RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 RPAP3Q9H6T3 665 aaPredicted RBP5.83□□□□□ -1.48
CHD4-206ENST00000536999 RPF2Q9H7B2 306 aaKnown RBP5.83□□□□□ -1.48
CHD4-206ENST00000536999 CATSPERBQ9H7T0 1116 aa5.83□□□□□ -1.48
CHD4-206ENST00000536999 NOL11Q9H8H0 719 aaKnown RBP5.83□□□□□ -1.48
CHD4-206ENST00000536999 POLR1BQ9H9Y6 1135 aa5.83□□□□□ -1.48
CHD4-206ENST00000536999 CERS4Q9HA82 394 aa5.83□□□□□ -1.48
CHD4-206ENST00000536999 SYTL2Q9HCH5 934 aa5.83□□□□□ -1.48
CHD4-206ENST00000536999 COMMD8Q9NX08 183 aa5.83□□□□□ -1.48
CHD4-206ENST00000536999 DPP3Q9NY33 737 aa5.83□□□□□ -1.48
CHD4-206ENST00000536999 SCN3BQ9NY72 215 aa5.83□□□□□ -1.48
CHD4-206ENST00000536999 ERAP1Q9NZ08 941 aa5.83□□□□□ -1.48
CHD4-206ENST00000536999 NPAP1Q9NZP6 1156 aa5.83□□□□□ -1.48
CHD4-206ENST00000536999 FLRT1Q9NZU1 646 aa5.83□□□□□ -1.48
CHD4-206ENST00000536999 LEF1Q9UJU2 399 aaPredicted RBP5.83□□□□□ -1.48
CHD4-206ENST00000536999 SLC39A10Q9ULF5 831 aa5.83□□□□□ -1.48
CHD4-206ENST00000536999 FZD10Q9ULW2 581 aa5.83□□□□□ -1.48
CHD4-206ENST00000536999 IFT52Q9Y366 437 aa5.83□□□□□ -1.48
CHD4-206ENST00000536999 TPRKBQ9Y3C4 175 aa5.83□□□□□ -1.48
CHD4-206ENST00000536999 TSC22D4Q9Y3Q8 395 aa5.83□□□□□ -1.48
CHD4-206ENST00000536999 TRAF6Q9Y4K3 522 aa5.83□□□□□ -1.48
CHD4-206ENST00000536999 PLXNB2O15031 1838 aa5.83□□□□□ -1.48
CHD4-206ENST00000536999 A0A0G2JMZ2 1700 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 DCHS1Q96JQ0 3298 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 REV3LO60673 3130 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 ZCWPW2A0A1B0GU75 182 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 A0A1W2PP18 115 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 TTC24A2A3L6 582 aaPredicted RBP5.82□□□□□ -1.48
CHD4-206ENST00000536999 CCDC154A6NI56 674 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 EVPLLA8MZ36 301 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 TARM1B6A8C7 271 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 E7ENX8 843 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 H3BMQ9 156 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 SDHDO14521 159 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 CD3EAPO15446 510 aaKnown RBP5.82□□□□□ -1.48
CHD4-206ENST00000536999 IDH3BO43837 385 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 CACNG3O60359 315 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 MAN1A2O60476 641 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 MGEA5O60502 916 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 PEX10O60683 326 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 NDUFS2O75306 463 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 UGT2B11O75310 529 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 KRT75O95678 551 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 ALDH2P05091 517 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 ITGB3P05106 788 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 UGT2B4P06133 528 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 ENO2P09104 434 aaPredicted RBP5.82□□□□□ -1.48
CHD4-206ENST00000536999 INHBBP09529 407 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 RAP2AP10114 183 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 ERVK-10P10266 1014 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 MYOGP15173 224 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 IL9P15248 144 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 LBPP18428 481 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 CYP3A5P20815 502 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 RFC2P35250 354 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 HOXD12P35452 270 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 GRM5P41594 1212 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 GRIA3P42263 894 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 EIF2B2P49770 351 aaKnown RBP5.82□□□□□ -1.48
CHD4-206ENST00000536999 CSRP3P50461 194 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 ST13P50502 369 aaKnown RBP5.82□□□□□ -1.48
CHD4-206ENST00000536999 CCT8P50990 548 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 PKNOX1P55347 436 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 GJA9P57773 515 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 COPZ1P61923 177 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 PRAMEP78395 509 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 CCNA1P78396 465 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 MS4A2Q01362 244 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 ZNF45Q02386 682 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 GBE1Q04446 702 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 CHRNB3Q05901 458 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 NSUN2Q08J23 767 aaKnown RBP eCLIP5.82□□□□□ -1.48
CHD4-206ENST00000536999 CDC20Q12834 499 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 MAD2L1Q13257 205 aaPredicted RBP5.82□□□□□ -1.48
CHD4-206ENST00000536999 OXA1LQ15070 435 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 SLC14A2Q15849 920 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 CDO1Q16878 200 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 ZNF181Q2M3W8 571 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 KIF19Q2TAC6 998 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 GOLGA7BQ2TAP0 167 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 PLA2G4EQ3MJ16 856 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 C6orf10Q5SRN2 563 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 ZNF618Q5T7W0 954 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 KCTD11Q693B1 232 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 THOC7Q6I9Y2 204 aaKnown RBP5.82□□□□□ -1.48
CHD4-206ENST00000536999 PTCRAQ6ISU1 281 aaPredicted RBP5.82□□□□□ -1.48
CHD4-206ENST00000536999 METTL2BQ6P1Q9 378 aaKnown RBP5.82□□□□□ -1.48
CHD4-206ENST00000536999 C8orf82Q6P1X6 216 aaPredicted RBP5.82□□□□□ -1.48
CHD4-206ENST00000536999 DCLRE1AQ6PJP8 1040 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 SLC30A10Q6XR72 485 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 SCARA5Q6ZMJ2 495 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 CYP4V2Q6ZWL3 525 aaPredicted RBP5.82□□□□□ -1.48
CHD4-206ENST00000536999 C16orf59Q7L2K0 433 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 LYSMD3Q7Z3D4 306 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 DGLUCYQ7Z3D6 616 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 ANKRD13BQ86YJ7 626 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 HIPK1Q86Z02 1210 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 ADHFE1Q8IWW8 467 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 DDIASQ8IXT1 998 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 LILRA2Q8N149 483 aa5.82□□□□□ -1.48
CHD4-206ENST00000536999 ZNF567Q8N184 647 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms