RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 TMEM88Q6PEY1 159 aa5.8□□□□□ -1.48
CLIP1-207ENST00000536634 KLHL17Q6TDP4 642 aa5.8□□□□□ -1.48
CLIP1-207ENST00000536634 LRIG3Q6UXM1 1119 aa5.8□□□□□ -1.48
CLIP1-207ENST00000536634 COLCA1Q6ZS62 124 aa5.8□□□□□ -1.48
CLIP1-207ENST00000536634 CHST3Q7LGC8 479 aa5.8□□□□□ -1.48
CLIP1-207ENST00000536634 CACNA2D3Q8IZS8 1091 aa5.8□□□□□ -1.48
CLIP1-207ENST00000536634 ADSSL1Q8N142 457 aa5.8□□□□□ -1.48
CLIP1-207ENST00000536634 TMEM105Q8N8V8 129 aa5.8□□□□□ -1.48
CLIP1-207ENST00000536634 CHURC1Q8WUH1 139 aa5.8□□□□□ -1.48
CLIP1-207ENST00000536634 ADAD1Q96M93 576 aaKnown RBP5.8□□□□□ -1.48
CLIP1-207ENST00000536634 TMEM120AQ9BXJ8 343 aa5.8□□□□□ -1.48
CLIP1-207ENST00000536634 BRD8Q9H0E9 1235 aa5.8□□□□□ -1.48
CLIP1-207ENST00000536634 RANBP17Q9H2T7 1088 aaKnown RBP5.8□□□□□ -1.48
CLIP1-207ENST00000536634 IL21RQ9HBE5 538 aa5.8□□□□□ -1.48
CLIP1-207ENST00000536634 FBXO4Q9UKT5 387 aa5.8□□□□□ -1.48
CLIP1-207ENST00000536634 BARX2Q9UMQ3 279 aaPredicted RBP5.8□□□□□ -1.48
CLIP1-207ENST00000536634 LAMP3Q9UQV4 416 aa5.8□□□□□ -1.48
CLIP1-207ENST00000536634 PCDHA10Q9Y5I2 948 aa5.8□□□□□ -1.48
CLIP1-207ENST00000536634 LOC400499M0QZD8 3231 aa5.8□□□□□ -1.48
CLIP1-207ENST00000536634 FAM208BQ5VWN6 2430 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 PLXNA4Q9HCM2 1894 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 TTC3P53804 2025 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 SETXQ7Z333 2677 aaKnown RBP5.79□□□□□ -1.48
CLIP1-207ENST00000536634 LOC102724159A0A0B4J2E5 919 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 TMEM272A0A1B0GTI8 110 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 A6NNC1 897 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 RSPH10B2B2RC85 870 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 H3BNX3 289 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 RHODO00212 210 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 HAS3O00219 553 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 IPO8O15397 1037 aaKnown RBP5.79□□□□□ -1.48
CLIP1-207ENST00000536634 PRPF4O43172 522 aaKnown RBP eCLIP5.79□□□□□ -1.48
CLIP1-207ENST00000536634 TULP3O75386 442 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 NDUFB8O95169 186 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 TOMM40O96008 361 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 MMP1P03956 469 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 CYP21A2P08686 494 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 RSPH10BP0C881 870 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 ICAM3P32942 547 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 CIITAP33076 1130 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 THPOP40225 353 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 RCAN1P53805 252 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 TFAP4Q01664 338 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 COASYQ13057 564 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 BLMHQ13867 455 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 PWP2Q15269 919 aaKnown RBP5.79□□□□□ -1.48
CLIP1-207ENST00000536634 INPP5JQ15735 1006 aaPredicted RBP5.79□□□□□ -1.48
CLIP1-207ENST00000536634 ODF3L2Q3SX64 289 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 ARL13AQ5H913 290 aaPredicted RBP5.79□□□□□ -1.48
CLIP1-207ENST00000536634 PIK3CD-AS1Q5SR53 167 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 NUGGCQ68CJ6 796 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 B4GALNT4Q76KP1 1039 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 RAB11FIP2Q7L804 512 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 MYLK4Q86YV6 388 aaPredicted RBP5.79□□□□□ -1.48
CLIP1-207ENST00000536634 ERC1Q8IUD2 1116 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 ZNF444Q8N0Y2 327 aaPredicted RBP5.79□□□□□ -1.48
CLIP1-207ENST00000536634 VN1R2Q8NFZ6 395 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 SLC25A28Q96A46 364 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 RMDN1Q96DB5 314 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 RPGRIP1Q96KN7 1286 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 IFIH1Q9BYX4 1025 aaKnown RBP5.79□□□□□ -1.48
CLIP1-207ENST00000536634 MAGEH1Q9H213 219 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 ELAC1Q9H777 363 aaKnown RBP5.79□□□□□ -1.48
CLIP1-207ENST00000536634 GRHPRQ9UBQ7 328 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 SQORQ9Y6N5 450 aa5.79□□□□□ -1.48
CLIP1-207ENST00000536634 IGLV5-39A0A0G2JS06 123 aa5.78□□□□□ -1.48
CLIP1-207ENST00000536634 DPPA5A6NC42 116 aa5.78□□□□□ -1.48
CLIP1-207ENST00000536634 GPAA1O43292 621 aa5.78□□□□□ -1.48
CLIP1-207ENST00000536634 NFATC1O95644 943 aa5.78□□□□□ -1.48
CLIP1-207ENST00000536634 GH1P01241 217 aa5.78□□□□□ -1.48
CLIP1-207ENST00000536634 RB1P06400 928 aa5.78□□□□□ -1.48
CLIP1-207ENST00000536634 TSPY3P0CV98 308 aa5.78□□□□□ -1.48
CLIP1-207ENST00000536634 TSPY8P0CW00 308 aa5.78□□□□□ -1.48
CLIP1-207ENST00000536634 CHRNB1P11230 501 aa5.78□□□□□ -1.48
CLIP1-207ENST00000536634 CASTP20810 708 aaKnown RBP5.78□□□□□ -1.48
CLIP1-207ENST00000536634 SP100P23497 879 aaPredicted RBP5.78□□□□□ -1.48
CLIP1-207ENST00000536634 TDO2P48775 406 aa5.78□□□□□ -1.48
CLIP1-207ENST00000536634 CCDC96Q2M329 555 aa5.78□□□□□ -1.48
CLIP1-207ENST00000536634 CCDC38Q502W7 563 aa5.78□□□□□ -1.48
CLIP1-207ENST00000536634 MANEAQ5SRI9 462 aa5.78□□□□□ -1.48
CLIP1-207ENST00000536634 LCE1AQ5T7P2 110 aa5.78□□□□□ -1.48
CLIP1-207ENST00000536634 SEPT14Q6ZU15 432 aa5.78□□□□□ -1.48
CLIP1-207ENST00000536634 SERINC5Q86VE9 423 aa5.78□□□□□ -1.48
CLIP1-207ENST00000536634 ITPRIPQ8IWB1 547 aa5.78□□□□□ -1.48
CLIP1-207ENST00000536634 SUSD6Q92537 303 aa5.78□□□□□ -1.48
CLIP1-207ENST00000536634 PHF7Q9BWX1 381 aaPredicted RBP5.78□□□□□ -1.48
CLIP1-207ENST00000536634 LMAN2LQ9H0V9 348 aa5.78□□□□□ -1.48
CLIP1-207ENST00000536634 SPAG4Q9NPE6 437 aa5.78□□□□□ -1.48
CLIP1-207ENST00000536634 STX8Q9UNK0 236 aa5.78□□□□□ -1.48
CLIP1-207ENST00000536634 C19orf53Q9UNZ5 99 aaPredicted RBP5.78□□□□□ -1.48
CLIP1-207ENST00000536634 RCE1Q9Y256 329 aa5.78□□□□□ -1.48
CLIP1-207ENST00000536634 ADGRA3Q8IWK6 1321 aa5.77□□□□□ -1.49
CLIP1-207ENST00000536634 LAMA1P25391 3075 aa5.77□□□□□ -1.49
CLIP1-207ENST00000536634 EFCAB8A8MWE9 144 aa5.77□□□□□ -1.49
CLIP1-207ENST00000536634 B4DGG1 531 aa5.77□□□□□ -1.49
CLIP1-207ENST00000536634 MCIDASD6RGH6 385 aa5.77□□□□□ -1.49
CLIP1-207ENST00000536634 HOXC8P31273 242 aa5.77□□□□□ -1.49
CLIP1-207ENST00000536634 NRIP1P48552 1158 aa5.77□□□□□ -1.49
CLIP1-207ENST00000536634 POLGP54098 1239 aaPredicted RBP5.77□□□□□ -1.49
CLIP1-207ENST00000536634 ADPRHP54922 357 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms