4□□□□□ -1.55
PTPRD-213ENST00000537002 DDX5P17844 614 aaKnown RBP5.4□□□□□ -1.55
PTPRD-213ENST00000537002 GDF10P55107 478 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 RPL7AP62424 266 aaKnown RBP5.4□□□□□ -1.55
PTPRD-213ENST00000537002 SREBF2Q12772 1141 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 TMEM132DQ14C87 1099 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 NCF4Q15080 339 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 XKR3Q5GH77 459 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 MAMDC4Q6UXC1 1216 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 ANKRD52Q8NB46 1076 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 OR52K1Q8NGK4 314 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 RTP4Q96DX8 246 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 PKP2Q99959 881 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 KCNS3Q9BQ31 491 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.4□□□□□ -1.55
PTPRD-213ENST00000537002 XPR1Q9UBH6 696 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 EBF1Q9UH73 591 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 RAD54BQ9Y620 910 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 TCRBV3S1A0A5B6 114 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 STX16-NPEPL1H3BU86 382 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 MYL12BO14950 172 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 TMCC2O75069 709 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 RASAL1O95294 804 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 XRCC1P18887 633 aaPredicted RBP5.4□□□□□ -1.55
PTPRD-213ENST00000537002 POLR2CP19387 275 aaPredicted RBP5.4□□□□□ -1.55
PTPRD-213ENST00000537002 IDH2P48735 452 aaKnown RBP5.4□□□□□ -1.55
PTPRD-213ENST00000537002 RAB39AQ14964 217 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 CYP2A13Q16696 494 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 FAM182AQ5T1J6 154 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 KCNT2Q6UVM3 1135 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 GALNT5Q7Z7M9 940 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 LRRC17Q8N6Y2 441 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 ZNF781Q8N8C0 355 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 OLIG1Q8TAK6 271 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 URGCPQ8TCY9 931 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 FEM1CQ96JP0 617 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 ACOX2Q99424 681 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 SPON2Q9BUD6 331 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 HERC2P3Q9BVR0 1158 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 INTS10Q9NVR2 710 aaKnown RBP5.4□□□□□ -1.55
PTPRD-213ENST00000537002 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.4□□□□□ -1.55
PTPRD-213ENST00000537002 H2AFY2Q9P0M6 372 aaPredicted RBP5.4□□□□□ -1.55
PTPRD-213ENST00000537002 OGDHLQ9ULD0 1010 aa5.4□□□□□ -1.55
PTPRD-213ENST00000537002 MYH14Q7Z406 1995 aaKnown RBP5.39□□□□□ -1.55
PTPRD-213ENST00000537002 A0A087WZ62 844 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 FAM159BA6NKW6 160 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 VPS4BO75351 444 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 TSPAN19P0C672 248 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 NCAM1P13591 858 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 NCK1P16333 377 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 CKMT2P17540 419 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 HPCAL1P37235 193 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 NDST2P52849 883 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 SIM2Q14190 667 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-213ENST00000537002 PLA2G4EQ3MJ16 856 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms